메뉴 건너뛰기




Volumn 3, Issue 8, 2009, Pages 924-934

Salt marsh sediment bacteria: Their distribution and response to external nutrient inputs

Author keywords

Bacterial community composition; Denaturing gradient gel electrophoresis; Eutrophication; Salt marsh; Wetlands

Indexed keywords

BACTERIAL DNA; FERTILIZER; NITROGEN; PHOSPHORUS; RIBOSOME DNA; RNA 16S;

EID: 68649129020     PISSN: 17517362     EISSN: 17517370     Source Type: Journal    
DOI: 10.1038/ismej.2009.44     Document Type: Article
Times cited : (67)

References (43)
  • 2
    • 13844278172 scopus 로고    scopus 로고
    • Distribution of microbial communities associated with the dominant high marsh plants and sediments of the United States east coast
    • Blum LK, Roberts MS, Garland JL, Mills AL. (2004). Distribution of microbial communities associated with the dominant high marsh plants and sediments of the United States east coast. Microb Ecol 48: 375-388.
    • (2004) Microb Ecol , vol.48 , pp. 375-388
    • Blum, L.K.1    Roberts, M.S.2    Garland, J.L.3    Mills, A.L.4
  • 3
    • 66149091968 scopus 로고    scopus 로고
    • Increased supply of ambient nitrogen has minimal effect on salt marsh bacterial production
    • Bowen JL, Crump BC, Deegan LA, Hobbie JE. (2009). Increased supply of ambient nitrogen has minimal effect on salt marsh bacterial production. Limnol Oceanogr 54: 713-722.
    • (2009) Limnol Oceanogr , vol.54 , pp. 713-722
    • Bowen, J.L.1    Crump, B.C.2    Deegan, L.A.3    Hobbie, J.E.4
  • 4
    • 0042709560 scopus 로고    scopus 로고
    • Incorporation of radi-olabeled leucine into protein to estimate bacterial production in plant litter, sediment, epiphytic bio-films, and water samples
    • Buesing N, Gessner MO. (2003). Incorporation of radi-olabeled leucine into protein to estimate bacterial production in plant litter, sediment, epiphytic bio-films, and water samples. Microb Ecol 45: 291-301.
    • (2003) Microb Ecol , vol.45 , pp. 291-301
    • Buesing, N.1    Gessner, M.O.2
  • 5
    • 0034467820 scopus 로고    scopus 로고
    • Biogeography and degree of endemicity of fluorescent Pseudomonas strains in soil
    • Cho JC, Tiedje JM. (2000). Biogeography and degree of endemicity of fluorescent Pseudomonas strains in soil. Appl Environ Microbiol 66: 5448-5456.
    • (2000) Appl Environ Microbiol , vol.66 , pp. 5448-5456
    • Cho, J.C.1    Tiedje, J.M.2
  • 6
    • 32944475174 scopus 로고    scopus 로고
    • Microbial production, utilization, and enzymatic degradation of organic matter in the upper trophogenic layer in the pelagial zone of lakes along a eutrophication gradient
    • Chrost RJ, Siuda W. (2006). Microbial production, utilization, and enzymatic degradation of organic matter in the upper trophogenic layer in the pelagial zone of lakes along a eutrophication gradient. Limnol Oceanogr 51: 749-762.
    • (2006) Limnol Oceanogr , vol.51 , pp. 749-762
    • Chrost, R.J.1    Siuda, W.2
  • 7
    • 0027804103 scopus 로고
    • Non-parametric multivariate analysis of changes in community structure
    • Clarke KR. (1993). Non-parametric multivariate analysis of changes in community structure. Aust J Ecol 18: 117-143.
    • (1993) Aust J Ecol , vol.18 , pp. 117-143
    • Clarke, K.R.1
  • 10
    • 34547617665 scopus 로고    scopus 로고
    • Biogeography of bacterioplankton in lakes and streams of an arctic tundra catchment
    • Crump BC, Adams HE, Hobbie JE, Kling GW. (2007). Biogeography of bacterioplankton in lakes and streams of an arctic tundra catchment. Ecology 88: 1365-1478.
    • (2007) Ecology , vol.88 , pp. 1365-1478
    • Crump, B.C.1    Adams, H.E.2    Hobbie, J.E.3    Kling, G.W.4
  • 11
    • 28044457197 scopus 로고    scopus 로고
    • Synchrony and seasonality in bacterioplankton communities of two temperate rivers
    • Crump BC, Hobbie JE. (2005). Synchrony and seasonality in bacterioplankton communities of two temperate rivers. Limnol Oceanogr 50: 1718-1729.
