-
1
-
-
57649114800
-
Major gradients in putatively nitrifying and non-nitrifying Archaea in the deep North Atlantic
-
Agogue H, Brink M, Dinasquet J Herndl GJ (2008) Major gradients in putatively nitrifying and non-nitrifying Archaea in the deep North Atlantic. Nature 456 : 788 791.
-
(2008)
Nature
, vol.456
, pp. 788-791
-
-
Agogue, H.1
Brink, M.2
Dinasquet, J.3
Herndl, G.J.4
-
2
-
-
0142040853
-
Patterns of community change among ammonia oxidizers in meadow soils upon long-term incubation at different temperatures
-
Avrhami S Conrad R (2003) Patterns of community change among ammonia oxidizers in meadow soils upon long-term incubation at different temperatures. Appl Environ Microb 69 : 6152 6164.
-
(2003)
Appl Environ Microb
, vol.69
, pp. 6152-6164
-
-
Avrhami, S.1
Conrad, R.2
-
3
-
-
29144510139
-
Cold-temperate climate: A factor for selection of ammonia oxidizers in upland soil?
-
Avrahami S Conrad R (2005) Cold-temperate climate: a factor for selection of ammonia oxidizers in upland soil? Can J Microbiol 51 : 709 714.
-
(2005)
Can J Microbiol
, vol.51
, pp. 709-714
-
-
Avrahami, S.1
Conrad, R.2
-
4
-
-
0036840895
-
2O release and on the community structure of ammonia oxidizers and denitrifiers
-
2O release and on the community structure of ammonia oxidizers and denitrifiers. Appl Environ Microb 68 : 5685 5692.
-
(2002)
Appl Environ Microb
, vol.68
, pp. 5685-5692
-
-
Avrahami, S.1
Conrad, R.2
Braker, G.3
-
5
-
-
0042197522
-
Effects of temperature and fertilizer on activity and community structure of soil ammonia oxidizers
-
Avrahami S, Liesack W Conrad R (2003) Effects of temperature and fertilizer on activity and community structure of soil ammonia oxidizers. Environ Microbiol 5 : 691 705.
-
(2003)
Environ Microbiol
, vol.5
, pp. 691-705
-
-
Avrahami, S.1
Liesack, W.2
Conrad, R.3
-
6
-
-
85100420477
-
Nitrogen - Total
-
Sparks, D.L.*et al. eds), pp. Soil Science Society of America, American Society of Agronomy. Madison, WI.
-
Bremner JM (1996) Nitrogen - total. Methods of Soil Analysis: Part 3 - Chemical Methods, Vol. 37 (Sparks DL et al., eds), pp. 1085 1121. Soil Science Society of America, American Society of Agronomy, Madison, WI.
-
(1996)
Methods of Soil Analysis: Part 3 - Chemical Methods
, vol.37
, pp. 1085-1121
-
-
Bremner, J.M.1
-
7
-
-
0029669071
-
Microbial activity under alpine snow packs, Niwot Ridge, Colorado
-
Brooks PD, Williams MW Schmidt SK (1996) Microbial activity under alpine snow packs, Niwot Ridge, Colorado. Biogeochemistry 32 : 93 113.
-
(1996)
Biogeochemistry
, vol.32
, pp. 93-113
-
-
Brooks, P.D.1
Williams, M.W.2
Schmidt, S.K.3
-
8
-
-
35948999268
-
Ammonia oxidation and ammonia-oxidizing bacteria and archaea from estuaries with differing histories of hypoxia
-
Caffrey JM, Bano N, Kalanetra K Hollibaugh JT (2007) Ammonia oxidation and ammonia-oxidizing bacteria and archaea from estuaries with differing histories of hypoxia. ISME J 1 : 660 662.
-
(2007)
ISME J
, vol.1
, pp. 660-662
-
-
Caffrey, J.M.1
Bano, N.2
Kalanetra, K.3
Hollibaugh, J.T.4
-
9
-
-
58149332207
-
Ammonia-oxidizing archaea: Important players in paddy rhizosphere soil?
-
Chen XP, Zhu YG, Xia Y, Shen JP He JZ (2008) Ammonia-oxidizing archaea: important players in paddy rhizosphere soil? Environ Microbiol 10 : 1978 1987.
