-
1
-
-
0028294425
-
The subplate, a transient neocortical structure: Its role in the development of connections between thalamus and cortex
-
Allendoerfer KL, Shatz CJ (1994) The subplate, a transient neocortical structure: Its role in the development of connections between thalamus and cortex. Annu Rev Neurosci 17:185-218.
-
(1994)
Annu Rev Neurosci
, vol.17
, pp. 185-218
-
-
Allendoerfer, K.L.1
Shatz, C.J.2
-
2
-
-
33746811064
-
A century of progress in corticoneurogenesis: From silver impregnation to genetic engineering
-
I3-17
-
Rakic P (2006) A century of progress in corticoneurogenesis: From silver impregnation to genetic engineering. Cereb Cortex 16 Suppl 1:i3-17.
-
(2006)
Cereb Cortex
, vol.16
, Issue.SUPPL. 1
-
-
Rakic, P.1
-
3
-
-
13544273916
-
Thrombospondins are astrocyte-secreted proteins that promote CNS synaptogenesis
-
Christopherson KS, et al. (2005) Thrombospondins are astrocyte-secreted proteins that promote CNS synaptogenesis. Cell 120:421-433.
-
(2005)
Cell
, vol.120
, pp. 421-433
-
-
Christopherson, K.S.1
-
5
-
-
0028895055
-
Mouse Otx2 functions in the formation and patterning of rostral head
-
Matsuo I, Kuratani S, Kimura C, Takeda N, Aizawa S (1995) Mouse Otx2 functions in the formation and patterning of rostral head. Genes Dev 9:2646-2658.
-
(1995)
Genes Dev
, vol.9
, pp. 2646-2658
-
-
Matsuo, I.1
Kuratani, S.2
Kimura, C.3
Takeda, N.4
Aizawa, S.5
-
6
-
-
4344669830
-
Gene expression analysis of the late embryonic mouse cerebral cortex using DNA microarray: Identification of several region- and layer-specific genes
-
Funatsu N, Inoue T, Nakamura S (2004) Gene expression analysis of the late embryonic mouse cerebral cortex using DNA microarray: Identification of several region- and layer-specific genes. Cereb Cortex 14:1031-1044.
-
(2004)
Cereb Cortex
, vol.14
, pp. 1031-1044
-
-
Funatsu, N.1
Inoue, T.2
Nakamura, S.3
-
7
-
-
0035852759
-
The effects of aging on gene expression in the hypothalamus and cortex of mice
-
Jiang CH, Tsien JZ, Schultz PG, Hu Y (2001) The effects of aging on gene expression in the hypothalamus and cortex of mice. Proc Natl Acad Sci USA 98:1930-1934.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 1930-1934
-
-
Jiang, C.H.1
Tsien, J.Z.2
Schultz, P.G.3
Hu, Y.4
-
8
-
-
0000847978
-
Gene-expression profile of the aging brain in mice
-
Lee CK, Weindruch R, Prolla TA (2000) Gene-expression profile of the aging brain in mice. Nat Genet 25:294-297.
-
(2000)
Nat Genet
, vol.25
, pp. 294-297
-
-
Lee, C.K.1
Weindruch, R.2
Prolla, T.A.3
-
9
-
-
0035956926
-
Delineating developmental and metabolic pathways in vivo by expression profiling using the RIKEN set of 18,816 full-length enriched mousec DNA arrays
-
Miki R, et al. (2001) Delineating developmental and metabolic pathways in vivo by expression profiling using the RIKEN set of 18,816 full-length enriched mousec DNA arrays. Proc Natl Acad Sci USA 98:2199-2204.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 2199-2204
-
-
Miki, R.1
-
10
-
-
0242351925
-
DNA microarray profiling of developing PS1-deficient mouse brain reveals complex and coregulated expression changes
-
Mirnics ZK, et al. (2003) DNA microarray profiling of developing PS1-deficient mouse brain reveals complex and coregulated expression changes. Mol Psychiatry 8:863-878.
-
(2003)
Mol Psychiatry
, vol.8
, pp. 863-878
-
-
Mirnics, Z.K.1
-
11
-
-
0035902553
-
Genome-wide gene expression profiles of the developing mouse hippocampus
-
Mody M, et al. (2001) Genome-wide gene expression profiles of the developing mouse hippocampus. Proc Natl Acad Sci USA 98:8862-8867.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 8862-8867
-
-
Mody, M.1
-
12
-
-
0035228759
-
Analysis of strain and regional variation in gene expression in mouse brain
-
RESEARCH0042
-
Pavlidis P, Noble WS (2001) Analysis of strain and regional variation in gene expression in mouse brain. Genome Biol 2:RESEARCH0042.
-
(2001)
Genome Biol
, vol.2
-
-
Pavlidis, P.1
Noble, W.S.2
-
13
-
-
33845765648
-
Microarray analysis of the developing cortex
-
Semeralul MO, et al. (2006) Microarray analysis of the developing cortex. J Neurobiol 66:1646-1658.
