메뉴 건너뛰기




Volumn 22, Issue 2, 2009, Pages 393-400

Small polydispersed circular DNA contains strains of mobile genetic elements and occurs more frequently in permanent cell lines of malignant tumors than in normal lymphocytes

Author keywords

Alu; LINE 1; spcDNA; Telomeric sequences

Indexed keywords

CELL DNA; CIRCULAR DNA;

EID: 68349089343     PISSN: 1021335X     EISSN: 17912431     Source Type: Journal    
DOI: 10.3892/or_00000450     Document Type: Article
Times cited : (17)

References (46)
  • 1
    • 0030898526 scopus 로고    scopus 로고
    • Small polydispersed circular DNA (spcDNA) in human cells: Association with genomic instability
    • Cohen S, Regev A and Lavi S: Small polydispersed circular DNA (spcDNA) in human cells: association with genomic instability. Oncogene 14: 977-985, 1997.
    • (1997) Oncogene , vol.14 , pp. 977-985
    • Cohen, S.1    Regev, A.2    Lavi, S.3
  • 2
    • 0025672711 scopus 로고
    • Extrachromosomal circular DNAs and genomic sequence plasticity in eukaryotic cells
    • Gaubatz JW: Extrachromosomal circular DNAs and genomic sequence plasticity in eukaryotic cells. Mutat Res 237: 271-292, 1990.
    • (1990) Mutat Res , vol.237 , pp. 271-292
    • Gaubatz, J.W.1
  • 3
    • 0027397586 scopus 로고
    • Increased amount and contour length distribution of small polydisperse circular DNA (spcDNA) in Fanconi anemia
    • Motejlek K, Schindler D, Assum G and Krone W: Increased amount and contour length distribution of small polydisperse circular DNA (spcDNA) in Fanconi anemia. Mutat Res 293: 205-214, 1993.
    • (1993) Mutat Res , vol.293 , pp. 205-214
    • Motejlek, K.1    Schindler, D.2    Assum, G.3    Krone, W.4
  • 4
    • 0032585645 scopus 로고    scopus 로고
    • Telomeric repeats on small polydisperse circular DNA (spcDNA) and genomic instability
    • Regev A, Cohen S, Cohen E, Bar-Am I and Lavi S: Telomeric repeats on small polydisperse circular DNA (spcDNA) and genomic instability. Oncogene 17: 3455-3461, 1998.
    • (1998) Oncogene , vol.17 , pp. 3455-3461
    • Regev, A.1    Cohen, S.2    Cohen, E.3    Bar-Am, I.4    Lavi, S.5
  • 6
    • 0032824151 scopus 로고    scopus 로고
    • Regulated formation of extrachromosomal circular DNA molecules during development in Xenopus laevis
    • Cohen S, Menut S and Mechali M: Regulated formation of extrachromosomal circular DNA molecules during development in Xenopus laevis. Mol Cell Biol 19: 6682-6689, 1999.
    • (1999) Mol Cell Biol , vol.19 , pp. 6682-6689
    • Cohen, S.1    Menut, S.2    Mechali, M.3
  • 7
    • 0036960825 scopus 로고    scopus 로고
    • Formation of extrachromosomal circles from telomeric DNA in Xenopus laevis
    • Cohen S and Mechali M: Formation of extrachromosomal circles from telomeric DNA in Xenopus laevis. EMBO Rep 3: 1168-1174, 2002.
    • (2002) EMBO Rep , vol.3 , pp. 1168-1174
    • Cohen, S.1    Mechali, M.2
  • 8
    • 33746827680 scopus 로고    scopus 로고
    • Mouse major satellite DNA is prone to eccDNA formation via DNA ligase IV-dependent pathway
    • Cohen Z, Bacharach E and Lavi S: Mouse major satellite DNA is prone to eccDNA formation via DNA ligase IV-dependent pathway. Oncogene 25: 4515-4524, 2006.
    • (2006) Oncogene , vol.25 , pp. 4515-4524
    • Cohen, Z.1    Bacharach, E.2    Lavi, S.3
  • 9
    • 40549104792 scopus 로고    scopus 로고
    • Extrachromosomal circular DNA derived from tandemly repeated genomic sequences in plants
    • Cohen S, Houben A and Segal D: Extrachromosomal circular DNA derived from tandemly repeated genomic sequences in plants. Plant J 53: 1027-1034, 2008.
    • (2008) Plant J , vol.53 , pp. 1027-1034