-
(2008)
Environ Microbiol
, vol.10
, pp. 1978-1987
-
-
Chen, X.P.1
Zhu, Y.G.2
Xia, Y.3
Shen, J.P.4
He, J.Z.5
-
10
-
-
0036947129
-
Incorporation of DNA and protein precursors into macromolecules by bacteria at -15 degrees C
-
Christner BC (2002) Incorporation of DNA and protein precursors into macromolecules by bacteria at -15 degrees C. Appl Environ Microb 68 : 6435 6438.
-
(2002)
Appl Environ Microb
, vol.68
, pp. 6435-6438
-
-
Christner, B.C.1
-
11
-
-
0028850997
-
Microbial activity of tundra and taiga soils at subzero temperatures
-
Clein JS Schimel JP (1995) Microbial activity of tundra and taiga soils at subzero temperatures. Soil Biol Biochem 27 : 1231 1234.
-
(1995)
Soil Biol Biochem
, vol.27
, pp. 1231-1234
-
-
Clein, J.S.1
Schimel, J.P.2
-
12
-
-
70149118163
-
Nitrification driven by bacteria and not archaea in nitrogen-rich grassland soils
-
Di HJ, Cameron KC, Shen JP, Winefield CS, O'Callaghan M, Bowatte S He JZ (2009) Nitrification driven by bacteria and not archaea in nitrogen-rich grassland soils. Nature Geoscience 2 : 621 624.
-
(2009)
Nature Geoscience
, vol.2
, pp. 621-624
-
-
Di, H.J.1
Cameron, K.C.2
Shen, J.P.3
Winefield, C.S.4
O'Callaghan, M.5
Bowatte, S.6
He, J.Z.7
-
13
-
-
26844541457
-
Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean
-
Francis CA, Roberts KJ, Beman JM, Santoro AE Oakley BB (2005) Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean. P Natl Acad Sci USA 102 : 14683 14688.
-
(2005)
P Natl Acad Sci USA
, vol.102
, pp. 14683-14688
-
-
Francis, C.A.1
Roberts, K.J.2
Beman, J.M.3
Santoro, A.E.4
Oakley, B.B.5
-
14
-
-
0031459101
-
Elevation dependency of the surface climate change signal: A model study
-
Giorgi F, Hurrell JW, Marinucci MR Beniston M (1997) Elevation dependency of the surface climate change signal: a model study. J Climate 10 : 288 296.
-
(1997)
J Climate
, vol.10
, pp. 288-296
-
-
Giorgi, F.1
Hurrell, J.W.2
Marinucci, M.R.3
Beniston, M.4
-
15
-
-
40549127742
-
Changes in bacterial and archaeal community structure and functional diversity along a geochemically variable soil profile
-
Hansel CM, Fendorf S, Jardine PM Francis CA (2008) Changes in bacterial and archaeal community structure and functional diversity along a geochemically variable soil profile. Appl Environ Microb 74 : 1620 1633.
-
(2008)
Appl Environ Microb
, vol.74
, pp. 1620-1633
-
-
Hansel, C.M.1
Fendorf, S.2
Jardine, P.M.3
Francis, C.A.4
-
16
-
-
41149153310
-
A moderately thermophilic ammonia-oxidizing crenarchaeote from a hot spring
-
Hatzenpichler R, Lebecleva EV, Spieck E, Stoecker K, Richter A, Daims H Wagner M (2008) A moderately thermophilic ammonia-oxidizing crenarchaeote from a hot spring. P Natl Acad Sci USA 105 : 2134 2139.
-
(2008)
P Natl Acad Sci USA
, vol.105
, pp. 2134-2139
-
-
Hatzenpichler, R.1
Lebecleva, E.V.2
Spieck, E.3
Stoecker, K.4
Richter, A.5
Daims, H.6
Wagner, M.7
-
17
-
-
24344487936
-
Plant invasion alters nitrogen cycling by modifying the soil nitrifying community
-
Hawkes CV, Wren IF, Herman DJ Firestone MK (2005) Plant invasion alters nitrogen cycling by modifying the soil nitrifying community. Ecol Lett 8 : 976 985.
-
(2005)
Ecol Lett
, vol.8
, pp. 976-985
-
-
Hawkes, C.V.1
Wren, I.F.2
Herman, D.J.3
Firestone, M.K.4
-
18
-
-
34547686149
-
Quantitative analyses of the abundance and composition of ammonia-oxidizing bacteria and ammonia-oxidizing archaea of a Chinese upland red soil under long-term fertilization practices
-
He JZ, Shen JP, Zhang LM, Zhu YG, Zheng YM, Xu MG Di H (2007) Quantitative analyses of the abundance and composition of ammonia-oxidizing bacteria and ammonia-oxidizing archaea of a Chinese upland red soil under long-term fertilization practices. Environ Microbiol 9 : 2364 2374.
