Systematic analysis of the falcate-spored graminicolous Colletotrichum and a description of six new species from warm-season grasses

Mycologia

Volumn 101, Issue 5, 2009, Pages 717-732

  Crouch, Jo Anne ^a   Clarke, Bruce B ^a   White Jr , James F ^a   Hillman, Bradley I ^a  

^a RUTGERS UNIVERSITY   (United States)

Author keywords

Appressoria; Colletotrichum; Phylogenetic analysis; Warm season grasses

Indexed keywords

CONVERGENT EVOLUTION; FUNGUS; GRASS; HOST PLANT; HOST RANGE; MOLECULAR ANALYSIS; MORPHOLOGY; NEW SPECIES; PHYLOGENETICS; SPORE; TAXONOMY;

COLLETOTRICHUM; POACEAE;

FUNGAL DNA; FUNGAL PROTEIN;

ARTICLE; CLASSIFICATION; COLLETOTRICHUM; DNA SEQUENCE; FUNGUS SPORE; GENETICS; MICROBIOLOGICAL EXAMINATION; MICROBIOLOGY; PHYLOGENY; PHYSIOLOGY; POACEAE; SEASON; SPECIES DIFFERENCE; ULTRASTRUCTURE;

COLLETOTRICHUM; DNA, FUNGAL; FUNGAL PROTEINS; MYCOLOGICAL TYPING TECHNIQUES; PHYLOGENY; POACEAE; SEASONS; SEQUENCE ANALYSIS, DNA; SPECIES SPECIFICITY; SPORES, FUNGAL;

EID: 70349562004     PISSN: 00275514     EISSN: 15572536     Source Type: Journal    
DOI: 10.3852/08-230     Document Type: Article

References (29)