-
(2006)
J Neurobiol
, vol.66
, pp. 1646-1658
-
-
Semeralul, M.O.1
-
14
-
-
22544477508
-
Adult mouse brain gene expression patterns bear an embryologic imprint
-
Zapala MA, et al. (2005) Adult mouse brain gene expression patterns bear an embryologic imprint. Proc Natl Acad Sci USA 102:10357-10362.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 10357-10362
-
-
Zapala, M.A.1
-
15
-
-
38149129457
-
A transcriptome database for astrocytes, neurons, and oligodendrocytes: A new resource for understanding brain development and function
-
Cahoy JD, et al. (2008) A transcriptome database for astrocytes, neurons, and oligodendrocytes: A new resource for understanding brain development and function. J Neurosci 28:264-278.
-
(2008)
J Neurosci
, vol.28
, pp. 264-278
-
-
Cahoy, J.D.1
-
16
-
-
44849092474
-
The new paradigm of flow cell sequencing
-
Holt RA, Jones SJ (2008) The new paradigm of flow cell sequencing. Genome Res 18:839-846.
-
(2008)
Genome Res
, vol.18
, pp. 839-846
-
-
Holt, R.A.1
Jones, S.J.2
-
17
-
-
39749108026
-
Next-generation sequencing: The race is on
-
von Bubnoff A (2008) Next-generation sequencing: The race is on. Cell 132:721-723.
-
(2008)
Cell
, vol.132
, pp. 721-723
-
-
von Bubnoff, A.1
-
18
-
-
45849130924
-
Emerging DNA sequencing technologies for human genomic medicine
-
Strausberg RL, Levy S, Rogers YH (2008) Emerging DNA sequencing technologies for human genomic medicine. Drug Discov Today 13:569-577.
-
(2008)
Drug Discov Today
, vol.13
, pp. 569-577
-
-
Strausberg, R.L.1
Levy, S.2
Rogers, Y.H.3
-
19
-
-
50649089207
-
RNA-seq: An assessment of technical reproducibility and comparison with gene expression arrays
-
Marioni JC, Mason CE, Mane SM, Stephens M, Gilad Y (2008) RNA-seq: An assessment of technical reproducibility and comparison with gene expression arrays. Genome Res 18:1509-1517.
-
(2008)
Genome Res
, vol.18
, pp. 1509-1517
-
-
Marioni, J.C.1
Mason, C.E.2
Mane, S.M.3
Stephens, M.4
Gilad, Y.5
-
20
-
-
46249106990
-
Mapping and quantifying mammalian transcriptomes by RNA-Seq
-
Mortazavi A, Williams BA, McCue K, Schaeffer L, Wold B (2008) Mapping and quantifying mammalian transcriptomes by RNA-Seq. Nat Methods 5:621-628.
-
(2008)
Nat Methods
, vol.5
, pp. 621-628
-
-
Mortazavi, A.1
Williams, B.A.2
McCue, K.3
Schaeffer, L.4
Wold, B.5
-
21
-
-
45549088326
-
The transcriptional landscape of the yeast genome definedby RNA sequencing
-
Nagalakshmi U, et al. (2008) The transcriptional landscape of the yeast genome definedby RNA sequencing. Science 320:1344-1349.
-
(2008)
Science
, vol.320
, pp. 1344-1349
-
-
Nagalakshmi, U.1
-
22
-
-
47649124124
-
A global view of gene activity and alternative splicing by deep sequencing of the human transcriptome
-
Sultan M, et al. (2008) A global view of gene activity and alternative splicing by deep sequencing of the human transcriptome. Science 321:956-960.
-
(2008)
Science
, vol.321
, pp. 956-960
-
-
Sultan, M.1
-
23
-
-
46249096804
-
Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution
-
Wilhelm BT, et al. (2008) Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution. Nature 453:1239-1243.
-
(2008)
Nature
, vol.453
, pp. 1239-1243
-
-
Wilhelm, B.T.1
-
24
-
-
34250376884
-
A framework for collaborative analysis of ENCODE data: Making large-scale analyses biologist-friendly
-
Blankenberg D, et al. (2007) A framework for collaborative analysis of ENCODE data: Making large-scale analyses biologist-friendly. Genome Res 17:960-964.
-
(2007)
Genome Res
, vol.17
, pp. 960-964
-
-
Blankenberg, D.1
-
25
-
-
25844449770
-
Galaxy: A platform for interactive large-scale genome analysis
-
Giardine B, et al. (2005) Galaxy: A platform for interactive large-scale genome analysis. Genome Res 15:1451-1455.
-
(2005)
Genome Res
, vol.15
, pp. 1451-1455
-
-
Giardine, B.1
-
26
-
-
0031978181
-
Base-calling of automated sequencer traces using phred. II. Error probabilities
-
Ewing B, Green P (1998) Base-calling of automated sequencer traces using phred. II. Error probabilities. Genome Res 8:186-194.
-
(1998)
Genome Res
, vol.8
, pp. 186-194
-
-
Ewing, B.1
Green, P.2
-
27
-
-
55549089660
-
Accurate whole human genome sequencing using reversible terminator chemistry
-
Bentley DR, et al. (2008) Accurate whole human genome sequencing using reversible terminator chemistry. Nature 456:53-59.
