-
2
-
-
0024236673
-
The mechanism of conservative site-specific recombination
-
Craig, N. L. 1988. The mechanism of conservative site-specific recombination. Annu. Rev. Genet. 22:77-105.
-
(1988)
Annu. Rev. Genet
, vol.22
, pp. 77-105
-
-
Craig, N.L.1
-
4
-
-
0020024244
-
Molecular mechanisms in genetic recombination
-
Dressler, D., and H. Potter. 1982. Molecular mechanisms in genetic recombination. Annu. Rev. Biochem. 51:727-761.
-
(1982)
Annu. Rev. Biochem
, vol.51
, pp. 727-761
-
-
Dressler, D.1
Potter, H.2
-
5
-
-
84959678845
-
Mechanism for gene conversion in fungi
-
Holliday, R. 1964. Mechanism for gene conversion in fungi. Genet. Res. 5:282-304.
-
(1964)
Genet. Res
, vol.5
, pp. 282-304
-
-
Holliday, R.1
-
6
-
-
0023731938
-
A Holliday recombination intermediate is twofold symmetric
-
Churchill, M. E. A., T. D. Tullius, N. R. Kallenbach, and N. C. Seeman. 1988. A Holliday recombination intermediate is twofold symmetric. Proc. Natl. Acad. Sci. USA. 85:4653-4656.
-
(1988)
Proc. Natl. Acad. Sci. USA
, vol.85
, pp. 4653-4656
-
-
Churchill, M.E.A.1
Tullius, T.D.2
Kallenbach, N.R.3
Seeman, N.C.4
-
7
-
-
0023551842
-
Gel electrophoretic analysis of the geometry of a DNA 4-way junction
-
Cooper, J. P., and P. J. Hagerman. 1987. Gel electrophoretic analysis of the geometry of a DNA 4-way junction. J. Mol. Biol. 198:711-719.
-
(1987)
J. Mol. Biol
, vol.198
, pp. 711-719
-
-
Cooper, J.P.1
Hagerman, P.J.2
-
9
-
-
0027976675
-
The solution structure of the 4-way DNA junction at low salt conditions - a fluorescence resonance energy transfer analysis
-
Clegg, R. M., A. I. Murchie, and D. M. J. Lilley. 1994. The solution structure of the 4-way DNA junction at low salt conditions - a fluorescence resonance energy transfer analysis. Biophys. J. 66:99-109.
-
(1994)
Biophys. J
, vol.66
, pp. 99-109
-
-
Clegg, R.M.1
Murchie, A.I.2
Lilley, D.M.J.3
-
10
-
-
0033575066
-
Designed two-dimensional DNA Holliday junction arrays visualized by atomic force microscopy
-
Mao, C., W. Sun, and N. C. Seeman. 1999. Designed two-dimensional DNA Holliday junction arrays visualized by atomic force microscopy. J. Am. Chem. Soc. 121:5437-5443.
-
(1999)
J. Am. Chem. Soc
, vol.121
, pp. 5437-5443
-
-
Mao, C.1
Sun, W.2
Seeman, N.C.3
-
11
-
-
0033834654
-
Atomic force microscopy of parallel DNA branched junction arrays
-
Sha, R., F. Liu,D. P.Millar, andN. C.Seeman. 2000.Atomic force microscopy of parallel DNA branched junction arrays. Chem. Biol. 7:743-751.
-
(2000)
Chem. Biol
, vol.7
, pp. 743-751
-
-
Sha, R.F.1
Liu, D.2
Millar, P.3
andN4
Seeman, C.5
-
12
-
-
0035366324
-
The crystal structures of DNA Holliday junctions
-
Ho, P. S., and B. F. Eichman. 2001. The crystal structures of DNA Holliday junctions. Curr. Opin. Struct. Biol. 11:302-308.
