Characterization of a metal-independent CAZy family 6 glycosyltransferase from bacteroides ovatus

Journal of Biological Chemistry

Volumn 284, Issue 37, 2009, Pages 25126-25134

  Tumbale, Percy ^a   Brew, Keith ^a  

^a FLORIDA ATLANTIC UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ANTIGENIC VARIATION; BACTERIAL PROTEIN; BACTEROIDES; CATALYTIC DOMAINS; COFACTORS; COMPLEX CARBOHYDRATES; CYANOPHAGES; FUNCTIONAL CHARACTERIZATION; GLYCOSYL TRANSFERASE; GLYCOSYLTRANSFERASES; HORIZONTAL GENE TRANSFER; HUMAN BLOODS; INFLAMMATORY BOWEL DISEASE; MEMBRANE PROTEINS; MULTI DOMAINS; O-ANTIGEN; SEQUENTIAL MECHANISM; STRUCTURE-FUNCTION RELATIONSHIP;

ANIMALS; BACTERIOLOGY; ENZYMES; GENE TRANSFER; INTERNET PROTOCOLS; METAL IONS; SUGARS;

METALS;

FUCOSYLTRANSFERASE; GLUCURONOSYLTRANSFERASE; GLYCOSYLTRANSFERASE; GLYCOSYLTRANSFERASE CAZY FAMILY 6; O ANTIGEN; OLIGOSACCHARIDE; UNCLASSIFIED DRUG;

AMINO ACID SEQUENCE; ARTICLE; BACTEROIDES OVATUS; CATALYSIS; CONTROLLED STUDY; CYANOPHAGE; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN EXPRESSION; PROTEIN FUNCTION; PROTEIN MOTIF; PROTEIN STRUCTURE; SEQUENCE ALIGNMENT;

AMINO ACID SEQUENCE; ANTIGENS, BACTERIAL; BACTEROIDES; BASE SEQUENCE; CARBOHYDRATES; CATALYSIS; CATALYTIC DOMAIN; CLONING, MOLECULAR; DNA MUTATIONAL ANALYSIS; ESCHERICHIA COLI; GLYCOSYLTRANSFERASES; KINETICS; METALS; MOLECULAR SEQUENCE DATA; PROTEIN STRUCTURE, TERTIARY;

BACTERIA (MICROORGANISMS); BACTEROIDES OVATUS; EUKARYOTA; PROKARYOTA; VERTEBRATA;

EID: 69949147916     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M109.033878     Document Type: Article

References (41)