    • (2005) Limnol Oceanogr , vol.50 , pp. 1718-1729
    • Crump, B.C.1    Hobbie, J.E.2
  • 12
    • 0242668350 scopus 로고    scopus 로고
    • Bacterioplankton community shifts in an arctic lake correlate with seasonal changes in organic matter source
    • Crump BC, Kling GW, Bahr M, Hobbie JE. (2003). Bacterioplankton community shifts in an arctic lake correlate with seasonal changes in organic matter source. Appl Environ Microbiol 69: 2253-2268.
    • (2003) Appl Environ Microbiol , vol.69 , pp. 2253-2268
    • Crump, B.C.1    Kling, G.W.2    Bahr, M.3    Hobbie, J.E.4
  • 15
    • 68649127135 scopus 로고    scopus 로고
    • Mid-Atlantic Integrated Assessment (MAIA)
    • EPA , Estuaries 1997-1998, U.S. Environmental Protection Agency. Office of Research and Development. National Health and Environmental Effects Research Laboratory, Atlantic Ecology Division. Narragansett, RI 02882. 115 pp
    • EPA (2002). Mid-Atlantic Integrated Assessment (MAIA) Estuaries 1997-1998. Summary Report. U.S. Environmental Protection Agency. Office of Research and Development. National Health and Environmental Effects Research Laboratory, Atlantic Ecology Division. Narragansett, RI 02882. 115 pp.
    • (2002) Summary Report
  • 16
    • 31444447130 scopus 로고    scopus 로고
    • The diversity and biogeography of soil bacterial communities
    • Fierer N, Jackson RB. (2006). The diversity and biogeography of soil bacterial communities. Proc Natl Acad Sci USA 103: 626-631.
    • (2006) Proc Natl Acad Sci USA , vol.103 , pp. 626-631
    • Fierer, N.1    Jackson, R.B.2
  • 17
    • 38449112550 scopus 로고    scopus 로고
    • Environmental controls on landscape-scale biogeography of stream bacterial communities
    • Fierer N, Morse JL, Berthrong ST, Bernhardt ES, Jackson RB. (2007). Environmental controls on landscape-scale biogeography of stream bacterial communities. Ecology 88: 2162-2173.
    • (2007) Ecology , vol.88 , pp. 2162-2173
    • Fierer, N.1    Morse, J.L.2    Berthrong, S.T.3    Bernhardt, E.S.4    Jackson, R.B.5
  • 18
    • 0036803124 scopus 로고    scopus 로고
    • A geostatistical analysis of small-scale spatial variability in bacterial abundance and community structure in salt marsh creek bank sediments
    • Franklin RB, Blum LK, McComb AC, Mills AL. (2002). A geostatistical analysis of small-scale spatial variability in bacterial abundance and community structure in salt marsh creek bank sediments. FEMS Microbiol Ecol 42: 71-80.
    • (2002) FEMS Microbiol Ecol , vol.42 , pp. 71-80
    • Franklin, R.B.1    Blum, L.K.2    McComb, A.C.3    Mills, A.L.4
  • 20
    • 33747174849 scopus 로고    scopus 로고
    • Spatial scaling of microbial biodiversity
    • Green J, Bohannan BJM. (2006). Spatial scaling of microbial biodiversity. Trends Ecol Evol 21: 501-507.
    • (2006) Trends Ecol Evol , vol.21 , pp. 501-507
    • Green, J.1    Bohannan, B.J.M.2
  • 21
    • 33947162416 scopus 로고    scopus 로고
    • Diversity and biogeography of bacterial assemblages in surface sediments across the San Pedro Basin, Southern California Borderlands
    • Hewson I, Jacobson/Meyers ME, Fuhrman JA. (2007). Diversity and biogeography of bacterial assemblages in surface sediments across the San Pedro Basin, Southern California Borderlands. Environ Microbiol 9: 923-933.
    • (2007) Environ Microbiol , vol.9 , pp. 923-933
    • Hewson, I.1    Jacobson2    Meyers, M.E.3    Fuhrman, J.A.4
  • 24
    • 64849102377 scopus 로고    scopus 로고
    • Weak response of saltmarsh infauna to ecosystem-wide nutrient enrichment and fish predator removal: A four year study
    • Johnson DS, Fleeger JW. (2009). Weak response of saltmarsh infauna to ecosystem-wide nutrient enrichment and fish predator removal: A four year study. J Exp Mar Biol Ecol 373: 35-44.
    • (2009) J Exp Mar Biol Ecol , vol.373 , pp. 35-44
    • Johnson, D.S.1    Fleeger, J.W.2
  • 25