-
(2001)
Curr. Opin. Struct. Biol
, vol.11
, pp. 302-308
-
-
Ho, P.S.1
Eichman, B.F.2
-
13
-
-
0015527750
-
Genetic recombination - nature of a crossed strand exchange between 2 homologous DNA molecules
-
Sigel, N., and B. Alberts. 1972. Genetic recombination - nature of a crossed strand exchange between 2 homologous DNA molecules. J. Mol. Biol. 71:789-793.
-
(1972)
J. Mol. Biol
, vol.71
, pp. 789-793
-
-
Sigel, N.1
Alberts, B.2
-
14
-
-
17644373802
-
Observing spontaneous branch migration of Holliday junctions one step at a time
-
McKinney, S. A., A. D. J. Freeman, D. M. J. Lilley, and T. J. Ha. 2005. Observing spontaneous branch migration of Holliday junctions one step at a time. Proc. Natl. Acad. Sci. USA. 102:5715-5720.
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 5715-5720
-
-
McKinney, S.A.1
Freeman, A.D.J.2
Lilley, D.M.J.3
Ha, T.J.4
-
15
-
-
0028247038
-
Chromosome pairing via multiple interstitial interactions before and during meiosis in yeast
-
Weiner, B. M., and N. Kleckner. 1994. Chromosome pairing via multiple interstitial interactions before and during meiosis in yeast. Cell. 77:977-991.
-
(1994)
Cell
, vol.77
, pp. 977-991
-
-
Weiner, B.M.1
Kleckner, N.2
-
16
-
-
0027821288
-
Potential advantages of unstable interactions for pairing of chromosomes in meiotic, somatic and premeiotic cells
-
Kleckner, N., and B. M. Weiner. 1993. Potential advantages of unstable interactions for pairing of chromosomes in meiotic, somatic and premeiotic cells. Cold Spring Harb. Symp. Quant. Biol. 58:553-565.
-
(1993)
Cold Spring Harb. Symp. Quant. Biol
, vol.58
, pp. 553-565
-
-
Kleckner, N.1
Weiner, B.M.2
-
17
-
-
85031368269
-
-
Reference deleted in proof
-
Reference deleted in proof.
-
-
-
-
18
-
-
1242336834
-
Paranemic crossover DNA: A generalized Holliday structure with applications in nanotechnology
-
Shen, Z., H. Yan, T. Wang, and N. C. Seeman. 2004. Paranemic crossover DNA: a generalized Holliday structure with applications in nanotechnology. J. Am. Chem. Soc. 126:1666-1674.
-
(2004)
J. Am. Chem. Soc
, vol.126
, pp. 1666-1674
-
-
Shen, Z.1
Yan, H.2
Wang, T.3
Seeman, N.C.4
-
19
-
-
0002721431
-
Nicks and nodes and nanotechnology
-
Seeman, N. C. 2001. Nicks and nodes and nanotechnology. Nano Lett. 1:22-26.
-
(2001)
Nano Lett
, vol.1
, pp. 22-26
-
-
Seeman, N.C.1
-
20
-
-
0026552128
-
Thermodynamics of DNA chain branching
-
Lu, M., Q. Guo, L. A. Marky, N. C. Seeman, and N. R. Kallenbach. 1992. Thermodynamics of DNA chain branching. J. Mol. Biol. 223:781-789.
-
(1992)
J. Mol. Biol
, vol.223
, pp. 781-789
-
-
Lu, M.1
Guo, Q.2
Marky, L.A.3
Seeman, N.C.4
Kallenbach, N.R.5
-
21
-
-
0023407434
-
The melting behavior of a nucleic acid junction: A calorimetric and spectroscopic study
-
Marky, L. A., N. R. Kallenbach, K. A. McDonough, N. C. Seeman, and K. J. Breslauer. 1987. The melting behavior of a nucleic acid junction: a calorimetric and spectroscopic study. Biopolymers. 26:1621-1634.
