메뉴 건너뛰기




Volumn 6, Issue 2, 2009, Pages

Work distribution in manipulated single biomolecules

Author keywords

[No Author keywords available]

Indexed keywords

POLYPEPTIDE; PROTEIN;

EID: 68349139439     PISSN: 14783967     EISSN: 14783975     Source Type: Journal    
DOI: 10.1088/1478-3975/6/2/025011     Document Type: Article
Times cited : (5)

References (34)
  • 1
    • 0031002460 scopus 로고    scopus 로고
    • Folding-unfolding transitions in single titin molecules characterized with laser tweezers
    • Kellermayer M S, Smith S B, Granzier H L and Bustamante C 1997 Folding-unfolding transitions in single titin molecules characterized with laser tweezers Science 276 1112
    • (1997) Science , vol.276 , pp. 1112
    • Kellermayer, M.S.1    Smith, S.B.2    Granzier, H.L.3    Bustamante, C.4
  • 2
    • 0033616713 scopus 로고    scopus 로고
    • Mechanical and chemical unfolding of a single protein: A comparison
    • Carrion-Vasquez M et al 1999 Mechanical and chemical unfolding of a single protein: a comparison Proc. Natl Acad. Sci. 96 3694
    • (1999) Proc. Natl Acad. Sci. , vol.96 , pp. 3694
    • Carrion-Vasquez, M.1    Al, E.2
  • 3
    • 0042508740 scopus 로고    scopus 로고
    • The mechanical stability of ubiquitin is linkage dependent
    • Carrion-Vasquez M et al 2003 The mechanical stability of ubiquitin is linkage dependent Nat. Struct. Biol. 10 738
    • (2003) Nat. Struct. Biol. , vol.10 , pp. 738
    • Carrion-Vasquez, M.1
  • 4
    • 9244234443 scopus 로고    scopus 로고
    • Exploring the energy landscape of GFP by single-molecule mechanical experiments
    • Dietz H and Rief M 2004 Exploring the energy landscape of GFP by single-molecule mechanical experiments Proc. Natl Acad. Sci. 101 16192
    • (2004) Proc. Natl Acad. Sci. , vol.101 , pp. 16192
    • Dietz, H.1    Rief, M.2
  • 5
  • 7
    • 0034612346 scopus 로고    scopus 로고
    • Atomic force microscopy reveals the mechanical design of a modular protein
    • Li H et al 2000 Atomic force microscopy reveals the mechanical design of a modular protein Proc. Natl Acad. Sci. 97 6527
    • (2000) Proc. Natl Acad. Sci. , vol.97 , pp. 6527
    • Li, H.1    Al, E.2
  • 8
    • 1542513548 scopus 로고    scopus 로고
    • Force-clamp spectroscopy monitors the folding trajectory of a single protein
    • Fernandez J M and Li H 2004 Force-clamp spectroscopy monitors the folding trajectory of a single protein Science 303 1674
    • (2004) Science , vol.303 , pp. 1674
    • Fernandez, J.M.1    Li, H.2
  • 9
    • 2442448427 scopus 로고    scopus 로고
    • The unfolding kinetics of ubiquitin captured with single-molecule force-clamp techniques
    • Schlierf M, Li H and Fernandez J M 2004 The unfolding kinetics of ubiquitin captured with single-molecule force-clamp techniques Proc. Natl Acad. Sci. 101 7299
    • (2004) Proc. Natl Acad. Sci. , vol.101 , pp. 7299
    • Schlierf, M.1    Li, H.2    Fernandez, J.M.3
  • 10
    • 0037452772 scopus 로고    scopus 로고
    • DNA unzipped under a constant force exhibits multiple metastable intermediates
    • Danilowicz C et al 2003 DNA unzipped under a constant force exhibits multiple metastable intermediates Proc. Natl Acad. Sci. 100 1694
    • (2003) Proc. Natl Acad. Sci. , vol.100 , pp. 1694
    • Danilowicz, C.1    Al, E.2
  • 11
    • 0035957720 scopus 로고    scopus 로고
    • Reversible unfolding of single RNA molecules by mechanical force
    • Liphardt J et al 2001 Reversible unfolding of single RNA molecules by mechanical force Science 292 733
    • (2001) Science , vol.292 , pp. 733
    • Liphardt, J.1    Al, E.2
  • 12
    • 0242417558 scopus 로고    scopus 로고
    • Identifying kinetic barriers to mechanical unfolding of the T. thermophila ribozyme
    • Onoa B et al 2003 Identifying kinetic barriers to mechanical unfolding of the T. thermophila ribozyme Science 299 1892
