메뉴 건너뛰기




Volumn 8, Issue 4, 2009, Pages 276-282

Chromatin insulators: Lessons from the fly

Author keywords

Drosophila; Insulator; Nucleus; Transcription

Indexed keywords

CCCTC BINDING FACTOR; DNA BINDING PROTEIN; DROSOPHILA PROTEIN; NUCLEAR FACTOR; PROTEIN CP190; SUPPRESSOR OF HAIRY WING PROTEIN; UNCLASSIFIED DRUG; ZESTE WHITE 5 PROTEIN; ZINC FINGER PROTEIN;

EID: 70349548593     PISSN: 14739550     EISSN: 14774062     Source Type: Journal    
DOI: 10.1093/bfgp/elp032     Document Type: Article
Times cited : (48)

References (35)
  • 1
    • 53149107845 scopus 로고    scopus 로고
    • Chromatin insulators: Regulatory mechanisms and epigenetic inheritance
    • Bushey AM, Dorman ER, Corces VG. Chromatin insulators: Regulatory mechanisms and epigenetic inheritance. Mol Cell 2008;32:1-9.
    • (2008) Mol Cell , vol.32 , pp. 1-9
    • Bushey, A.M.1    Dorman, E.R.2    Corces, V.G.3
  • 2
    • 35548990188 scopus 로고    scopus 로고
    • We gather together: Insulators and genome organization
    • Wallace JA, Felsenfeld G. We gather together: Insulators and genome organization. Curr Opin Genet Dev 2007;17: 400-7.
    • (2007) Curr Opin Genet Dev , vol.17 , pp. 400-407
    • Wallace, J.A.1    Felsenfeld, G.2
  • 3
    • 67549119096 scopus 로고    scopus 로고
    • CTCF: Master weaver of the genome
    • Phillips JE, Corces VG. CTCF: Master weaver of the genome. Cell 2009;137:1194-211.
    • (2009) Cell , vol.137 , pp. 1194-1211
    • Phillips, J.E.1    Corces, V.G.2
  • 4
    • 0026711089 scopus 로고
    • A group of scs elements function as domain boundaries in an enhancer-blocking assay
    • Kellum R, Schedl P. A group of scs elements function as domain boundaries in an enhancer-blocking assay. Mol Cell Biol 1992;12 2424-31.
    • (1992) Mol Cell Biol , vol.12 , pp. 2424-2431
    • Kellum, R.1    Schedl, P.2
  • 5
    • 0029063587 scopus 로고
    • Visualization of chromosomal domains with boundary element-associated factor BEAF-32
    • Zhao K, Hart CM, Laemmli UK. Visualization of chromosomal domains with boundary element-associated factor BEAF-32. Cell 1995;81 879-89.
    • (1995) Cell , vol.81 , pp. 879-889
    • Zhao, K.1    Hart, C.M.2    Laemmli, U.K.3
  • 6
    • 0024114026 scopus 로고
    • The Drosophila melanogaster suppressor of Hairy-wing protein binds to specific sequences of the gypsy retrotransposon
    • Spana C, Harrison DA, Corces VG. The Drosophila melanogaster suppressor of Hairy-wing protein binds to specific sequences of the gypsy retrotransposon. Genes Dev 1988;2: 1414-23.
    • (1988) Genes Dev , vol.2 , pp. 1414-1423
    • Spana, C.1    Harrison, D.A.2    Corces, V.G.3
  • 7
    • 0037938506 scopus 로고    scopus 로고
    • A novel boundary element may facilitate independent gene regulation in the Antennapedia complex of Drosophila
    • Belozerov VE, Majumder P, Shen P, Cai HN. A novel boundary element may facilitate independent gene regulation in the Antennapedia complex of Drosophila. Embo J 2003;22:3113-21.
    • (2003) Embo J , vol.22 , pp. 3113-3121
    • Belozerov, V.E.1    Majumder, P.2    Shen, P.3    Cai, H.N.4
  • 8
    • 0033567325 scopus 로고    scopus 로고
    • The Zw5 protein, a component of the scs chromatin domain boundary, is able to block enhancer-promoter interaction
    • Gaszner M, Vazquez J, Schedl P. The Zw5 protein, a component of the scs chromatin domain boundary, is able to block enhancer-promoter interaction. Genes Dev 1999;13: 2098-107.
    • (1999) Genes Dev , vol.13 , pp. 2098-2107
    • Gaszner, M.1    Vazquez, J.2    Schedl, P.3
  • 9
    • 33847354693 scopus 로고    scopus 로고
    • A genetic screen supports a broad role for the Drosophila insulator proteins BEAF-32A and BEAF-32B in maintaining patterns of gene expression
