A study on the enthalpy-entropy compensation in protein unfolding

Biophysical Chemistry

Volumn 84, Issue 3, 2000, Pages 239-251

  Liu, Lei ^a,b   Yang, Chao ^a   Guo, Qing Xiang ^a  

^a UNIVERSITY OF SCIENCE AND TECHNOLOGY OF CHINA   (China)

^b Och Spine at New York Presbyterian Hospitals   (United States)

Author keywords

Enthalpy and entropy convergence; Enthalpy entropy compensation; Protein unfolding; Solvent reorganization

Indexed keywords

ARTICLE; ENERGY TRANSFER; ENTHALPY; ENTROPY; PRIORITY JOURNAL; PROTEIN FOLDING; THERMODYNAMICS;

CALORIMETRY, DIFFERENTIAL SCANNING; ENTROPY; MODELS, CHEMICAL; PROTEIN DENATURATION; PROTEIN FOLDING; PROTEINS; SOLVENTS; THERMODYNAMICS; WATER;

EID: 0034658244     PISSN: 03014622     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0301-4622(00)00130-7     Document Type: Article

References (135)

1. Wu H. Chin. J. Physiol. 5:1931;321-344.
2. Tanford C. Adv. Protein Chem. 23:1968;121-242.
3. Tanford C. Adv. Protein Chem. 24:1970;1-95.
4. Karplus M., Sali A. Curr. Opin. Struct. Biol. 5:1995;58-73.
5. Dobson C.M., Sali A., Karplus M. Angew. Chem. Int. Ed. Engl. 37:1998;868-893.
6. Dill K.A. Biochemistry. 29:1990;7133-7155.
7. Hvidt A., Westh P.J. Solution Chem. 27:1998;395-402.
8. Privalov P.L., Gill S.J. Adv. Protein Chem. 39:1988;191-233.
9. Eftink M.R., Ionescu R. Biophys. Chem. 64:1997;175-197.
10. Murphy K.P., Privalov P.L., Gill S.J. Science. 247:1990;559-561.
11. Yang A.-S., Sharp K.A., Honig B. J. Mol. Biol. 227:1992;889-900.
12. Makhatadze G.I., Privalov P.L. Adv. Protein Chem. 47:1995;307-425.
13. Gomez J., Hilser V.J., Xie D., Freire E. Proteins. 22:1995;404-412.
14. Makhatadze G.I., Privalov P.L. Protein Sci. 5:1996;507-510.
15. Lumry R., Biltonen R., Brandts J.F. Biopolymers. 4:1966;917-944.
16. Becktel W.J., Schellman J.A. Biopolymers. 26:1987;1859-1877.
17. Hao M.-H., Scheraga H.A. Acc. Chem. Res. 31:1998;433-440.
18. Sturtevant J.M., Gill S.J. Ann. Rev. Phys. Chem. 38:1987;463.
19. Privalov P.L., Gill S.J. Adv. Protein Chem. 39:1989;191.
20. Milardi D., Rosa C.L., Grasso D. Biophys. Chem. 62:1996;95-108.
21. Privalov P.L. Ann. Rev. Biophys. Chem. 18:1989;47-69.
22. Privalov P.L., Makhatadze G.I. J. Mol. Biol. 213:1990;385-391.
23. Schellman J.A. Biophys. J. 73:1997;2960-2964.
24. Lumry R., Rajender S. Biopolymers. 9:1970;1125-1227.
25. Dunitz J.D. Chem. Biol. 2:1995;709-712.
26. Exner O. Nature. 201:1964;488.
27. Krugg R.R., Hunter W.G., Grieger R.A. J. Phys. Chem. 80:1976;2335.
28. Krugg R.R., Hunter W.G., Grieger R.A. J. Phys. Chem. 80:1976;2341.
29. Krugg R.R., Hunter W.G., Grieger R.A. Nature. 261:1976;566.
30. Mallardi A., Giustini M., Palazzo G.J. Phys. Chem. B. 102:1998;9168-9173.
31. Schellman J.O., Lindorfer M., Hawkes R., Grutter M. Biopolymers. 20:1981;1989-1999.
32. Hawkes R., Gruttler M.G., Schellman J. J. Mol. Biol. 268:1997;195-212.
33. Shortle D., Meeker A.K., Freire E. Biochemistry. 27:1988;4761-4768.
34. Makhatadze G.I., Clore G.M., Gronenborn A.M. Nature Struct. Biol. 2:1995;852-855.
35. Johnson C.M., Oliveberg M., Clarke J., Fersht A.R. J. Mol. Biol. 268:1997;198-208.
36. McBane G.C. J. Chem. Educ. 75:1998;919-922.