-
(2007)
Environ Microbiol
, vol.9
, pp. 2364-2374
-
-
He, J.Z.1
Shen, J.P.2
Zhang, L.M.3
Zhu, Y.G.4
Zheng, Y.M.5
Xu, M.G.6
Di, H.7
-
20
-
-
62149133542
-
Diversity and abundance of ammonia-oxidizing archaea and bacteria in Qinghai Lake, northwestern China
-
Jiang H, Dong H, Yu B, Lv G, Deng S, Berzins N Dai M (2009) Diversity and abundance of ammonia-oxidizing archaea and bacteria in Qinghai Lake, northwestern China. Geomicrobiol J 26 : 199 211.
-
(2009)
Geomicrobiol J
, vol.26
, pp. 199-211
-
-
Jiang, H.1
Dong, H.2
Yu, B.3
Lv, G.4
Deng, S.5
Berzins, N.6
Dai, M.7
-
21
-
-
0000028581
-
A new marine ammonium-oxidizing bacterium, Nitrosomonas-cryotolerans Sp-Nov
-
Jones RD, Morita RY, Koops HP Watson SW (1988) A new marine ammonium-oxidizing bacterium, Nitrosomonas-cryotolerans Sp-Nov. Can J Microbiol 34 : 1122 1128.
-
(1988)
Can J Microbiol
, vol.34
, pp. 1122-1128
-
-
Jones, R.D.1
Morita, R.Y.2
Koops, H.P.3
Watson, S.W.4
-
22
-
-
25644435673
-
Isolation of an autotrophic ammonia-oxidizing marine archaeon
-
Könneke M, Bernhard AE, de la Torre JR, Walker CB, Waterbury JB Stahl DA (2005) Isolation of an autotrophic ammonia-oxidizing marine archaeon. Nature 437 : 543 546.
-
(2005)
Nature
, vol.437
, pp. 543-546
-
-
Könneke, M.1
Bernhard, A.E.2
De La Torre, J.R.3
Walker, C.B.4
Waterbury, J.B.5
Stahl, D.A.6
-
23
-
-
34249862426
-
Linking crenarchaeal and bacterial nitrification to anammox in the Black Sea
-
Lam P, Jensen MM, Lavik G, McGinnis DF, Muller B, Schubert CJ, Amann R, Thamdrup B Kuypers MMM (2007) Linking crenarchaeal and bacterial nitrification to anammox in the Black Sea. P Natl Acad Sci USA 104 : 7104 7109.
-
(2007)
P Natl Acad Sci USA
, vol.104
, pp. 7104-7109
-
-
Lam, P.1
Jensen, M.M.2
Lavik, G.3
McGinnis, D.F.4
Muller, B.5
Schubert, C.J.6
Amann, R.7
Thamdrup, B.8
Kuypers, M.M.M.9
-
24
-
-
33747479446
-
Archaea predominate among ammonia-oxidizing prokaryotes in soils
-
Leininger S, Urich T, Schloter M, Schwark L, Qi J, Nicol GW, Prosser JI, Schuster SC Schleper C (2006) Archaea predominate among ammonia-oxidizing prokaryotes in soils. Nature 442 : 806 809.
-
(2006)
Nature
, vol.442
, pp. 806-809
-
-
Leininger, S.1
Urich, T.2
Schloter, M.3
Schwark, L.4
Qi, J.5
Nicol, G.W.6
Prosser, J.I.7
Schuster, S.C.8
Schleper, C.9
-
25
-
-
0032839952
-
Links between microbial population dynamics and nitrogen availability in an alpine ecosystem
-
Lipson DA, Schmidt SK Monson RK (1999) Links between microbial population dynamics and nitrogen availability in an alpine ecosystem. Ecology 80 : 1623 1631.
-
(1999)
Ecology
, vol.80
, pp. 1623-1631
-
-
Lipson, D.A.1
Schmidt, S.K.2
Monson, R.K.3
-
26
-
-
34247847886
-
Quantitative distribution of presumptive archaeal and bacterial nitrifiers in Monterey Bay and the North Pacific Subtropical Gyre
-
Mincer TJ, Church MJ, Taylor LT, Preston C, Kar DM DeLong EF (2007) Quantitative distribution of presumptive archaeal and bacterial nitrifiers in Monterey Bay and the North Pacific Subtropical Gyre. Environ Microbiol 9 : 1162 1175.