    • Roy S, Tan YY, Hart CM. A genetic screen supports a broad role for the Drosophila insulator proteins BEAF-32A and BEAF-32B in maintaining patterns of gene expression. Mol Genet Genom 2007;277: 273-86.
    • (2007) Mol Genet Genom , vol.277 , pp. 273-286
    • Roy, S.1    Tan, Y.Y.2    Hart, C.M.3
  • 10
    • 33746412461 scopus 로고    scopus 로고
    • The Drosophila boundary element-associated factors BEAF-32A and BEAF-32B affect chromatin structure
    • Gilbert MK, Tan YY, Hart CM. The Drosophila boundary element-associated factors BEAF-32A and BEAF-32B affect chromatin structure. Genetics 2006;173: 1365-75.
    • (2006) Genetics , vol.173 , pp. 1365-1375
    • Gilbert, M.K.1    Tan, Y.Y.2    Hart, C.M.3
  • 11
    • 34250698042 scopus 로고    scopus 로고
    • Characterization of BEAF mutations isolated by homologous recombination in Drosophila
    • Roy S, Gilbert MK, Hart CM. Characterization of BEAF mutations isolated by homologous recombination in Drosophila. Genetics 2007;176 801-13.
    • (2007) Genetics , vol.176 , pp. 801-813
    • Roy, S.1    Gilbert, M.K.2    Hart, C.M.3
  • 12
    • 0027445934 scopus 로고
    • A leucine zipper domain of the suppressor of Hairy-wing protein mediates its repressive effect on enhancer function
    • Harrison DA, Gdula DA, Coyne RS, Corces VG. A leucine zipper domain of the suppressor of Hairy-wing protein mediates its repressive effect on enhancer function. Genes Dev 1993;7:1966-78.
    • (1993) Genes Dev , vol.7 , pp. 1966-1978
    • Harrison, D.A.1    Gdula, D.A.2    Coyne, R.S.3    Corces, V.G.4
  • 13
    • 0035873243 scopus 로고    scopus 로고
    • Interactions between the Su(Hw) and Mod(mdg4) proteins required for gypsy insulator function
    • Ghosh D, Gerasimova TI, Corces VG. Interactions between the Su(Hw) and Mod(mdg4) proteins required for gypsy insulator function. Embo J 2001;20:2518-27.
    • (2001) Embo J , vol.20 , pp. 2518-2527
    • Ghosh, D.1    Gerasimova, T.I.2    Corces, V.G.3
  • 14
    • 0034954819 scopus 로고    scopus 로고
    • Insulation of enhancer-promoter communication by a gypsy transposon insert in the Drosophila cut gene: Cooperation between suppressor of hairy-wing and modifier of mdg4 proteins
    • Gause M, Morcillo P, Dorsett D. Insulation of enhancer-promoter communication by a gypsy transposon insert in the Drosophila cut gene: cooperation between suppressor of hairy-wing and modifier of mdg4 proteins. Mol Cell Biol 2001;21:4807-17.
    • (2001) Mol Cell Biol , vol.21 , pp. 4807-4817
    • Gause, M.1    Morcillo, P.2    Dorsett, D.3
  • 15
    • 0038598269 scopus 로고    scopus 로고
    • Genetic and molecular complexity of the position effect variegation modifier mod(mdg4) in Drosophila
    • Buchner K, Roth P, Schotta G, et al. Genetic and molecular complexity of the position effect variegation modifier mod(mdg4) in Drosophila. Genetics 2000;155: 141-57.
    • (2000) Genetics , vol.155 , pp. 141-157
    • Buchner, K.1    Roth, P.2    Schotta, G.3
  • 16
    • 0034922592 scopus 로고    scopus 로고
    • Protein determinants of insertional specificity for the Drosophila gypsy retrovirus
    • Labrador M, Corces VG. Protein determinants of insertional specificity for the Drosophila gypsy retrovirus. Genetics 2001;158 1101-10.
    • (2001) Genetics , vol.158 , pp. 1101-1110
    • Labrador, M.1    Corces, V.G.2
  • 17
    • 0028978180 scopus 로고
    • A Drosophila protein that imparts directionality on a chromatin insulator is an enhancer of position-effect variegation
    • Gerasimova TI, Gdula DA, Gerasimov DV, et al. A Drosophila protein that imparts directionality on a chromatin insulator is an enhancer of position-effect variegation. Cell 1995;82:587-97.