    • Cohen, S.1    Houben, A.2    Segal, D.3
  • 12
    • 0004136246 scopus 로고
    • Sambrook J, Fritsch EF and Maniatis T eds, 2nd edition. Cold Spring Harbor Laboratory, Cold Spring Harbor, New York
    • Sambrook J, Fritsch EF and Maniatis T (eds): Molecular cloning: a laboratory manual. 2nd edition. Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, 1989.
    • (1989) Molecular cloning: A laboratory manual
  • 13
    • 0023646792 scopus 로고
    • The localization of replication origins on ARS plasmids in S. cerevisiae
    • Brewer BJ and Fangman WL: The localization of replication origins on ARS plasmids in S. cerevisiae. Cell 51: 463-471, 1987.
    • (1987) Cell , vol.51 , pp. 463-471
    • Brewer, B.J.1    Fangman, W.L.2
  • 14
    • 0242329885 scopus 로고    scopus 로고
    • Human Alu element retrotransposition induced by genotoxic stress
    • Hagan CR, Sheffield RF and Rudim CM: Human Alu element retrotransposition induced by genotoxic stress. Nat Genet 35: 219-220, 2003.
    • (2003) Nat Genet , vol.35 , pp. 219-220
    • Hagan, C.R.1    Sheffield, R.F.2    Rudim, C.M.3
  • 15
    • 0029924018 scopus 로고    scopus 로고
    • Induction of circles of heterogenous sizes in carcinogen-treated cells: Two-dimensional gel analysis of circular DNA molecules
    • Cohen S and Lavi S: Induction of circles of heterogenous sizes in carcinogen-treated cells: two-dimensional gel analysis of circular DNA molecules. Mol Cell Biol 16: 2002-2014, 1996.
    • (1996) Mol Cell Biol , vol.16 , pp. 2002-2014
    • Cohen, S.1    Lavi, S.2
  • 16
    • 0035875136 scopus 로고    scopus 로고
    • A novel cell-free system reveals a mechanism of circular DNA formation from tandem repeats
    • Cohen S and Mechali M: A novel cell-free system reveals a mechanism of circular DNA formation from tandem repeats. Nucleic Acid Res 29: 2542-2548, 2001.
    • (2001) Nucleic Acid Res , vol.29 , pp. 2542-2548
    • Cohen, S.1    Mechali, M.2
  • 17
    • 0021988114 scopus 로고
    • Appearance of extrachromosomal circular DNAs during in vivo and in vitro ageing of mammalian cells
    • Kunisada T, Yamagishi H, Ogita Z, Kirakawa T and Mitsui Y: Appearance of extrachromosomal circular DNAs during in vivo and in vitro ageing of mammalian cells. Mech Ageing Dev 29: 89-99, 1985.
    • (1985) Mech Ageing Dev , vol.29 , pp. 89-99
    • Kunisada, T.1    Yamagishi, H.2    Ogita, Z.3    Kirakawa, T.4    Mitsui, Y.5
  • 18
    • 0021895423 scopus 로고
    • Amplification of extrachromosomal small circular DNAs in a murine model of accelerated senescence. A brief note
    • Yamagishi H, Kunisada T and Takeda T: Amplification of extrachromosomal small circular DNAs in a murine model of accelerated senescence. A brief note. Mech Ageing Dev 29: 101-103, 1985.
    • (1985) Mech Ageing Dev , vol.29 , pp. 101-103
    • Yamagishi, H.1    Kunisada, T.2    Takeda, T.3
  • 19
    • 0038817792 scopus 로고    scopus 로고
    • Extrachromosomal circular DNA of tandemly repeated genomic sequences in Drosophila
    • Cohen S, Yacobi K and Segal D: Extrachromosomal circular DNA of tandemly repeated genomic sequences in Drosophila. Genome Res 13: 1133-1145, 2003.
    • (2003) Genome Res , vol.13 , pp. 1133-1145
    • Cohen, S.1    Yacobi, K.2    Segal, D.3
  • 20
    • 0024344752 scopus 로고
    • Hamster line and Alu-equivalent sequences are present in the small polydispersed circular DNA population of CHO cells
    • Miles C and Meuth M: Hamster line and Alu-equivalent sequences are present in the small polydispersed circular DNA population of CHO cells. Nucleic Acids Res 17: 5846, 1989.
    • (1989) Nucleic Acids Res , vol.17 , pp. 5846
    • Miles, C.1    Meuth, M.2