-
(2007)
Environ Microbiol
, vol.9
, pp. 1162-1175
-
-
Mincer, T.J.1
Church, M.J.2
Taylor, L.T.3
Preston, C.4
Kar, D.M.5
Delong, E.F.6
-
27
-
-
52949134066
-
Relative abundance and diversity of ammonia-oxidizing archaea and bacteria in the San Francisco Bay estuary
-
Mosier AC Francis CA (2008) Relative abundance and diversity of ammonia-oxidizing archaea and bacteria in the San Francisco Bay estuary. Environ Microbiol 10 : 3002 3016.
-
(2008)
Environ Microbiol
, vol.10
, pp. 3002-3016
-
-
Mosier, A.C.1
Francis, C.A.2
-
28
-
-
52949137846
-
The influence of soil pH on the diversity, abundance and transcriptional activity of ammonia oxidizing archaea and bacteria
-
Nicol GW, Leininger S, Schleper C Prosser JI (2008) The influence of soil pH on the diversity, abundance and transcriptional activity of ammonia oxidizing archaea and bacteria. Environ Microbiol 10 : 2966 2978.
-
(2008)
Environ Microbiol
, vol.10
, pp. 2966-2978
-
-
Nicol, G.W.1
Leininger, S.2
Schleper, C.3
Prosser, J.I.4
-
29
-
-
33747341311
-
Occurrence of ammonia-oxidizing archaea in wastewater treatment plant bioreactors
-
Park HD, Wells GF, Bae H, Criddle CS Francis CA (2006) Occurrence of ammonia-oxidizing archaea in wastewater treatment plant bioreactors. Appl Environ Microb 72 : 5643 5647.
-
(2006)
Appl Environ Microb
, vol.72
, pp. 5643-5647
-
-
Park, H.D.1
Wells, G.F.2
Bae, H.3
Criddle, C.S.4
Francis, C.A.5
-
30
-
-
52949113790
-
Relative contributions of archaea and bacteria to aerobic ammonia oxidation in the environment
-
Prosser JI Nicol GW (2008) Relative contributions of archaea and bacteria to aerobic ammonia oxidation in the environment. Environ Microbiol 10 : 2931 2941.
-
(2008)
Environ Microbiol
, vol.10
, pp. 2931-2941
-
-
Prosser, J.I.1
Nicol, G.W.2
-
31
-
-
42149138713
-
Nitrification in terrestrial hot springs of Iceland and Kamchatka
-
Reigstad LJ, Richter A, Daims H, Urich T, Schwark L Schleper C (2008) Nitrification in terrestrial hot springs of Iceland and Kamchatka. FEMS Microbiol Ecol 64 : 167 174.
-
(2008)
FEMS Microbiol Ecol
, vol.64
, pp. 167-174
-
-
Reigstad, L.J.1
Richter, A.2
Daims, H.3
Urich, T.4
Schwark, L.5
Schleper, C.6
-
32
-
-
0030814870
-
The ammonia monooxygenase structural gene amoA as a functional marker: Molecular fine-scale analysis of natural ammonia-oxidizing populations
-
Rotthauwe JH, Witzel KP Liesack W (1997) The ammonia monooxygenase structural gene amoA as a functional marker: molecular fine-scale analysis of natural ammonia-oxidizing populations. Appl Environ Microb 63 : 4704 4712.
-
(1997)
Appl Environ Microb
, vol.63
, pp. 4704-4712
-
-
Rotthauwe, J.H.1
Witzel, K.P.2
Liesack, W.3
-
33
-
-
40949097432
-
Shifts in the relative abundance of ammonia-oxidizing bacteria and archaea across physicochemical gradients in a subterranean estuary
-
Santoro AE, Francis CA, de Sieyes NR Boehm AB (2008) Shifts in the relative abundance of ammonia-oxidizing bacteria and archaea across physicochemical gradients in a subterranean estuary. Environ Microbiol 10 : 1068 1079.