    • 33749460423 scopus 로고    scopus 로고
    • Bacterioplankton community in Chesapeake Bay: Predictable or random assemblages
    • Kan J, Crump BC, Wang K, Chen F. (2007). Bacterioplankton community in Chesapeake Bay: predictable or random assemblages. Limnol Oceanogr 51: 2157-2169.
    • (2007) Limnol Oceanogr , vol.51 , pp. 2157-2169
    • Kan, J.1    Crump, B.C.2    Wang, K.3    Chen, F.4
  • 28
    • 84944814101 scopus 로고
    • Determination of chlorophyll and phaeo-pigments; spectrophotometric equations
    • Lorenzen GL. (1967). Determination of chlorophyll and phaeo-pigments; spectrophotometric equations. Limnol Oceanogr 12: 343-346.
    • (1967) Limnol Oceanogr , vol.12 , pp. 343-346
    • Lorenzen, G.L.1
  • 29
    • 19344365907 scopus 로고    scopus 로고
    • Effect of salinity and inorganic nitrogen concentrations on nitrification and denitrification rates in intertidal sediments and rocky biofilms of the Douro River estuary, Portugal
    • Magalhaes CM, Joye SB, Moreira RM, Wiebe WJ, Bordelo AA. (2005). Effect of salinity and inorganic nitrogen concentrations on nitrification and denitrification rates in intertidal sediments and rocky biofilms of the Douro River estuary, Portugal. Wat Res 39: 1783-1794.
    • (2005) Wat Res , vol.39 , pp. 1783-1794
    • Magalhaes, C.M.1    Joye, S.B.2    Moreira, R.M.3    Wiebe, W.J.4    Bordelo, A.A.5
  • 31
    • 35348933745 scopus 로고    scopus 로고
    • Multivariate analyses in microbial ecology
    • Ramette A. (2007). Multivariate analyses in microbial ecology. FEMS Microbiol Ecol 62: 142-160.
    • (2007) FEMS Microbiol Ecol , vol.62 , pp. 142-160
    • Ramette, A.1
  • 32
    • 33847318761 scopus 로고    scopus 로고
    • Multiscale responses of microbial life to spatial distance and environmental heterogeneity in a patchy ecosystem
    • Ramette A, Tiedje JM. (2007). Multiscale responses of microbial life to spatial distance and environmental heterogeneity in a patchy ecosystem. Proc Natl Acad Sci USA 104: 2761-2766.
    • (2007) Proc Natl Acad Sci USA , vol.104 , pp. 2761-2766
    • Ramette, A.1    Tiedje, J.M.2
  • 33
    • 13844315210 scopus 로고    scopus 로고
    • Ordination and significance testing of microbial community composition derived from terminal restriction fragment length polymorphisms: Application of multivariate statistics
    • Rees GN, Baldwin DS, Watson GO, Perryman S, Nielsen DL. (2004). Ordination and significance testing of microbial community composition derived from terminal restriction fragment length polymorphisms: application of multivariate statistics. Antonie van Leeuwenhoek 86: 339-347.
    • (2004) Antonie van Leeuwenhoek , vol.86 , pp. 339-347
    • Rees, G.N.1    Baldwin, D.S.2    Watson, G.O.3    Perryman, S.4    Nielsen, D.L.5
  • 34
    • 0030274238 scopus 로고    scopus 로고
    • Decadal shifts in a salt marsh macroinfaunal community in response to long-term experimental nutrient enrichment
    • Sarda R, Valiela I, Foreman K. (1996). Decadal shifts in a salt marsh macroinfaunal community in response to long-term experimental nutrient enrichment. J Exp Mar Biol Ecol 205: 63-81.
    • (1996) J Exp Mar Biol Ecol , vol.205 , pp. 63-81
    • Sarda, R.1    Valiela, I.2    Foreman, K.3
  • 35
    • 0037434691 scopus 로고    scopus 로고
    • Covariance of bacterioplankton composition and environmental variables in a temperate delta system
    • Stepanauskas R, Moran MA, Bergamaschi BA, Hollibaugh JT. (2003). Covariance of bacterioplankton composition and environmental variables in a temperate delta system. Aquat Microb Ecol 31: 85-98.
    • (2003) Aquat Microb Ecol , vol.31 , pp. 85-98
    • Stepanauskas, R.1    Moran, M.A.2    Bergamaschi, B.A.3    Hollibaugh, J.T.4
  • 36
    • 0002081065 scopus 로고    scopus 로고
    • Community structure and functional dynamics of benthic microalgae in salt marshes
    • Weinstein MP, Kreeger DA eds, Kluwer Academic Publishers: Dordrecht, The Netherlands, pp