    • (1995) Cell , vol.82 , pp. 587-597
    • Gerasimova, T.I.1    Gdula, D.A.2    Gerasimov, D.V.3
  • 18
    • 9744257012 scopus 로고    scopus 로고
    • The centrosomal protein CP190 is a component of the gypsy chromatin insulator
    • Pai CY, Lei EP, Ghosh D, Corces VG. The centrosomal protein CP190 is a component of the gypsy chromatin insulator. Mol Cell 2004;16 737-48.
    • (2004) Mol Cell , vol.16 , pp. 737-748
    • Pai, C.Y.1    Lei, E.P.2    Ghosh, D.3    Corces, V.G.4
  • 19
    • 34948900929 scopus 로고    scopus 로고
    • The Drosophila insulator proteins CTCF and CP190 link enhancer blocking to body patterning
    • Mohan M, Bartkuhn M, Herold M, et al. The Drosophila insulator proteins CTCF and CP190 link enhancer blocking to body patterning. Embo J 2007;26: 4203-14.
    • (2007) Embo J , vol.26 , pp. 4203-4214
    • Mohan, M.1    Bartkuhn, M.2    Herold, M.3
  • 20
    • 36749079905 scopus 로고    scopus 로고
    • Coordinated control of dCTCF and gypsy chromatin insulators in Drosophila
    • Gerasimova TI, Lei EP, Bushey AM, Corces VG. Coordinated control of dCTCF and gypsy chromatin insulators in Drosophila. Mol Cell 2007;28:761-72.
    • (2007) Mol Cell , vol.28 , pp. 761-772
    • Gerasimova, T.I.1    Lei, E.P.2    Bushey, A.M.3    Corces, V.G.4
  • 21
    • 34547627357 scopus 로고    scopus 로고
    • CTCF genomic binding sites in Drosophila and the organisation of the bithorax complex
    • Holohan EE, Kwong C, Adryan B, et al. CTCF genomic binding sites in Drosophila and the organisation of the bithorax complex. PLoS Genet 2007;3:e112.
    • (2007) PLoS Genet , vol.3
    • Holohan, E.E.1    Kwong, C.2    Adryan, B.3
  • 22
    • 7244256816 scopus 로고    scopus 로고
    • The enhancer-blocking activity of the Fab-7 boundary from the Drosophila bithorax complex requires GAGA-factor-binding sites
    • Schweinsberg S, Hagstrom K, Gohl D, et al. The enhancer-blocking activity of the Fab-7 boundary from the Drosophila bithorax complex requires GAGA-factor-binding sites. Genetics 2004;168 1371-84.
    • (2004) Genetics , vol.168 , pp. 1371-1384
    • Schweinsberg, S.1    Hagstrom, K.2    Gohl, D.3
  • 23
    • 65449116170 scopus 로고    scopus 로고
    • Active promoters and insulators are marked by the centrosomal protein 190
    • Bartkuhn M, Straub T, Herold M, et al. Active promoters and insulators are marked by the centrosomal protein 190. Embo J 2009;28:877-88.
    • (2009) Embo J , vol.28 , pp. 877-888
    • Bartkuhn, M.1    Straub, T.2    Herold, M.3
  • 24
    • 66149164708 scopus 로고    scopus 로고
    • Three subclasses of a Drosophila insulator show distinct and cell type-specific genomic distributions
    • Bushey AM, Ramos E, Corces VG. Three subclasses of a Drosophila insulator show distinct and cell type-specific genomic distributions. Genes Dev 2009;23:1338-50.
    • (2009) Genes Dev , vol.23 , pp. 1338-1350
    • Bushey, A.M.1    Ramos, E.2    Corces, V.G.3
  • 25
    • 6944249032 scopus 로고    scopus 로고
    • Interaction between the GAGA factor and Mod(mdg4) proteins promotes insulator bypass in Drosophila
    • Melnikova L, Juge F, Gruzdeva N, et al. Interaction between the GAGA factor and Mod(mdg4) proteins promotes insulator bypass in Drosophila. Proc Natl Acad Sci USA 2004;101:14806-11.
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 14806-14811
    • Melnikova, L.1    Juge, F.2    Gruzdeva, N.3
  • 26
    • 0033638334 scopus 로고    scopus 로고
    • A chromatin insulator determines the nuclear localization of DNA
    • Gerasimova TI, Byrd K, Corces VG. A chromatin insulator determines the nuclear localization of DNA. Mol Cell 2000; 6:1025-35.
    • (2000) Mol Cell , vol.6 , pp. 1025-1035
