BOLD fMRI using a modified HASTE sequence

NeuroImage

Volumn 49, Issue 1, 2010, Pages 457-466

  Ye, Yongquan ^a,b   Zhuo, Yan ^a,b   Xue, Rong ^a,b   Zhou, Xiaohong Joe ^c,d  

^a UNIVERSITY OF CHINESE ACADEMY OF SCIENCES   (China)

^b Beijing MRI Center for Brain Research   (China)

^c UNIVERSITY OF ILLINOIS AT CHICAGO   (United States)

^d University of Illinois at Chicago   (United States)

Author keywords

BOLD; Functional MRI; GRAPPA; Neuronal localization; Turbo spin echo

Indexed keywords

ADULT; ARTICLE; BRAIN MICROCIRCULATION; CONTROLLED STUDY; ECHO PLANAR IMAGING; FEMALE; FUNCTIONAL MAGNETIC RESONANCE IMAGING; HUMAN; HUMAN EXPERIMENT; MALE; NORMAL HUMAN; OXYGEN BLOOD LEVEL; PRIORITY JOURNAL; PROCESS OPTIMIZATION; SENSITIVITY AND SPECIFICITY; SIGNAL NOISE RATIO; SIGNAL PROCESSING; VISUAL CORTEX; VISUAL STIMULATION;

ADULT; ALGORITHMS; DATA INTERPRETATION, STATISTICAL; ECHO-PLANAR IMAGING; FEMALE; FOURIER ANALYSIS; HUMANS; IMAGE PROCESSING, COMPUTER-ASSISTED; MAGNETIC RESONANCE IMAGING; MALE; OXYGEN; SOFTWARE; YOUNG ADULT;

EID: 70349968046     PISSN: 10538119     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.neuroimage.2009.07.044     Document Type: Article

References (50)