-
(2008)
Environ Microbiol
, vol.10
, pp. 1068-1079
-
-
Santoro, A.E.1
Francis, C.A.2
De Sieyes, N.R.3
Boehm, A.B.4
-
34
-
-
43449114462
-
Abundance and composition of ammonia-oxidizing bacteria and ammonia-oxidizing archaea communities of an alkaline sandy loam
-
Shen JP, Zhang LM, Zhu YG, Zhang JB He JZ (2008) Abundance and composition of ammonia-oxidizing bacteria and ammonia-oxidizing archaea communities of an alkaline sandy loam. Environ Microbiol 10 : 1601 1611.
-
(2008)
Environ Microbiol
, vol.10
, pp. 1601-1611
-
-
Shen, J.P.1
Zhang, L.M.2
Zhu, Y.G.3
Zhang, J.B.4
He, J.Z.5
-
35
-
-
0027437113
-
2O flux through a Wyoming snowpack and implications for global budgets
-
2O flux through a Wyoming snowpack and implications for global budgets. Nature 361 : 140 142.
-
(1993)
Nature
, vol.361
, pp. 140-142
-
-
Sommerfeld, R.A.1
Mosier, A.R.2
Musselman, R.C.3
-
36
-
-
34547781750
-
MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0
-
Tamura K, Dudley J, Nei M Kumar S (2007) MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24 : 1596 1599.
-
(2007)
Mol Biol Evol
, vol.24
, pp. 1596-1599
-
-
Tamura, K.1
Dudley, J.2
Nei, M.3
Kumar, S.4
-
37
-
-
41849095617
-
Growth, activity and temperature responses of ammonia-oxidizing archaea and bacteria in soil microcosms
-
Tourna M, Freitag TE, Nicol GW Prosser JI (2008) Growth, activity and temperature responses of ammonia-oxidizing archaea and bacteria in soil microcosms. Environ Microbiol 10 : 1357 1364.
-
(2008)
Environ Microbiol
, vol.10
, pp. 1357-1364
-
-
Tourna, M.1
Freitag, T.E.2
Nicol, G.W.3
Prosser, J.I.4
-
38
-
-
28644435323
-
Novel genes for nitrite reductase and Amo-related proteins indicate a role of uncultivated mesophilic crenarchaeota in nitrogen cycling
-
Treusch AH, Leininger S, Kletzin A, Schuster SC, Klenk HP Schleper C (2005) Novel genes for nitrite reductase and Amo-related proteins indicate a role of uncultivated mesophilic crenarchaeota in nitrogen cycling. Environ Microbiol 7 : 1985 1995.
-
(2005)
Environ Microbiol
, vol.7
, pp. 1985-1995
-
-
Treusch, A.H.1
Leininger, S.2
Kletzin, A.3
Schuster, S.C.4
Klenk, H.P.5
Schleper, C.6
-
39
-
-
11144354360
-
Environmental genome shotgun sequencing of the Sargasso Sea
-
Venter JC, Remington K, Heidelberg JF et al 2004) Environmental genome shotgun sequencing of the Sargasso Sea. Science 304 : 66 74.
-
(2004)
Science
, vol.304
, pp. 66-74
-
-
Venter, J.C.1
Remington, K.2
Heidelberg, J.F.3
Al, E.4
-
40
-
-
33846134052
-
Communities of Archaea and Bacteria in a subsurface radioactive thermal spring in the Austrian Central Alps, and evidence of ammonia-oxidizing Crenarchaeota
-
Weidler GW, Dornmayr-Pfaffenhuemer M, Gerbl FW, Heinen W Stan-Lotter H (2007) Communities of Archaea and Bacteria in a subsurface radioactive thermal spring in the Austrian Central Alps, and evidence of ammonia-oxidizing Crenarchaeota. Appl Environ Microb 73 : 259 270.
-
(2007)
Appl Environ Microb
, vol.73
, pp. 259-270
-
-
Weidler, G.W.1
Dornmayr-Pfaffenhuemer, M.2
Gerbl, F.W.3
Heinen, W.4
Stan-Lotter, H.5
-
43
-
-
63149135412
-
Trends and challenges in soil research 2009: Linking global climate change to local long-term forest productivity
-
Xu ZH, Chen CR, He JZ Liu JX (2009) Trends and challenges in soil research 2009: linking global climate change to local long-term forest productivity. J Soil Sediment 9 : 83 88.
-
(2009)
J Soil Sediment
, vol.9
, pp. 83-88
-
-
Xu, Z.H.1
Chen, C.R.2
He, J.Z.3
Liu, J.X.4
|