    • Gerasimova, T.I.1    Byrd, K.2    Corces, V.G.3
  • 27
    • 0042978644 scopus 로고    scopus 로고
    • Visualization of chromatin domains created by the gypsy insulator of Drosophila
    • Byrd K, Corces VG. Visualization of chromatin domains created by the gypsy insulator of Drosophila. J Cell Biol 2003;162:565-74.
    • (2003) J Cell Biol , vol.162 , pp. 565-574
    • Byrd, K.1    Corces, V.G.2
  • 28
    • 25844444153 scopus 로고    scopus 로고
    • The ubiquitin ligase dTopors directs the nuclear organization of a chromatin insulator
    • Capelson M, Corces VG. The ubiquitin ligase dTopors directs the nuclear organization of a chromatin insulator. Mol Cell 2005;20 105-16.
    • (2005) Mol Cell , vol.20 , pp. 105-116
    • Capelson, M.1    Corces, V.G.2
  • 29
    • 33646584197 scopus 로고    scopus 로고
    • SUMO conjugation attenuates the activity of the gypsy chromatin insulator
    • Capelson M, Corces VG. SUMO conjugation attenuates the activity of the gypsy chromatin insulator. Embo J 2006; 25:1906-14.
    • (2006) Embo J , vol.25 , pp. 1906-1914
    • Capelson, M.1    Corces, V.G.2
  • 30
    • 0037338603 scopus 로고    scopus 로고
    • Protein:pRotein interactions and the pairing of boundary elements in vivo
    • Blanton J, Gaszner M, Schedl P. Protein:pRotein interactions and the pairing of boundary elements in vivo. Genes Dev 2003;17 664-75.
    • (2003) Genes Dev , vol.17 , pp. 664-675
    • Blanton, J.1    Gaszner, M.2    Schedl, P.3
  • 31
    • 33746472891 scopus 로고    scopus 로고
    • RNA interference machinery influences the nuclear organization of a chromatin insulator
    • Lei EP, Corces VG. RNA interference machinery influences the nuclear organization of a chromatin insulator. Nat Genet 2006;38 936-41.
    • (2006) Nat Genet , vol.38 , pp. 936-941
    • Lei, E.P.1    Corces, V.G.2
  • 32
    • 34347335677 scopus 로고    scopus 로고
    • Boundary element-associated factor 32B connects chromatin domains to the nuclear matrix
    • Pathak RU, Rangaraj N, Kallappagoudar S, et al. Boundary element-associated factor 32B connects chromatin domains to the nuclear matrix. Mol Cell Biol 2007;27:4796-806.
    • (2007) Mol Cell Biol , vol.27 , pp. 4796-4806
    • Pathak, R.U.1    Rangaraj, N.2    Kallappagoudar, S.3
  • 33
    • 0032708736 scopus 로고    scopus 로고
    • Evidence for an antagonistic relationship between the boundary element-associated factor BEAF and the transcription factor DREF
    • Hart CM, Cuvier O, Laemmli UK. Evidence for an antagonistic relationship between the boundary element-associated factor BEAF and the transcription factor DREF. Chromosoma 1999;108:375-83.
    • (1999) Chromosoma , vol.108 , pp. 375-383
    • Hart, C.M.1    Cuvier, O.2    Laemmli, U.K.3
  • 34
    • 67650093438 scopus 로고    scopus 로고
    • Genome-wide mapping of BEAF binding sites in Drosophila links BEAF to transcription
    • Jiang N, Emberly E, Cuvier O, Hart CM. Genome-wide mapping of BEAF binding sites in Drosophila links BEAF to transcription. Mol Cell Biol 2009;29:3556-68.
    • (2009) Mol Cell Biol , vol.29 , pp. 3556-3568
    • Jiang, N.1    Emberly, E.2    Cuvier, O.3    Hart, C.M.4
  • 35
    • 84891722352 scopus 로고    scopus 로고
    • BEAF regulates cell-cycle genes through the controlled deposition of H3K9 methylation marks into its conserved dual-core binding sites
    • Emberly E, Blattes R, Schuettengruber B, et al. BEAF regulates cell-cycle genes through the controlled deposition of H3K9 methylation marks into its conserved dual-core binding sites. PLoS Biol 2008;6:2896-910.
    • (2008) PLoS Biol , vol.6 , pp. 2896-2910
    • Emberly, E.1    Blattes, R.2    Schuettengruber, B.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.