1. Bandettini P.A., Wong E.C., Jesmanowicz A., Hinks R.S., and Hyde J.S. Spin-echo and gradient-echo EPI of human brain activation using BOLD contrast: a comparative study at 1.5 T. NMR Biomed. 7 (1994) 12-20
2. Boxerman J.L., Bandettini P.A., Kwong K.K., Baker J.R., Davis T.L., Rosen B.R., and Weisskoff R.M. The intravascular contribution to fMRI signal change: Monte Carlo modeling and diffusion-weighted studies in vivo. Magn. Reson. Med. 34 (1995) 4-10
3. Bryant R.G., Marill K., Blackmore C., and Francis C. Magnetic relaxation in blood and blood clots. Magn. Reson. Med. 13 (1990) 133-144
4. Clingman C.S., Silvennoinen M.J., Golay X., Kauppinen R.A., and van Zijl P.C. Intravascular BOLD transverse relaxation: exchange vs. diffusion through field gradients. Proc. 11th Annual Meeting ISMRM, Toronto (2003) P219
5. Constable R.T., Kennan R.P., Puce A., McCarthy G., and Gore J.C. Functional NMR imaging using fast spin echo at 1.5 T. Magn. Reson. Med. 31 (1994) 686-690
6. Duong T.Q., Yacoub E., Adriany G., Hu X., Ugurbil K., and Kim S.G. Microvascular BOLD contribution at 4 and 7 T in the human brain: gradient-echo and spin-echo fMRI with suppression of blood effects. Magn. Reson. Med. 49 (2003) 1019-1027
7. Duong T.Q., Yacoub E., Adriany G., Hu X., Ugurbil K., Vaughan J.T., Merkle H., and Kim S.G. High-resolution, spin-echo BOLD, and CBF fMRI at 4 and 7 T. Magn. Reson. Med. 48 (2002) 589-593
8. Duyn J.H., Moonen C.T., van Yperen G.H., de Boer R.W., and Luyten P.R. Inflow versus deoxyhemoglobin effects in BOLD functional MRI using gradient echoes at 1.5 T. NMR Biomed. 7 (1994) 83-88
9. Friston K.J. Statistical Parametric Mapping : the Analysis of Functional Brain Images (2007), Elsevier/Academic Press, Amsterdam; Boston
10. Fujita N. Extravascular contribution of blood oxygenation level-dependent signal changes: a numerical analysis based on a vascular network model. Magn. Reson. Med. 46 (2001) 723-734
11. Gao J.H., Xiong J., Li J., Schiff J., Roby J., Lancaster J.L., and Fox P.T. Fast spin-echo characteristics of visual stimulation-induced signal changes in the human brain. J. Magn. Reson. Imaging 5 (1995) 709-714
12. Griswold M.A., Jakob P.M., Heidemann R.M., Nittka M., Jellus V., Wang J., Kiefer B., and Haase A. Generalized autocalibrating partially parallel acquisitions (GRAPPA). Magn. Reson. Med. 47 (2002) 1202-1210
13. Hennig J., and Scheffler K. Easy improvement of signal-to-noise in RARE-sequences with low refocusing flip angles. Rapid acquisition with relaxation enhancement. Magn. Reson. Med. 44 (2000) 983-985
14. Jochimsen T.H., Norris D.G., Mildner T., and Moller H.E. Quantifying the intra- and extravascular contributions to spin-echo fMRI at 3 T. Magn. Reson. Med. 52 (2004) 724-732
15. Jones R.A., Schirmer T., Lipinski B., Elbel G.K., and Auer D.P. Signal undershoots following visual stimulation: a comparison of gradient and spin-echo BOLD sequences. Magn. Reson. Med. 40 (1998) 112-118
16. Kim S.G., Hendrich K., Hu X., Merkle H., and Ugurbil K. Potential pitfalls of functional MRI using conventional gradient-recalled echo techniques. NMR Biomed. 7 (1994) 69-74
17. Koshimoto Y., Yamada H., Kimura H., Maeda M., Tsuchida C., Kawamura Y., and Ishii Y. Quantitative analysis of cerebral microvascular hemodynamics with T2-weighted dynamic MR imaging. J. Magn. Reson. Imaging 9 (1999) 462-467
18. Kwong K.K., Belliveau J.W., Chesler D.A., Goldberg I.E., Weisskoff R.M., Poncelet B.P., Kennedy D.N., Hoppel B.E., Cohen M.S., Turner R., et al. Dynamic magnetic resonance imaging of human brain activity during primary sensory stimulation. Proc. Natl. Acad. Sci. U. S. A. 89 (1992) 5675-5679
19. Lai S., Hopkins A.L., Haacke E.M., Li D., Wasserman B.A., Buckley P., Friedman L., Meltzer H., Hedera P., and Friedland R. Identification of vascular structures as a major source of signal contrast in high resolution 2D and 3D functional activation imaging of the motor cortex at 1.5 T: preliminary results. Magn. Reson. Med. 30 (1993) 387-392
20. Lee A.T., Glover G.H., and Meyer C.H. Discrimination of large venous vessels in time-course spiral blood-oxygen-level-dependent magnetic-resonance functional neuroimaging. Magn. Reson. Med. 33 (1995) 745-754
21. Leenders K.L., Perani D., Lammertsma A.A., Heather J.D., Buckingham P., Healy M.J., Gibbs J.M., Wise R.J., Hatazawa J., Herold S., et al. Cerebral blood flow, blood volume and oxygen utilization. Normal values and effect of age. Brain 113 Pt 1 (1990) 27-47
22. Lowe M.J., Lurito J.T., Mathews V.P., Phillips M.D., and Hutchins G.D. Quantitative comparison of functional contrast from BOLD-weighted spin-echo and gradient-echo echoplanar imaging at 1.5 Tesla and H2 15O PET in the whole brain. J. Cereb. Blood Flow Metab. 20 (2000) 1331-1340
23. Menon R.S. Postacquisition suppression of large-vessel BOLD signals in high-resolution fMRI. Magn. Reson. Med. 47 (2002) 1-9
24. Niendorf T. On the application of susceptibility-weighted ultra-fast low-angle RARE experiments in functional MR imaging. Magn. Reson. Med. 41 (1999) 1189-1198