-
(1987)
Biopolymers
, vol.26
, pp. 1621-1634
-
-
Marky, L.A.1
Kallenbach, N.R.2
McDonough, K.A.3
Seeman, N.C.4
Breslauer, K.J.5
-
23
-
-
0037032223
-
Paranemic cohesion of topologically closed DNA molecules
-
Zhang, X., H. Yan, Z. Shen, and N. C. Seeman. 2002. Paranemic cohesion of topologically closed DNA molecules. J. Am. Chem. Soc. 124:12940-12941.
-
(2002)
J. Am. Chem. Soc
, vol.124
, pp. 12940-12941
-
-
Zhang, X.1
Yan, H.2
Shen, Z.3
Seeman, N.C.4
-
24
-
-
1342325559
-
A 1.7-kilobase single-stranded DNA that folds into a nanoscale octahedron
-
Shih, W. M., J. D. Quispe, and G. F. Joyce. 2004. A 1.7-kilobase single-stranded DNA that folds into a nanoscale octahedron. Nature. 427:618-621.
-
(2004)
Nature
, vol.427
, pp. 618-621
-
-
Shih, W.M.1
Quispe, J.D.2
Joyce, G.F.3
-
25
-
-
0037011984
-
A robust DNA mechanical device controlled by hybridization topology
-
Yan, H., X. Zhang, Z. Shen, and N. C. Seeman. 2002. A robust DNA mechanical device controlled by hybridization topology. Nature. 415:62-65.
-
(2002)
Nature
, vol.415
, pp. 62-65
-
-
Yan, H.1
Zhang, X.2
Shen, Z.3
Seeman, N.C.4
-
26
-
-
10844292641
-
Translation of DNA signals into polymer assembly instructions
-
Liao, S., and N. C. Seeman. 2004. Translation of DNA signals into polymer assembly instructions. Science. 306:2072-2074.
-
(2004)
Science
, vol.306
, pp. 2072-2074
-
-
Liao, S.1
Seeman, N.C.2
-
27
-
-
33845458252
-
Operation of a DNA robot arm inserted into a 2D DNA crystalline substrate
-
Ding, B., and N. C. Seeman. 2006. Operation of a DNA robot arm inserted into a 2D DNA crystalline substrate. Science. 314:1583-1585.
-
(2006)
Science
, vol.314
, pp. 1583-1585
-
-
Ding, B.1
Seeman, N.C.2
-
28
-
-
33646139659
-
Atomic-level simulations of Seeman DNA nanostructures: The paranemic crossover in salt solution
-
Maiti, P. K., T. A. Pascal, N. Vaidehi, J. Heo, and W. A. Goddard. 2006. Atomic-level simulations of Seeman DNA nanostructures: the paranemic crossover in salt solution. Biophys. J. 90:1463-1479.
-
(2006)
Biophys. J
, vol.90
, pp. 1463-1479
-
-
Maiti, P.K.1
Pascal, T.A.2
Vaidehi, N.3
Heo, J.4
Goddard, W.A.5
-
29
-
-
11344265955
-
The stability of Seeman JX DNA topoisomers of paranemic crossover (PX) molecules as a function of crossover number
-
Maiti, P. K., T. A. Pascal, N. Vaidehi, and W. A. Goddard. 2004. The stability of Seeman JX DNA topoisomers of paranemic crossover (PX) molecules as a function of crossover number. Nucleic Acids Res. 32:6047-6056.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 6047-6056
-
-
Maiti, P.K.1
Pascal, T.A.2
Vaidehi, N.3
Goddard, W.A.4
-
30
-
-
0027255843
-
DNA double crossover molecules
-
Fu, T.-J., and N. C. Seeman. 1993. DNA double crossover molecules. Biochemistry. 32:3211-3220.
-
(1993)
Biochemistry
, vol.32
, pp. 3211-3220
-
-
Fu, T.-J.1
Seeman, N.C.2
-
31
-
-
0028972024
-
Identification of double Holliday junctions as intermediates in meiotic recombination
-
Schwacha, A., and N. Kleckner. 1995. Identification of double Holliday junctions as intermediates in meiotic recombination. Cell. 83:783-791.