1. Unligil, U. M., and Rini, J. M. (2000) Curr. Opin. Struct. Biol. 10, 510-517
2. Breton, C., Snajdrová, L., Jeanneau, C., Koca, J., and Imberty, A. (2006) Glycobiology 16, 29R-37R
3. Lairson, L. L., Henrissat, B., Davies, G. J., and Withers, S. G. (2008) Annu. Rev. Biochem. 77, 521-555
4. Campbell, J. A., Davies, G. J., Bulone, V., and Henrissat, B. (1997) Biochem. J. 326, 929-939
5. Coutinho, P. M., Deleury, E., Davies, G. J., and Henrissat, B. (2003) J. Mol. Biol. 328, 307-317
6. Turcot-Dubois, A. L., Le Moullac-Vaidye, B., Despiau, S., Roubinet, F., Bovin, N., Le Pendu, J., and Blancher, A. (2007) Glycobiology 17, 516-528
7. Gastinel, L. N., Bignon, C., Misra, A. K., Hindsgaul, O., Shaper, J. H., and Joziasse, D. H. (2001) EMBO J. 20, 638-649
8. Boix, E., Swaminathan, G. J., Zhang, Y., Natesh, R., Brew, K., and Acharya, K. R. (2001) J. Biol. Chem. 276, 48608-48614
9. Patenaude, S. I., Seto, N. O., Borisova, S. N., Szpacenko, A., Marcus, S. L., Palcic, M. M., and Evans, S. V. (2002) Nat. Struct. Biol. 9, 685-690
10. Zhang, Y., Wang, P. G., and Brew, K. (2001) J. Biol. Chem. 276, 11567-11574
11. Galili, U., Shohet, S. B., Kobrin, E., Stults, C. L., and Macher, B. A. (1988) J. Biol. Chem. 263, 17755-17762
12. Xu, H., Storch, T., Yu, M., Elliott, S. P., and Haslam, D. B. (1999) J. Biol. Chem. 274, 29390-29398
13. Yamamoto, F., Clausen, H., White, T., Marken, J., and Hakomori, S. (1990) Nature 345, 229-233
14. Keusch, J. J., Manzella, S. M., Nyame, K. A., Cummings, R. D., and Baenziger, J. U. (2000) J. Biol. Chem. 275, 25308-25314
15. Sullivan, M. B., Coleman, M. L., Weigele, P., Rohwer, F., and Chisholm, S. W. (2005) PLoS Biol. 3, e144
16. Yi, W., Shao, J., Zhu, L., Li, M., Singh, M., Lu, Y., Lin, S., Li, H., Ryu, K., Shen, J., Guo, H., Yao, Q., Bush, C. A., and Wang, P. G. (2005) J. Am. Chem. Soc. 127, 2040-2041
17. Yi, W., Shen, J., Zhou, G., Li, J., and Wang, P. G. (2008) J. Am. Chem. Soc. 130, 14420-14421
18. Venter, J. C., Remington, K., Heidelberg, J. F., Halpern, A. L., Rusch, D., Eisen, J. A., Wu, D., Paulsen, I., Nelson, K. E., Nelson, W., Fouts, D. E., Levy, S., Knap, A. H., Lomas, M. W., Nealson, K., White, O., Peterson, J., Hoffman, J., Parsons, R., Baden-Tillson, H., Pfannkoch, C., Rogers, Y. H., and Smith, H. O. (2004) Science 304, 66-74
19. Yooseph, S., Sutton, G., Rusch, D. B., Halpern, A. L., Williamson, S. J., Remington, K., Eisen, J. A., Heidelberg, K. B., Manning, G., Li, W., Jaroszewski, L., Cieplak, P., Miller, C. S., Li, H., Mashiyama, S. T., Joachimiak, M. P., van Belle, C., Chandonia, J. M., Soergel, D. A., Zhai, Y., Natarajan, K., Lee, S., Raphael, B. J., Bafna, V., Friedman, R., Brenner, S. E., Godzik, A., Eisenberg, D., Dixon, J. E., Taylor, S. S., Strausberg, R. L., Frazier, M., and Venter, J. C. (2007) PLoS Biol. 5, e16
20. Gill, S. R., Pop, M., Deboy, R. T., Eckburg, P. B., Turnbaugh, P. J., Samuel, B. S., Gordon, J. I., Relman, D. A., Fraser-Liggett, C. M., and Nelson, K. E. (2006) Science 312, 1355-1359
21. Kurokawa, K., Itoh, T., Kuwahara, T., Oshima, K., Toh, H., Toyoda, A., Takami, H., Morita, H., Sharma, V. K., Srivastava, T. P., Taylor, T. D., Noguchi, H., Mori, H., Ogura, Y., Ehrlich, D. S., Itoh, K., Takagi, T., Sakaki, Y., Hayashi, T., and Hattori, M. (2007) DNA Res. 14, 169-181
22. Henion, T. R., Macher, B. A., Anaraki, F., and Galili, U. (1994) Glycobiology 4, 193-201
23. Persson, M., Letts, J. A., Hosseini-Maaf, B., Borisova, S. N., Palcic, M. M., Evans, S. V., and Olsson, M. L. (2007) J. Biol. Chem. 282, 9564-9570
24. Saitoh, S., Noda, S., Aiba, Y., Takagi, A., Sakamoto, M., Benno, Y., and Koga, Y. (2002) Clin. Diagn. Lab. Immunol. 9, 54-59
25. Zhang, Y., Deshpande, A., Xie, Z., Natesh, R., Acharya, K. R., and Brew, K. (2004) Glycobiology 14, 1295-1302
26. Zhang, Y., Swaminathan, G. J., Deshpande, A., Boix, E., Natesh, R., Xie, Z., Acharya, K. R., and Brew, K. (2003) Biochemistry 42, 13512-13521
27. Tumbale, P., Jamaluddin, H., Thiyagarajan, N., Acharya, K. R., and Brew, K. (2008) Glycobiology 18, 1036-1043
28. Heissigerova, H., Breton, C., Moravcova, J., and Imberty, A. (2003) Glycobiology 13, 377-386
29. Seto, N. O., Compston, C. A., Evans, S. V., Bundle, D. R., Narang, S. A., and Palcic, M. M. (1999) Eur. J. Biochem. 259, 770-775
30. Dereeper, A., Guignon, V., Blanc, G., Audic, S., Buffet, S., Chevenet, F., Dufayard, J. F., Guindon, S., Lefort, V., Lescot, M., Claverie, J. M., and Gascuel, O. (2008) Nucleic Acids Res. 36, W465-W469
31. Lozupone, C. A., Hamady, M., Cantarel, B. L., Coutinho, P. M., Henrissat, B., Gordon, J. I., and Knight, R. (2008) Proc. Natl. Acad. Sci. U.S.A. 105, 15076-15081
32. Hantke, K. (2001) Curr. Opin. Microbiol. 4, 172-177
33. Rosch, J. W., Gao, G., Ridout, G., Wang, Y. D., and Tuomanen, E. I. (2009) Mol. Microbiol. 72, 12-25
34. Tumbale, P., Jamaluddin, H., Thiyagarajan, N., Brew, K., and Acharya, K. R. (2008) Biochemistry 47, 8711-8718
35. Pak, J. E., Arnoux, P., Zhou, S., Sivarajah, P., Satkunarajah, M., Xing, X., and Rini, J. M. (2006) J. Biol. Chem. 281, 26693-26701
36. Jamaluddin, H., Tumbale, P., Withers, S. G., Acharya, K. R., and Brew, K. (2007) J. Mol. Biol. 369, 1270-1281
37. Hol, W. G. (1985) Adv. Biophys. 19, 133-165
38. Shulami, S., Furdui, C., Adir, N., Shoham, Y., Anderson, K. S., and Baasov, T. (2004) J. Biol. Chem. 279, 45110-45120
39. Kona, F., Xu, X., Martin, P., Kuzmic, P., and Gatti, D. L. (2007) Biochemistry 46, 4532-4544
40. Comstock, L. E., and Kasper, D. L. (2006) Cell 126, 847-850
41. Arnold, K., Bordoli, L., Kopp, J., and Schwede, T. (2006) Bioinformatics 22, 195-201