  • 21
    • 0021839394 scopus 로고
    • Transposon-like sequences in extrachromosomal circular DNA from mouse thymocytes
    • Fujimoto S, Tsuda T, Toda M and Yamagishi H: Transposon-like sequences in extrachromosomal circular DNA from mouse thymocytes. Proc Natl Acad Sci USA 82: 2072-2076, 1985.
    • (1985) Proc Natl Acad Sci USA , vol.82 , pp. 2072-2076
    • Fujimoto, S.1    Tsuda, T.2    Toda, M.3    Yamagishi, H.4
  • 22
    • 0023056204 scopus 로고
    • Molecular cloning and characterization of small polydisperse circular DNA from mouse 3T6 cells
    • Sunnerhagen P, Sjöberg RM, Karlsson AL, Lundh L and Bjursell G: Molecular cloning and characterization of small polydisperse circular DNA from mouse 3T6 cells. Nucleic Acids Res 14: 7823-7838, 1986.
    • (1986) Nucleic Acids Res , vol.14 , pp. 7823-7838
    • Sunnerhagen, P.1    Sjöberg, R.M.2    Karlsson, A.L.3    Lundh, L.4    Bjursell, G.5
  • 23
    • 0024510904 scopus 로고
    • Increase of extra-chromosomal circular DNA in mouse 3T6 cells on perturbation of DNA synthesis: Implications for gene amplification
    • Sunnerhagen P, Sjöberg RM and Bjursell G: Increase of extra-chromosomal circular DNA in mouse 3T6 cells on perturbation of DNA synthesis: implications for gene amplification. Somat Cell Mol Genet 15: 61-70, 1989.
    • (1989) Somat Cell Mol Genet , vol.15 , pp. 61-70
    • Sunnerhagen, P.1    Sjöberg, R.M.2    Bjursell, G.3
  • 24
    • 0024284281 scopus 로고
    • Characterization of repetitive sequence families in mouse heart small polydisperse circular DNAs: Age-related studies
    • Flores SC, Sunnerhagen P, Moore TK and Gaubatz JW: Characterization of repetitive sequence families in mouse heart small polydisperse circular DNAs: age-related studies. Nucleic Acids Res 16: 3889-3906, 1988.
    • (1988) Nucleic Acids Res , vol.16 , pp. 3889-3906
    • Flores, S.C.1    Sunnerhagen, P.2    Moore, T.K.3    Gaubatz, J.W.4
  • 25
    • 0025319762 scopus 로고
    • Tissue-specific and age-related variations in repetitive sequences of mouse extrachromosomal circular DNAs
    • Gaubatz JW and Flores SC: Tissue-specific and age-related variations in repetitive sequences of mouse extrachromosomal circular DNAs. Mutat Res 237: 29-36, 1990.
    • (1990) Mutat Res , vol.237 , pp. 29-36
    • Gaubatz, J.W.1    Flores, S.C.2
  • 26
    • 0020492234 scopus 로고
    • Molecular characterization of small polydisperse circular deoxyribonucleic acid from an African green monkey cell line
    • Bertelsen AH, Humayun MZ, Karfopoulos SG and Rush MG: Molecular characterization of small polydisperse circular deoxyribonucleic acid from an African green monkey cell line. Biochemistry 21: 2076-2085, 1982.
    • (1982) Biochemistry , vol.21 , pp. 2076-2085
    • Bertelsen, A.H.1    Humayun, M.Z.2    Karfopoulos, S.G.3    Rush, M.G.4
  • 27
    • 0021646053 scopus 로고
    • Structure of extrachromosomal circular DNAs containing both the Alu family of dispersed repetitive sequences and other regions of chromosomal DNA
    • Krolewski JJ, Schindler CW and Rush MG: Structure of extrachromosomal circular DNAs containing both the Alu family of dispersed repetitive sequences and other regions of chromosomal DNA. J Mol Biol 174: 41-54, 1984.
    • (1984) J Mol Biol , vol.174 , pp. 41-54
    • Krolewski, J.J.1    Schindler, C.W.2    Rush, M.G.3
  • 28
    • 0022432544 scopus 로고
    • Discrete size classes of monkey extrachromosomal circular DNA containing the L1 family of long interspersed nucleotide sequences are produced by a general non-sequence specific mechanism