-
(1995)
Cell
, vol.83
, pp. 783-791
-
-
Schwacha, A.1
Kleckner, N.2
-
32
-
-
0018348464
-
2-Dimensional fractionation of DNA restriction fragments in polyacrylamide gels
-
Fischer, S. G., and L. S. Lerman. 1979. 2-Dimensional fractionation of DNA restriction fragments in polyacrylamide gels. Cell. 16:191-200.
-
(1979)
Cell
, vol.16
, pp. 191-200
-
-
Fischer, S.G.1
Lerman, L.S.2
-
33
-
-
0032539693
-
A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics
-
SantaLucia, J. 1998. A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics. Proc. Natl. Acad. Sci. USA. 95:1460-1465.
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 1460-1465
-
-
SantaLucia, J.1
-
34
-
-
0017836908
-
Statistical mechanical deconvolution of thermal transitions in macromolecules 1. Theory and application to homogeneous systems
-
Freire, E., and R. L. Biltonen. 1978. Statistical mechanical deconvolution of thermal transitions in macromolecules 1. Theory and application to homogeneous systems. Biopolymers. 17:463-479.
-
(1978)
Biopolymers
, vol.17
, pp. 463-479
-
-
Freire, E.1
Biltonen, R.L.2
-
35
-
-
0017887322
-
Statistical mechanical deconvolution of thermal transitions inmacromolecules 3. Application to double-stranded to single-stranded transitions of nucleic acids
-
Freire, E., and R. L. Biltonen. 1978. Statistical mechanical deconvolution of thermal transitions inmacromolecules 3. Application to double-stranded to single-stranded transitions of nucleic acids. Biopolymers. 17:497-510.
-
(1978)
Biopolymers
, vol.17
, pp. 497-510
-
-
Freire, E.1
Biltonen, R.L.2
-
36
-
-
35448961952
-
Differential scanning calorimetry
-
Spink, C. H. 2008. Differential scanning calorimetry. Methods Cell Biol. 84:115-141.
-
(2008)
Methods Cell Biol
, vol.84
, pp. 115-141
-
-
Spink, C.H.1
-
37
-
-
0026807035
-
Use of denaturing gradient gel electrophoresis to study conformational transitions in nucleic acids
-
Abrams, E. S., and V. P. Stanton. 1992. Use of denaturing gradient gel electrophoresis to study conformational transitions in nucleic acids. Methods Enzymol. 212:71-104.
-
(1992)
Methods Enzymol
, vol.212
, pp. 71-104
-
-
Abrams, E.S.1
Stanton, V.P.2
-
38
-
-
0034658244
-
A study on the enthalpy-entropy compensation in protein unfolding
-
Liu, L., C. Yang, and Q. X. Guo. 2000. A study on the enthalpy-entropy compensation in protein unfolding. Biophys. Chem. 84:239-251.
-
(2000)
Biophys. Chem
, vol.84
, pp. 239-251
-
-
Liu, L.1
Yang, C.2
Guo, Q.X.3
-
39
-
-
0028963346
-
Enthalpy-entropy compensation in DNA melting thermodynamics
-
Petruska, J., and M. F. Goodman. 1995. Enthalpy-entropy compensation in DNA melting thermodynamics. J. Biol. Chem. 270:746-750.
-
(1995)
J. Biol. Chem
, vol.270
, pp. 746-750
-
-
Petruska, J.1
Goodman, M.F.2
-
40
-
-
0027395923
-
Volume changes correlate with entropies and enthalpies in the formation of nucleic acid homoduplexes - differential hydration of A-conformation and B-conformation
-
Rentzeperis, D., D. W. Kupke, and L. A. Marky. 1993. Volume changes correlate with entropies and enthalpies in the formation of nucleic acid homoduplexes - differential hydration of A-conformation and B-conformation. Biopolymers. 33:117-125.
