Atomic force microscopy of parallel DNA branched junction arrays

Chemistry and Biology

Volumn 7, Issue 9, 2000, Pages 743-751

  Sha, Ruojie ^a   Liu, Furong ^a   Millar, David P ^b   Seeman, Nadrian C ^a  

^a NEW YORK UNIVERSITY   (United States)

^b SCRIPPS RESEARCH INSTITUTE   (United States)

Author keywords

3,3' and 5',5' Nucleotide linkage; Atomic force microscopy; Branched DNA; DNA parallelogram array; Holliday junction structure

Indexed keywords

DNA;

ARTICLE; ATOMIC FORCE MICROSCOPY; CHEMICAL STRUCTURE; CHEMISTRY; COMPUTER PROGRAM; CONFORMATION; HYDROGEN BOND; METHODOLOGY; ULTRASTRUCTURE;

DNA; HYDROGEN BONDING; MICROSCOPY, ATOMIC FORCE; MODELS, MOLECULAR; NUCLEIC ACID CONFORMATION; SOFTWARE;

EID: 0033834654     PISSN: 10745521     EISSN: None     Source Type: Journal    
DOI: 10.1016/S1074-5521(00)00024-7     Document Type: Article

References (34)

1. A mechanism for gene conversion in fungi
2. Characterization of intermediates in site-specific recombination
3. Homology dependent interactions in phage lambda site-specific recombination
4. Site-specific recombination intermediates trapped with suicide substrates
5. DNA branch migration
6. The structure of the four-way junction in DNA
7. DNA branched junctions
8. Nucleic acid junctions and lattices
9. A Holliday recombination intermediate is twofold symmetric
10. Fluorescence energy transfer shows that the four-way DNA junction is a right-handed cross of antiparallel molecules
11. Interarm flexibility in a DNA four-way junction revealed by time-resolved fluorescence resonance energy transfer
12. Designed two-dimensional DNA Holliday junction arrays visualized by atomic force microscopy
13. Parallel helical domains in DNA branched junctions containing 5',5' and 3',3' linkages
14. Gel electrophoretic analysis of the geometry of a DNA four-way junction
15. Design and self-assembly of two-dimensional DNA crystals
16. Modifying the surface features of two-dimensional DNA crystals
17. The construction, analysis, ligation and self-assembly of DNA triple crossover molecules
18. Conformational isomers of Holliday junctions
19. DNA double crossover molecules
20. The stereo-chemistry of DNA four-way junctions, a theoretical study
21. Physical models for exploring DNA topology
22. Identification of double Holliday junctions as intermediates in meiotic recombination
23. DNA nanotechnology: Novel DNA constructions
24. The synthesis from DNA of a molecule with the connectivity of a cube
25. The construction of a DNA truncated octahedron
26. The design and Synthesis of a knot from single-stranded DNA
27. Assembly of Borromean rings from DNA
28. A DNA nano-mechanical device based on the B-Z transition
29. De novo design of sequences for nucleic acid structure engineering
30. Gene synthesis machines: DNA chemistry and its uses