37. Gallicchio E., Kubo M.M., Levy R.M. J. Am. Chem. Soc. 120:1998;4526-4527.
38. Conners K.A. Chem. Rev. 97:1997;1325-1357.
39. Rekharsky M.V., Inoue Y. Chem. Rev. 98:1998;1875-1919.
40. Melander W.R. Chem. Phys. Lett. 28:1974;114.
41. Patterson D., Barbe M. J. Phys. Chem. 80:1976;2435.
42. Boots H.M.J., de Bokx P.K. J. Phys. Chem. 93:1989;8240-8243.
43. Fishman A.I., Stolov A.A. Spectrochim. Acta. 46A:1990;1037-1043.
44. Searle M.S., Westwell M.S., Williams D.H. J. Chem. Soc. Perkin Trans. 2:1995;141-151.
45. Westwell M.S., Searle M.S., Klein J., Williams D.H. J. Phys. Chem. 100:1996;16000-16001.
46. Vailaya A., Horváth C. Biophys. Chem. 62:1996;81.
47. Vailaya A., Horváth C. J. Phys. Chem. 100:1993;2447.
48. Vailaya A., Horváth C. J. Phys. Chem. B. 102:1998;701-718.
49. Qian H., Hopfield J.J. J. Chem. Phys. 105:1996;9292-9298.
50. Qian H. J. Chem. Phys. 109:1998;10015-10017.
51. Ben-Naim B. Biopolymers. 31:1991;993-1008.
52. Yu H.-A., Karplus M. J. Chem. Phys. 89:1988;2366-2379.
53. Lee B. Biopolymers. 31:1991;993-1008.
54. Lee B. Biophys. Chem. 51:1994;271-278.
55. Lee B. Methods Enzymol. 259:1995;555-576.
56. Grunwald E. J. Am. Chem. Soc. 108:1986;5726-5731.
57. Grunwald E., Comeford L.L. Gregory R.B. Protein-Solvent Interactions. 1995;Marcel Dekker Inc, New York.
58. Grunwald E., Steel C. J. Am. Chem. Soc. 117:1995;5687-5692.
59. Grunwald E. Thermodynamics of Molecular Species. 1997;John Wiley, New York.
60. Grunwald E., Steel C. Pure Appl. Chem. 65:1993;2543-2549.
61. Grunwald E., Steel C. J. Phys. Chem. 97:1993;13326-13329.
62. Grunwald E., Steel C. J. Phys. Org. Chem. 7:1994;734-742.
63. Christian S.D. J. Chem. Educ. 39:1962;521.
64. de Heer J. J. Chem. Educ. 63:1986;950.
65. Pimentel C.C., McClennan A.L. Ann. Rev. Phys. Chem. 22:1971;347-385.
66. Muller N. J. Solution Chem. 17:1988;661-672.
67. Lee B., Graziano G. J. Am. Chem. Soc. 118:1996;5163-5168.
68. Herzfeld J. Science. 253:1991;88-88.
69. Muller N. Acc. Chem. Res. 23:1990;23-28.
70. Blokzijil W., Engberts J.B.F.N. Angew. Chem. Int. Ed. Engl. 32:1993;1545-1579.
71. Finney J.L. Faraday Discuss. 103:1996;1-18.
72. Frank H.S., Evans M.W. J. Chem. Phys. 13:1945;507-532.
73. Glew D.N. J. Phys. Chem. 66:1962;605.
74. Wilhelm E., Battino R., Wilcock R. J. Chem. Rev. 77:1977;219.
75. Kauzman W. Adv. Protein Chem. 14:1959;1-63.
76. Némethy G., Scheraga H.A. J. Chem. Phys. 36:1962;3382-3400.
77. Némethy G., Scheraga H.A. J. Chem. Phys. 36:1962;3401-3417.
78. Némethy G., Scheraga H.A. Angew. Chem. 66:1962;605.
79. Stryer L. Biochemistry, 2nd ed. 1981;Freeman, San Francisco.
80. Schneider H.-J. Angew. Chem. Int. Ed. Engl. 30:1991;1417-1436.
81. Lemieux R.U. Acc. Chem. Res. 29:1996;373-380.
82. Finney J.L., Soper A.K. Chem. Soc. Rev. 23:1994;1.
83. Jorgensen W.L. J. Chem. Phys. 77:1982;5757.
84. Jorgensen W.L., Gao J., Ravimohan C. J. Phys. Chem. 89:1985;3470.
85. Rashin A.A. J. Phys. Chem. 94:1990;1725.
86. Rashin A.A., Bukatin M.A. J. Phys. Chem. 95:1991;2942.
87. Haymet A.D.J., Silverstein K.A.T., Dill K.A. Faraday Discuss. 103:1996;117-124.
88. Miller K.W., Hildebrand J.H. J. Am. Chem. Soc. 90:1968;3001.
89. Howarth O.W. J. Chem. Soc. Faraday Trans. 1. 71:1975;2303.
90. Lee B. Biopolymers. 24:1985;813-823.