    • (2003) Science , vol.299 , pp. 1892
    • Onoa, B.1    Al, E.2
  • 13
    • 0037036070 scopus 로고    scopus 로고
    • Equilibrium information from nonequilibrium measurements in an experimental test of Jarzynski's equality
    • Liphardt J, Dumont S, Smith S, Tinoco I and Bustamante C 2002 Equilibrium information from nonequilibrium measurements in an experimental test of Jarzynski's equality Science 296 1832
    • (2002) Science , vol.296 , pp. 1832
    • Liphardt, J.1    Dumont, S.2    Smith, S.3    Tinoco, I.4    Bustamante, C.5
  • 14
    • 24644450199 scopus 로고    scopus 로고
    • Verification of the Crooks fluctuation theorem and recovery of RNA folding free energies
    • Collin D, Ritort F, Jarzynski C, Smith S B, Tinoco Jr I and Bustamante C 2005 Verification of the Crooks fluctuation theorem and recovery of RNA folding free energies Nature 437 231
    • (2005) Nature , vol.437 , pp. 231
    • Collin, D.1    Ritort, F.2    Jarzynski, C.3    Smith, S.B.4    Tinoco, I.5    Bustamante, C.6
  • 15
    • 4243754128 scopus 로고    scopus 로고
    • Nonequilibrium equality for free energy differences
    • Jarzynski C 1997 Nonequilibrium equality for free energy differences Phys. Rev. Lett. 78 2690
    • (1997) Phys. Rev. Lett. , vol.78 , pp. 2690
    • Jarzynski, C.1
  • 16
    • 4244116139 scopus 로고    scopus 로고
    • Equilibrium free-energy differences from nonequilibrium measurements: A master-equation approach
    • Jarzynski C 1997 Equilibrium free-energy differences from nonequilibrium measurements: a master-equation approach Phys. Rev. E 56 5018
    • (1997) Phys. Rev. , vol.56 , pp. 5018
    • Jarzynski, C.1
  • 17
    • 0032023968 scopus 로고    scopus 로고
    • Nonequilibrium measurements of free energy differences for microscopically reversible Markovian systems
    • Crooks G E 1998 Nonequilibrium measurements of free energy differences for microscopically reversible Markovian systems J. Stat. Phys. 90 1481
    • (1998) J. Stat. Phys. , vol.90 , pp. 1481
    • Crooks, G.E.1
  • 18
    • 0000765761 scopus 로고    scopus 로고
    • Entropy production fluctuation theorem and the nonequilibrium work relation for free energy differences
    • Crooks G E 1999 Entropy production fluctuation theorem and the nonequilibrium work relation for free energy differences Phys. Rev. E 60 2721
    • (1999) Phys. Rev. , vol.60 , pp. 2721
    • Crooks, G.E.1
  • 19
    • 0035957434 scopus 로고    scopus 로고
    • Free energy reconstruction from nonequilibrium single-molecule pulling experiments
    • Hummer G and Szabo A 2001 Free energy reconstruction from nonequilibrium single-molecule pulling experiments Proc. Natl Acad. Sci. 98 3658
    • (2001) Proc. Natl Acad. Sci. , vol.98 , pp. 3658
    • Hummer, G.1    Szabo, A.2
  • 20
    • 39649125421 scopus 로고    scopus 로고
    • Nonequilibrium fluctuations in small systems: From physics to biology
    • Ritort F 2008 Nonequilibrium fluctuations in small systems: from physics to biology Adv. Chem. Phys. 137 31
    • (2008) Adv. Chem. Phys. , vol.137 , pp. 31
    • Ritort, F.1
  • 21
    • 34547726774 scopus 로고    scopus 로고
    • Experimental free energy surface reconstruction from single-molecule force spectroscopy using Jarzynski's equality
    • Harris N C, Song Y and Kiang C-H 2007 Experimental free energy surface reconstruction from single-molecule force spectroscopy using Jarzynski's equality Phys. Rev. Lett. 99 068101
    • (2007) Phys. Rev. Lett. , vol.99 , pp. 068101
    • Harris, N.C.1    Song, Y.2    Kiang, C.-H.3
  • 22
    • 78951496069 scopus 로고    scopus 로고
    • Reconstructing the free-energy landscape of a polyprotein by single-molecule experiments
    • Imparato A, Sbrana F and Vassalli M 2008 Reconstructing the free-energy landscape of a polyprotein by single-molecule experiments Europhys. Lett. 82 58006