25. Norris D., and Bornert P. Coherence and interference in ultrafast RARE experiments. J. Magn. Reson. A. 105 (1993) 123-127
26. Norris D.G. Selective parity RARE imaging. Magn. Reson. Med. 58 (2007) 643-649
27. Norris D.G., Hoehn-Berlage M., Wittlich F., Back T., and Leibfritz D. Dynamic imaging with T2* contrast using U-FLARE. Magn. Reson. Imaging 11 (1993) 921-924
28. Norris D.G., Zysset S., Mildner T., and Wiggins C.J. An investigation of the value of spin-echo-based fMRI using a Stroop color-word matching task and EPI at 3 T. NeuroImage 15 (2002) 719-726
29. Ogawa S., and Lee T.M. Magnetic resonance imaging of blood vessels at high fields: in vivo and in vitro measurements and image simulation. Magn. Reson. Med. 16 (1990) 9-18
30. Ogawa S., Tank D.W., Menon R.S., Ellermann J.M., Kim S.G., Merkle H., and Ugurbil K. Intrinsic signal changes accompanying sensory stimulation: functional brain mapping with magnetic resonance imaging. Proc. Natl. Acad. Sci. 89 (1992) 5951-5955
31. Ogawa S., Menon R.S., Tank D.W., Kim S.G., Merkle H., Ellermann J.M., and Ugurbil K. Functional brain mapping by blood oxygenation level-dependent contrast magnetic resonance imaging. A comparison of signal characteristics with a biophysical model. Biophys. J. 64 (1993) 803-812
32. Oja J.M., Gillen J., Kauppinen R.A., Kraut M., and van Zijl P.C. Venous blood effects in spin-echo fMRI of human brain. Magn. Reson. Med. 42 (1999) 617-626
33. Parkes L.M., Schwarzbach J.V., Bouts A.A., Deckers R.H., Pullens P., Kerskens C.M., and Norris D.G. Quantifying the spatial resolution of the gradient echo and spin echo BOLD response at 3 Tesla. Magn. Reson. Med. 54 (2005) 1465-1472
34. Poser B.A., and Norris D.G. Fast spin echo sequences for BOLD functional MRI. Magma 20 (2007) 11-17
35. Poser B.A., and Norris D.G. Measurement of activation-related changes in cerebral blood volume: VASO with single-shot HASTE acquisition. Magma 20 (2007) 63-67
36. Preibisch C., Wallenhorst T., Heidemann R., Zanella F.E., and Lanfermann H. Comparison of parallel acquisition techniques generalized autocalibrating partially parallel acquisitions (GRAPPA) and modified sensitivity encoding (mSENSE) in functional MRI (fMRI) at 3 T. J. Magn. Reson. Imaging 27 (2008) 590-598
37. Pruessmann K.P., Weiger M., Scheidegger M.B., and Boesiger P. SENSE: sensitivity encoding for fast MRI. Magn. Reson. Med. 42 (1999) 952-962
38. Segebarth C., Belle V., Delon C., Massarelli R., Decety J., Le Bas J.F., Decorps M., and Benabid A.L. Functional MRI of the human brain: predominance of signals from extracerebral veins. NeuroReport 5 (1994) 813-816
39. Stroman P.W., Krause V., Malisza K.L., Frankenstein U.N., and Tomanek B. Characterization of contrast changes in functional MRI of the human spinal cord at 1.5 T. Magn. Reson. Imaging 19 (2001) 833-838
40. Stroman P.W., Krause V., Malisza K.L., Frankenstein U.N., and Tomanek B. Extravascular proton-density changes as a non-BOLD component of contrast in fMRI of the human spinal cord. Magn. Reson. Med. 48 (2002) 122-127
41. Thulborn K.R., Chang S.Y., Shen G.X., and Voyvodic J.T. High-resolution echo-planar fMRI of human visual cortex at 3.0 Tesla. NMR Biomed. 10 (1997) 183-190
42. Thunberg P., and Zetterberg P. Noise distribution in SENSE- and GRAPPA-reconstructed images: a computer simulation study. Magn. Reson. Imaging 25 (2007) 1089-1094
43. Ugurbil K., Adriany G., Andersen P., Chen W., Gruetter R., Hu X., Merkle H., Kim D.S., Kim S.G., Strupp J., Zhu X.H., and Ogawa S. Magnetic resonance studies of brain function and neurochemistry. Annu. Rev. Biomed. Eng. 2 (2000) 633-660
44. Ugurbil K., Adriany G., Andersen P., Chen W., Garwood M., Gruetter R., Henry P.G., Kim S.G., Lieu H., Tkac I., Vaughan T., Van De Moortele P.F., Yacoub E., and Zhu X.H. Ultrahigh field magnetic resonance imaging and spectroscopy. Magn. Reson. Imaging 21 (2003) 1263-1281
45. van Zijl P.C., Eleff S.M., Ulatowski J.A., Oja J.M., Ulug A.M., Traystman R.J., and Kauppinen R.A. Quantitative assessment of blood flow, blood volume and blood oxygenation effects in functional magnetic resonance imaging. Nat. Med. 4 (1998) 159-167
46. Warnking J., Dojat M., Guerin-Dugue A., Delon-Martin C., Olympieff S., Richard N., Chehikian A., and Segebarth C. FMRI retinotopic mapping-step by step. NeuroImage 17 4 (2002) 1665-1683
47. Williams C.F., Redpath T.W., and Smith F.W. The influence of stimulated echoes on contrast in fast spin-echo imaging. Magn. Reson. Imaging 14 (1996) 419-428
48. Yacoub E., Duong T.Q., Van De Moortele P.F., Lindquist M., Adriany G., Kim S.G., Ugurbil K., and Hu X. Spin-echo fMRI in humans using high spatial resolutions and high magnetic fields. Magn. Reson. Med. 49 (2003) 655-664
49. Yacoub E., Van De Moortele P.F., Shmuel A., and Ugurbil K. Signal and noise characteristics of Hahn SE and GE BOLD fMRI at 7 T in humans. NeuroImage 24 (2005) 738-750
50. Zhao F., Wang P., and Kim S.G. Cortical depth-dependent gradient-echo and spin-echo BOLD fMRI at 9.4 T. Magn. Reson. Med. 51 (2004) 518-524