The FG loop of a heme-based gas sensor enzyme, Ec DOS, functions in heme binding, autoxidation and catalysis

Journal of Inorganic Biochemistry

Volumn 103, Issue 10, 2009, Pages 1380-1385

  Ito, Shinya ^a   Igarashi, Jotaro ^a   Shimizu, Toru ^a  

^a TOHOKU UNIVERSITY   (Japan)

Author keywords

Cyclic di GMP; Gas sensor; Heme sensor; Intra molecular signal transduction; Phosphodiesterase

Indexed keywords

ARGININE; ASPARTIC ACID; ESCHERICHIA COLI DIRECT OXYGEN SENSOR; HEME; IRON OXIDE; MUTANT PROTEIN; PHOSPHODIESTERASE; PROPIONIC ACID; PROTOPORPHYRIN; UNCLASSIFIED DRUG;

AMINO ACID SEQUENCE; ARTICLE; AUTOOXIDATION; BINDING AFFINITY; CATALYSIS; COMPLEX FORMATION; CONTROLLED STUDY; CRYSTAL STRUCTURE; ENZYME ANALYSIS; ENZYME STRUCTURE; ESCHERICHIA COLI; INHIBITION KINETICS; MOLECULAR STABILITY; NONHUMAN; PROTEIN BINDING; PROTEIN DOMAIN; PROTEIN FUNCTION; SIGNAL TRANSDUCTION; WILD TYPE;

AMINO ACID SUBSTITUTION; CARBON MONOXIDE; ESCHERICHIA COLI; ESCHERICHIA COLI PROTEINS; HEME; MUTATION, MISSENSE; OXIDATION-REDUCTION; OXYGEN; PHOSPHORIC DIESTER HYDROLASES; PROTEIN STRUCTURE, SECONDARY; PROTEIN STRUCTURE, TERTIARY;

EID: 70349429628     PISSN: 01620134     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jinorgbio.2009.07.012     Document Type: Article

References (27)

1. Simm R., Morr M., Kader A., Nimtz M., and Römling U. Mol. Microbiol. 53 (2004) 1123-1134
2. Galperin M. Environ. Microbiol. 6 (2004) 552-567
3. Henge R. Nat. Rev. Microbiol. 7 (2009) 263-273
4. Schmidt A.J., Ryjenkov D.A., and Gomelsky M. J. Bacteriol. 187 (2005) 4774-4781
5. Römling U., Gomelsky M., and Galperin M.Y. Mol. Microbiol. 57 (2005) 629-639
6. Méndez-Ortiz M.M., Hyodo M., Hayakawa Y., and Membrillo-Hernández J. J. Biol. Chem. 281 (2006) 8090-8099
7. Christen B., Christen M., Paul R., Schmid F., Folcher M., Jenoe P., Meuwly M., and Jenal U. J. Biol. Chem. 281 (2006) 32015-32024
8. Tamayo R., Pratt J.T., and Camilli A. Annu. Rev. Microbiol. 61 (2007) 131-148
9. Pesavento C., Becker G., Sommerfeldt N., Possling A., Tschowri N., Mehlis A., and Hengge R. Genes Develop. 22 (2008) 2434-2446
10. Takahashi H., and Shimizu T. Chem. Lett. 35 (2006) 970-971
11. Tanaka A., Takahashi H., and Shimizu T. J. Biol. Chem. 282 (2007) 21301-21307
12. Tanaka A., and Shimizu T. Biochemistry 47 (2008) 13438-13446
13. Park H., Suquet C., Satterlee J.D., and Kang C. Biochemistry 43 (2004) 2738-2746
14. Kurokawa H., Lee D.S., Watanabe M., Sagami I., Mikami B., Raman C.S., and Shimizu T. J. Biol. Chem. 279 (2004) 20186-20193
15. Ishitsuka Y., Araki Y., Tanaka A., Igarashi J., Ito O., and Shimizu T. Biochemistry 34 (2008) 8874-8884
16. Gilles-Gonzalez M.A., and Gonzalez G. J. Inorg. Biochem. 99 (2005) 1-22
17. Tanaka A., Nakamura H., Shiro Y., and Fujii H. Biochemistry 45 (2006) 2515-2523
18. Mukai M., Nakamura K., Nakamura H., Iizuka T., and Shiro Y. Biochemistry 39 (2000) 13810-13816
19. Watanabe M., Kurokawa H., Yoshimura-Suzuki T., Sagami I., and Shimizu T. Eur. J. Biochem. 271 (2004) 3937-3942
20. Sasakura Y., Hirata S., Sugiyama S., Suzuki S., Taguchi S., Watanabe M., Matsui T., Sagami I., and Shimizu T. J. Biol. Chem. 277 (2002) 23821-23827
21. Taguchi S., Matsui T., Igarashi J., Sasakura Y., Araki Y., Ito O., Sugiyama S., Sagami I., and Shimizu T. J. Biol. Chem. 279 (2004) 3340-3347
22. Springer B.A., Sligar S.G., Olson J.S., and Phillips Jr. G.N. Chem. Rev. 94 (1994) 699-714
23. Ito S., Araki Y., Tanaka A., Igarashi J., Wada T., and Shimizu T. J. Inorg. Biochem. 103 (2009) 989-996
24. Hargrove M.S., Wilkinson A.J., and Olson J.S. Biochemistry 35 (1996) 11300-11309
25. Hargrove M.S., and Olson J.S. Biochemistry 35 (1996) 11310-11318
26. Igarashi J., Murase M., Iizuka A., Pichierri F., Martinkova M., and Shimizu T. J. Biol. Chem. 283 (2008) 18782-18791
27. Igarashi J., Kitanishi K., Martinkova M., Murase M., Iizuka A., and Shimizu T. Acta Chim. Slov. 55 (2008) 67-74