    • (2008) Europhys. Lett. , vol.82 , pp. 58006
    • Imparato, A.1    Sbrana, F.2    Vassalli, M.3
  • 23
    • 20744445985 scopus 로고    scopus 로고
    • Work distribution and path integrals in general mean-field systems
    • Imparato A and Peliti L 2005 Work distribution and path integrals in general mean-field systems Europhys. Lett. 70 740
    • (2005) Europhys. Lett. , vol.70 , pp. 740
    • Imparato, A.1    Peliti, L.2
  • 24
    • 33244482631 scopus 로고    scopus 로고
    • Work-probability distribution in systems driven out of equilibrium
    • Imparato A and Peliti L 2005 Work-probability distribution in systems driven out of equilibrium Phys. Rev. E 72 046114
    • (2005) Phys. Rev. , vol.72 , pp. 046114
    • Imparato, A.1    Peliti, L.2
  • 25
    • 19644401497 scopus 로고    scopus 로고
    • Probing molecular free energy landscapes by periodic loading
    • Braun O, Hanke A and Seifert U 2004 Probing molecular free energy landscapes by periodic loading Phys. Rev. Lett. 93 158105
    • (2004) Phys. Rev. Lett. , vol.93 , pp. 158105
    • Braun, O.1    Hanke, A.2    Seifert, U.3
  • 26
    • 0038650860 scopus 로고    scopus 로고
    • Kinetics from nonequilibrium single-molecule pulling experiments
    • Hummer G and Szabo A 2003 Kinetics from nonequilibrium single-molecule pulling experiments Biophys. J. 85 5
    • (2003) Biophys. J. , vol.85 , pp. 5
    • Hummer, G.1    Szabo, A.2
  • 27
    • 33645004171 scopus 로고    scopus 로고
    • Intrinsic rates and activation free energies from single-molecule pulling experiments
    • Dudko O K, Hummer G and Szabo A 2006 Intrinsic rates and activation free energies from single-molecule pulling experiments Phys. Rev. Lett. 96 108101
    • (2006) Phys. Rev. Lett. , vol.96 , pp. 108101
    • Dudko, O.K.1    Hummer, G.2    Szabo, A.3
  • 28
    • 44949087478 scopus 로고    scopus 로고
    • On the work-Hamiltonian connection in manipulated systems
    • Peliti L 2008 On the work-Hamiltonian connection in manipulated systems J. Stat. Mech. P05002
    • (2008) J. Stat. Mech. , vol.2008 , pp. 05002
    • Peliti, L.1
  • 29
    • 14544274980 scopus 로고    scopus 로고
    • Work probability distribution in single-molecule experiments
    • Imparato A and Peliti L 2005 Work probability distribution in single-molecule experiments Europhys. Lett. 69 643
    • (2005) Europhys. Lett. , vol.69 , pp. 643
    • Imparato, A.1    Peliti, L.2
  • 30
    • 0000514837 scopus 로고
    • Transport, collective motion, and Brownian motion
    • Mori H 1965 Transport, collective motion, and Brownian motion Prog. Theor. Phys. 33 423
    • (1965) Prog. Theor. Phys. , vol.33 , pp. 423
    • Mori, H.1
  • 31
    • 34147147538 scopus 로고    scopus 로고
    • Ising-like model for protein mechanical unfolding
    • Imparato A, Pelizzola A and Zamparo M 2007 Ising-like model for protein mechanical unfolding Phys. Rev. Lett. 98 148102
    • (2007) Phys. Rev. Lett. , vol.98 , pp. 148102
    • Imparato, A.1    Pelizzola, A.2    Zamparo, M.3
  • 32
    • 35248849406 scopus 로고    scopus 로고
    • Protein mechanical unfolding: A model with binary variables
    • Imparato A, Pelizzola A and Zamparo M 2007 Protein mechanical unfolding: a model with binary variables J. Chem. Phys. 127 145105
    • (2007) J. Chem. Phys. , vol.127 , pp. 145105
    • Imparato, A.1    Pelizzola, A.2    Zamparo, M.3
  • 33
    • 42449140300 scopus 로고    scopus 로고
    • Mechanical unfolding and refolding pathways of ubiquitin
    • Imparato A and Pelizzola A 2008 Mechanical unfolding and refolding pathways of ubiquitin Phys. Rev. Lett. 100 158104
    • (2008) Phys. Rev. Lett. , vol.100 , pp. 158104
    • Imparato, A.1    Pelizzola, A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.