91. Dill K.A., Alonso D.O.V., Hutchinson K. Biochemistry. 28:1989;5439.
92. Creamer T.P., Rose G.D. Proc. Natl. Acad. Sci. USA. 89:1992;5937.
93. Pickett S.D., Sternberg M.J.E. J. Mol. Biol. 231:1993;825.
94. Lee K.H., Xie D., Freire E., Amzel L.M. Proteins. 20:1994;68-84.
95. Murphy K.P., Freire E. Adv. Protein Chem. 43:1992;313-361.
96. Privalov P.L., Makhatadze G.I. J. Mol. Biol. 232:1993;660-679.
97. Baldwin R.L. Proc. Natl. Acad. Sci. USA. 83:1986;8069-8072.
98. Kauzmann W. Nature. 325:1987;763-764.
99. Lee B. Proc. Natl. Acad. Sci. USA. 88:1991;5154-5158.
100. Murphy K.P., Gill S.J. Thermochim. Acta. 172:1990;11-20.
101. Murphy K.P., Gill S.J. J. Mol. Biol. 222:1991;699-709.
102. Radzicka A., Wolfenden R. Biochemistry. 27:1988;1664.
103. Spolar R.S., Livingstone J.R., Record M.T. Jr. Biochemistry. 31:1992;3947-3955.
104. Murphy K.P. Biophys. Chem. 51:1994;311-326.
105. Baldwin R.L., Muller N. Proc. Natl. Acad. Sci. USA. 89:1992;7110-7113.
106. Doig A.J., Williams D.H. Biochemistry. 31:1992;9371-9375.
107. Fu L., Freire E. Proc. Natl. Acad. Sci. USA. 89:1992;9335-9338.
108. Ragone R., Colonna G. J. Biol. Chem. 269:1994;4047-4049.
109. Ragone R., Colonna G. J. Am. Chem. Soc. 116:1994;2677-2678.
110. Makhatadze G.I., Privalov P.L. J. Mol. Biol. 232:1993;639-659.
111. Ragone R., Stiuso P., Colonna G. Thermochim. Acta. 251:1995;371-377.
112. Ragone R., Colonna G. J. Am. Chem. Soc. 117:1995;16-20.
113. Ragone R., Stiuso P., Colonna G. Proteins. 24:1996;388-393.
114. Grazianoo G., Catanzano F., Barone G. Thermochim. Acta. 273:1996;43-52.
115. Mancera R.L., Kronberg B., Costas M., Silveston R. Biophys. Chem. 70:1998;57-63.
116. Garde S., Hammer G., García A.E., Paulaitis M.E., Pratt L.R. Phys. Rev. Lett. 77:1996;4966-4968.
117. Hummer G., Garde S., García A.E., Paulaitis M.E., Pratt L.R. Proc. Natl. Acad. Sci. USA. 95:1998;1152-1555.
118. Hummer G., Garde S., García A.E., Paulaitis M.E., Pratt L.R. J. Phys. Chem. B. 102:1998;10469-10482.
119. Yang P.H., Rupley J.A. Biochemistry. 18:1979;2654-2661.
120. Gill S.J., Dec S.F., Olofsson G., Wadös I. J. Phys. Chem. 89:1985;3758-3761.
121. Graziano G., Barone G. J. Am. Chem. Soc. 118:1996;1831.
122. Sturtevant J.M. Proc. Natl. Acad. Sci. USA. 74:1977;2236-2240.
123. Privalov P.L., Makhatadze G.I. J. Mol. Biol. 224:1992;715-723.
124. Graziano G., Catanzano F., Vecchio P.D., Giancola C., Barone G. Gazz. Chim. Ital. 126:1996;559-567.
125. G.I. Makhatadze, P.L. Privalov, Biophys. Chem. 51 (1994) 291-6-309.
126. Creighton T.E. Curr. Opin. Struct. Biol. 1:1991;5-16.
127. Griko Y., Freire E., Privalov P.L. Biochemistry. 33:1994;1889-1899.
128. Xie D., Fox R., Freire E. Protein Sci. 3:1994;2175-2184.
129. Martinez J.C., Harrous M.E., Filimonov V.V., Mateo P.L., Fersht A.R. Biochemistry. 33:1994;3919-3926.
130. Pace C.N. CRC Crit. Rev. Biochem. 3:1975;1-43.
131. Allewell N.M., Oberoi H. Method Enzymol. 202:1991;3-19.
132. Lazaridis T., Archontis G., Karplus M. Adv. Protein Chem. 47:1995;231-306.
133. Ikai A. J. Biochem. 88:1980;1895-1895.
134. Stellwagen E., Wilgus H. Nature. 275:1978;342-343.
135. Silverstein K.A.T., Haymet A.D.J., Dill K.A. J. Am. Chem. Soc. 120:1998;3166-3175.