-
(2008)
Nature
, vol.456
, pp. 53-59
-
-
Bentley, D.R.1
-
28
-
-
41249096306
-
Using quality scores and longer reads improves accuracy of Solexa read mapping
-
Smith AD, Xuan Z, Zhang MQ (2008) Using quality scores and longer reads improves accuracy of Solexa read mapping. BMC Bioinformatics 9:128.
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 128
-
-
Smith, A.D.1
Xuan, Z.2
Zhang, M.Q.3
-
29
-
-
33646133653
-
The UCSC known genes
-
Hsu F, et al. (2006) The UCSC known genes. Bioinformatics 22:1036-1046.
-
(2006)
Bioinformatics
, vol.22
, pp. 1036-1046
-
-
Hsu, F.1
-
30
-
-
0036079158
-
The human genome browser at UCSC
-
Kent WJ, et al. (2002) The human genome browser at UCSC. Genome Res 12:996-1006.
-
(2002)
Genome Res
, vol.12
, pp. 996-1006
-
-
Kent, W.J.1
-
31
-
-
34250305146
-
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
-
Birney E, et al. (2007) Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project. Nature 447:799-816.
-
(2007)
Nature
, vol.447
, pp. 799-816
-
-
Birney, E.1
-
32
-
-
56549101959
-
Alternative isoform regulation in human tissue transcriptomes
-
Wang ET, et al. (2008) Alternative isoform regulation in human tissue transcriptomes. Nature 456:470-476.
-
(2008)
Nature
, vol.456
, pp. 470-476
-
-
Wang, E.T.1
-
33
-
-
0035369112
-
NMDA receptor subunits: Diversity, development and disease
-
Cull-Candy S, Brickley S, Farrant M (2001) NMDA receptor subunits: Diversity, development and disease. Curr Opin Neurobiol 11:327-335.
-
(2001)
Curr Opin Neurobiol
, vol.11
, pp. 327-335
-
-
Cull-Candy, S.1
Brickley, S.2
Farrant, M.3
-
34
-
-
19944401504
-
Mouse brain organization revealed through direct genome-scale TF expression analysis
-
Gray PA, et al. (2004) Mouse brain organization revealed through direct genome-scale TF expression analysis. Science 306:2255-2257.
-
(2004)
Science
, vol.306
, pp. 2255-2257
-
-
Gray, P.A.1
-
35
-
-
48449089927
-
Experience-dependent transfer of Otx2 homeoprotein into the visual cortex activates postnatal plasticity
-
Sugiyama S, et al. (2008) Experience-dependent transfer of Otx2 homeoprotein into the visual cortex activates postnatal plasticity. Cell 134:508-520.
-
(2008)
Cell
, vol.134
, pp. 508-520
-
-
Sugiyama, S.1
-
36
-
-
48249110960
-
Wnt signaling in neural circuit assembly
-
Salinas PC, Zou Y (2008) Wnt signaling in neural circuit assembly. Annu Rev Neurosci 31:339-358.
-
(2008)
Annu Rev Neurosci
, vol.31
, pp. 339-358
-
-
Salinas, P.C.1
Zou, Y.2
-
37
-
-
21044450377
-
Novel brain wiring functions for classical morphogens: A role as graded positional cues in axon guidance
-
Charron F, Tessier-Lavigne M (2005) Novel brain wiring functions for classical morphogens: A role as graded positional cues in axon guidance. Development 132:2251-2262.
-
(2005)
Development
, vol.132
, pp. 2251-2262
-
-
Charron, F.1
Tessier-Lavigne, M.2
-
38
-
-
34548087852
-
A novel role for autophagy in neurodevelopment
-
Cecconi F, et al. (2007) A novel role for autophagy in neurodevelopment. Autophagy 3:506-508.
-
(2007)
Autophagy
, vol.3
, pp. 506-508
-
-
Cecconi, F.1
-
39
-
-
34347344990
-
Ambra1 regulates autophagy and development of the nervous system
-
Fimia GM, et al. (2007) Ambra1 regulates autophagy and development of the nervous system. Nature 447:1121-1125.
-
(2007)
Nature
, vol.447
, pp. 1121-1125
-
-
Fimia, G.M.1
-
40
-
-
4644370139
-
Early neural cell death: Dying to become neurons
-
Yeo W, Gautier J (2004) Early neural cell death: Dying to become neurons. Dev Biol 274:233-244.
-
(2004)
Dev Biol
, vol.274
, pp. 233-244
-
-
Yeo, W.1
Gautier, J.2
-
41
-
-
4544341015
-
-
Smyth GK (2004) Linear models and empirical bayes methods for assessing differential expression in microarray experiments. Statistl Appl. Genet. Mol. Biol. 3:Article3.
-
Smyth GK (2004) Linear models and empirical bayes methods for assessing differential expression in microarray experiments. Statistl Appl. Genet. Mol. Biol. 3:Article3.
-
-
-
|