-
(1993)
Biopolymers
, vol.33
, pp. 117-125
-
-
Rentzeperis, D.1
Kupke, D.W.2
Marky, L.A.3
-
41
-
-
0017820499
-
Thermodynamic analysis of ion effects on binding and conformational equilibria of proteins and nucleic acids - roles of ion association or release, screening and ion effects on water activity
-
Record, M. T., C. F. Anderson, and T. M. Lohman. 1978. Thermodynamic analysis of ion effects on binding and conformational equilibria of proteins and nucleic acids - roles of ion association or release, screening and ion effects on water activity. Q. Rev. Biophys. 11:103-178.
-
(1978)
Q. Rev. Biophys
, vol.11
, pp. 103-178
-
-
Record, M.T.1
Anderson, C.F.2
Lohman, T.M.3
-
42
-
-
0026616638
-
25Mg spin relaxation in Mg-DNA solutions - temperature variation and chemical exchange effects
-
25Mg spin relaxation in Mg-DNA solutions - temperature variation and chemical exchange effects. Biopolymers. 32:1339-1350.
-
(1992)
Biopolymers
, vol.32
, pp. 1339-1350
-
-
Berggren, E.1
Nordenskold, L.2
Braulin, W.H.3
-
43
-
-
0001533502
-
Measurement of the repulsive force between poly-electrolyte molecules in ionic solution - hydration forces between parallel double helices
-
Rau, D. C., B. Lee, and V. A. Parsegian. 1984. Measurement of the repulsive force between poly-electrolyte molecules in ionic solution - hydration forces between parallel double helices. Proc. Natl. Acad. Sci. USA. 81:2621-2625.
-
(1984)
Proc. Natl. Acad. Sci. USA
, vol.81
, pp. 2621-2625
-
-
Rau, D.C.1
Lee, B.2
Parsegian, V.A.3
-
44
-
-
0000198963
-
Measured entropy and enthalpy of hydration as a function of distance between DNA double helices
-
Leikin, S., D. A. Rau, and V. A. Parsegian. 1991. Measured entropy and enthalpy of hydration as a function of distance between DNA double helices. Phys. Rev. A. 44:5272-5278.
-
(1991)
Phys. Rev. A
, vol.44
, pp. 5272-5278
-
-
Leikin, S.1
Rau, D.A.2
Parsegian, V.A.3
-
45
-
-
0018292177
-
Nick-free formation of reciprocal heteroduplexes - simple solution to the topological problem
-
Wilson, J. H. 1979. Nick-free formation of reciprocal heteroduplexes - simple solution to the topological problem. Proc. Natl. Acad. Sci. USA. 76:3641-3645.
-
(1979)
Proc. Natl. Acad. Sci. USA
, vol.76
, pp. 3641-3645
-
-
Wilson, J.H.1
-
46
-
-
0015242770
-
Models of specifically paired like (homologous) nucleic acid structures
-
McGavin, S. 1971. Models of specifically paired like (homologous) nucleic acid structures. J. Mol. Biol. 55:293-298.
-
(1971)
J. Mol. Biol
, vol.55
, pp. 293-298
-
-
McGavin, S.1
-
47
-
-
33846095964
-
Self-assembly of double-stranded DNA molecules at nanomolar concentrations
-
Inoue, S., S. Sugiyama, A. A. Travers, and T. Oyama. 2007. Self-assembly of double-stranded DNA molecules at nanomolar concentrations. Biochemistry. 46:164-171.
-
(2007)
Biochemistry
, vol.46
, pp. 164-171
-
-
Inoue, S.1
Sugiyama, S.2
Travers, A.A.3
Oyama, T.4
-
48
-
-
39149138419
-
DNA double helices recognize mutual sequence homology in a protein free environment
-
Baldwin, G. S., N. J. Brooks, R. E. Robson, A. Wynveen, A. Goldar, et al. 2008. DNA double helices recognize mutual sequence homology in a protein free environment. J. Phys. Chem. B. 112:1060-1064.
-
(2008)
J. Phys. Chem. B
, vol.112
, pp. 1060-1064
-
-
Baldwin, G.S.1
Brooks, N.J.2
Robson, R.E.3
Wynveen, A.4
Goldar, A.5
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