1. Cannon PF, Bridge PD, Monte E. 2000. Linking the past, present and future of Colletotrichum systematics. In: Prusky D, Freeman S, Dickman MD, eds. Colletotri- chum: host specificity, pathology and host-pathogen interaction. St Paul, Minnesota: APS Press. p 1-20.
2. Crouch JA, Clarke BB, Hillman BI. 2006. Unraveling evolutionary relationships among the divergent lineages of Colletotrichum causing anthracnose disease in turfgrass and corn. Phytopathol 96:46-60.
3. Crouch JA, Clarke BB, Hillman BI. 2009a. What is the value of ITS sequence data in Colletotrichum systematics and species diagnosis? A case study using the falcate-spored graminicolous Colletotrichum group. Mycologia 101: 648-656.
4. Crouch JA, Glasheen BM, Giunta MA, Clarke BB, Hillman BI. 2008a. The evolution of transposon repeat-induced point mutation in the genome of Colletotrichum cereale: reconciling sex, recombination and homoplasy in an "asexual" pathogen. Fungal Genet Biol 45:190-206.
5. Crouch JA, Glasheen BM, Uddin W, Clarke BB, Hillman BI. 2008b. Patterns of diversity in populations of the turfgrass pathogen Colletotrichum cereale as revealed by transposon fingerprint profiles. Crop Sci 48:1203-1210.
6. Crouch JA, Inguagiato JC. 2009. First report of anthracnose disease of ornamental feather reed grass (Calamagrostis 3 acutifolia 'Karl Foerster') caused by Colletotrichum cereale. Plant Dis 93:203.
7. Crouch JA, Tredway LP, Clarke BB, Hillman BI. 2009b. Phylogenetic and population genetic divergence correspond with habitat for the pathogen Colletotrichum cereale and allied taxa across diverse grass communities. Mol Ecol 18:123-135.
8. Du M, Schardl CL, Nuckles EM, Vaillancourt LJ. 2005. Using mating-type gene sequences for improved phylogenetic resolution of Colletotrichum species com- plexes. Mycologia 97:641-658.
9. Eriksson OE, Winka K. 1998. Families and higher taxa of Ascomycota. Myconet 1:17-24. http://www.umu.se./myconet/fam.rtf.html
10. Fang GC, Hanau RM, Vaillancourt LJ. 2002. The SOD2 gene, encoding a manganese-type superoxide dismutase, is up-regulated during conidiogenesis in the plantpathogenic fungus Colletotrichum graminicola. Fungal Genet Biol 36:155-165.
11. Farr DF, Aime MC, Rossman AY, Palm ME. 2006. Species of Colletotrichum in agavaceae. Mycol Res 110:1395-1408.
12. Freeman S, Katan T, Shabi E. 1998. Characterization of Colletotrichum species responsible for anthracnose diseases of various fruits. Plant Dis 82:596-605.
13. Huelsenbeck JP, Ronquist F. 2001. MrBayes: Bayesian inference of phylogenetic trees. Bioinformatics 17: 754-755.
14. Pavgi MS, Singh UP. 1965. Parasitic fungi from north India IV. Mycopath Mycol Applicata 27:81-88.
15. Polashock JJ, Caruso F, Oudemans PV, McManus P, Crouch JA. 2009. An overview of the North American cranberry fruit rot fungal community using morphological and phylogenetic affinities. Plant Pathol doi:10.1111/ j.1365-3059.2009.02120.x.
16. Posada D, Crandall KA. 1998. Modeltest: testing the model of DNA substitution. Bioinformatics 14:817-818.
17. Rydholm C, Dyer PS, Lutzoni F. 2007. DNA sequence characterization and molecular evolution of Mat1 and Mat2 mating-type loci of the self-compatible ascomycete mold Neosartorya fischeri. Eukaryot Cell 6:868-874.
18. Sutton BC. 1965. Studies on the taxonomy of Colletotrichum Cda with especial reference to C. graminicola (Ces.) Wilson [Doctoral dissertation]. London: Univ. London.
19. Sutton BC. 1966. Development of fructifications in Colletotrichum graminicola (Ces.) Wils. and related species. Can J Bot 44:887-897.
20. Sutton BC. 1968. The appressoria of Colletotrichum graminicola and C. falcatum. Can J Bot 46:873-876.
21. Sutton BC. 1980. The coelomycetes: fungi imperfecti with pycnidia, acervuli and stromata. Kew UK: Commonwealth Mycological Institute. 696 p.
22. Sutton BC. 1992. The genus Glomerella and its anamorph Colletotrichum. In: Bailey JA, Jeger MJ, eds. Colletotri- chum: biology, pathology and control. Wallingford, UK: CAB International. p 1-26.
23. Swofford DL. 2000. PAUP*: phylogenetic analysis using parsimony (*and other methods). Sunderland, Massa- chusetts: Sinauer Associates.
24. Taylor JW, Jacobson DJ, Kroken S, Kasuga T, Geiser DM, Hibbett DS, Fisher MC. 2000. Phylogenetic species recognition and species concepts in fungi. Fungal Genet Biol 31:21-32.
25. Thompson JD, Higgins DG, Gibson TJ. 1994. Clustal W: improving the sensitivity of progressive multiple se- quence alignment through sequence weighting, posi- tion-specific gap penalties and matrix choice. Nucleic Acids Res 22:4673-4680.
26. U'ren JM, Dalling JW, Gallery RE, Maddison DR, Davis EC, Gibson CM, Arnold AE. 2009. Diversity and evolution- ary origins of fungi associated with seeds of a Neotropical pioneer tree: a case study for analysing fungal environmental samples. Mycol Res 113:432-449.
27. Vaillancourt L, Du M, Wang J, Rollins J, Hanau R. 2000. Genetic analysis of cross fertility between two self-sterile strains of Glomerella graminicola. Mycologia 92:430- 435.
28. von Arx JA. 1957. Die arten der gattung Colletotrichum Cda. Phytopathol Z 29:413-468.
29. Wilson GW. 1914. The identity of the anthracnose of grasses in the United States. Phytopathology 4:106-112.