    • Sullivan MJ, Currin CA. (2000). Community structure and functional dynamics of benthic microalgae in salt marshes. In: Weinstein MP, Kreeger DA (eds). Concepts and Controversies in Tidal Marsh Ecology. Kluwer Academic Publishers: Dordrecht, The Netherlands, pp 81-106.
    • (2000) Concepts and Controversies in Tidal Marsh Ecology , pp. 81-106
    • Sullivan, M.J.1    Currin, C.A.2
  • 37
    • 33750048742 scopus 로고    scopus 로고
    • Abundance and population structure of ammonia oxidizing bacteria that inhabit canal sediments receiving effluent from municipal wastewater treatment plants
    • Urakawa H, Maki H, Kawabata S, Fujimara T, Ando H, Kawai T et al. (2006). Abundance and population structure of ammonia oxidizing bacteria that inhabit canal sediments receiving effluent from municipal wastewater treatment plants. Appl Environ Microbiol 72: 6845-6850.
    • (2006) Appl Environ Microbiol , vol.72 , pp. 6845-6850
    • Urakawa, H.1    Maki, H.2    Kawabata, S.3    Fujimara, T.4    Ando, H.5    Kawai, T.6
  • 38
    • 0002961459 scopus 로고
    • Regulation of primary production in a salt marsh ecosystem
    • Gopal B, Turner RE, Wetzel RG, Whigham DF eds, International Scientific Publications: Jaipur, India, pp
    • Valiela I, Howes B, Howarth R, Gibin A, Foreman K, Teal JM et al. (1982). Regulation of primary production in a salt marsh ecosystem. In: Gopal B, Turner RE, Wetzel RG, Whigham DF (eds). Wetlands: Ecology and Management. International Scientific Publications: Jaipur, India, pp 152-168.
    • (1982) Wetlands: Ecology and Management , pp. 152-168
    • Valiela, I.1    Howes, B.2    Howarth, R.3    Gibin, A.4    Foreman, K.5    Teal, J.M.6
  • 39
    • 0002998989 scopus 로고
    • Nutrient limitation in salt marsh vegetation
    • Reimold RJ, Queen WH eds, Academic Press: New York, USA, pp
    • Valiela I, Teal J. (1974). Nutrient limitation in salt marsh vegetation. In: Reimold RJ, Queen WH (eds). Ecology of Halophytes. Academic Press: New York, USA, pp. 547-563.
    • (1974) Ecology of Halophytes , pp. 547-563
    • Valiela, I.1    Teal, J.2
  • 40
    • 0002247491 scopus 로고
    • Decomposition in salt marsh ecosystems: The phases and major factors affecting disappearance of above-ground organic matter
    • Valiela I, Teal JM, Allen SD, Van Etten R, Goehringer D, Volkmann S. (1985). Decomposition in salt marsh ecosystems: the phases and major factors affecting disappearance of above-ground organic matter. J Exp Mar Biol Ecol 89: 29-54.
    • (1985) J Exp Mar Biol Ecol , vol.89 , pp. 29-54
    • Valiela, I.1    Teal, J.M.2    Allen, S.D.3    Van Etten, R.4    Goehringer, D.5    Volkmann, S.6
  • 41
    • 0011333094 scopus 로고
    • Inhibition of nitrogen fixation in salt marshes measured by acetylene reduction
    • Van Raalte CD, Valiela I, Carpenter EJ, Teal JM. (1974). Inhibition of nitrogen fixation in salt marshes measured by acetylene reduction. Estuar Coast Mar Sci 2: 301-305.
    • (1974) Estuar Coast Mar Sci , vol.2 , pp. 301-305
    • Van Raalte, C.D.1    Valiela, I.2    Carpenter, E.J.3    Teal, J.M.4
  • 42
    • 84986734314 scopus 로고
    • Production of epibenthic algae: Light and nutrient limitation
    • Van Raalte CD, Valiela I, Teal JM. (1976). Production of epibenthic algae: light and nutrient limitation. Limnol Oceanogr 21: 862-872.
    • (1976) Limnol Oceanogr , vol.21 , pp. 862-872
    • Van Raalte, C.D.1    Valiela, I.2    Teal, J.M.3
  • 43
    • 33745070555 scopus 로고    scopus 로고
    • Taxa-area relationships for microbes: The unsampled and the unseen
    • Woodcock S, Curtis TP, Head IM, Lunn KM, Sloan WT. (2006). Taxa-area relationships for microbes: the unsampled and the unseen. Ecol Lett 9: 805-812.
    • (2006) Ecol Lett , vol.9 , pp. 805-812
    • Woodcock, S.1    Curtis, T.P.2    Head, I.M.3    Lunn, K.M.4    Sloan, W.T.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.