    • Schindler CW and Rush MG: Discrete size classes of monkey extrachromosomal circular DNA containing the L1 family of long interspersed nucleotide sequences are produced by a general non-sequence specific mechanism. Nucleic Acids Res 13: 8247-8258, 1985.
    • (1985) Nucleic Acids Res , vol.13 , pp. 8247-8258
    • Schindler, C.W.1    Rush, M.G.2
  • 29
    • 0022424130 scopus 로고
    • Interspersed repetitive and tandemly repetitive sequences are differentially represented in extrachromosomal covalently closed circular DNA of human diploid fibroblasts
    • Riabowol K, Shmookler Reis RJ and Goldstein S: Interspersed repetitive and tandemly repetitive sequences are differentially represented in extrachromosomal covalently closed circular DNA of human diploid fibroblasts. Nucleic Acids Res 13: 5563-5584, 1985.
    • (1985) Nucleic Acids Res , vol.13 , pp. 5563-5584
    • Riabowol, K.1    Shmookler Reis, R.J.2    Goldstein, S.3
  • 30
    • 0021721366 scopus 로고
    • Sequence repetition and genomic distribution of small polydisperse circular DNA purified from HeLa cells
    • Kunisada T and Yamagishi H: Sequence repetition and genomic distribution of small polydisperse circular DNA purified from HeLa cells. Gene 31: 213-223, 1984.
    • (1984) Gene , vol.31 , pp. 213-223
    • Kunisada, T.1    Yamagishi, H.2
  • 31
    • 0023597982 scopus 로고
    • Sequence organization of repetitive sequences enriched in small polydisperse circular DNAs from HeLa cells
    • Kunisada T and Yamagishi H: Sequence organization of repetitive sequences enriched in small polydisperse circular DNAs from HeLa cells. J Mol Biol 198: 557-565, 1987.
    • (1987) J Mol Biol , vol.198 , pp. 557-565
    • Kunisada, T.1    Yamagishi, H.2
  • 32
    • 0022423126 scopus 로고
    • Characterization of cloned human alphoid satellite with an unusual monomeric construction: Evidence for enrichment in HeLa small polydisperse circular DNA
    • Jones RS and Potter SS: Characterization of cloned human alphoid satellite with an unusual monomeric construction: evidence for enrichment in HeLa small polydisperse circular DNA. Nucleic Acids Res 13: 1027-1042, 1985.
    • (1985) Nucleic Acids Res , vol.13 , pp. 1027-1042
    • Jones, R.S.1    Potter, S.S.2
  • 33
    • 0037047398 scopus 로고    scopus 로고
    • LINE drive. Retrotransposition and genome instability
    • Kazazian HH Jr and Goodier JL: LINE drive. Retrotransposition and genome instability. Cell 110: 277-280, 2002.
    • (2002) Cell , vol.110 , pp. 277-280
    • Kazazian Jr, H.H.1    Goodier, J.L.2
  • 34
    • 30344488422 scopus 로고    scopus 로고
    • Transposable elements - is there a link between evolution and cancer?
    • Hauptmann S and Schmitt WD: Transposable elements - is there a link between evolution and cancer? Med Hypotheses 66: 580-591, 2006.
    • (2006) Med Hypotheses , vol.66 , pp. 580-591
    • Hauptmann, S.1    Schmitt, W.D.2
  • 35
    • 0021815877 scopus 로고
    • Identification of autonomously replicating circular subtelomeric Y' elements in Saccharomyces cerevisiae
    • Horowitz H and Haber JE: Identification of autonomously replicating circular subtelomeric Y' elements in Saccharomyces cerevisiae. Mol Cell Biol 5: 2369-2380, 1985.
    • (1985) Mol Cell Biol , vol.5 , pp. 2369-2380
    • Horowitz, H.1    Haber, J.E.2
  • 36
    • 2542475036 scopus 로고    scopus 로고
    • Alternatives to telomerase: Keeping linear chromosomes via telomeric circles
    • Tomaska L, McEachern MJ and Nosek J: Alternatives to telomerase: keeping linear chromosomes via telomeric circles. FEBS Lett 567: 142-146, 2004.
    • (2004) FEBS Lett , vol.567 , pp. 142-146
    • Tomaska, L.1    McEachern, M.J.2    Nosek, J.3
  • 37
    • 33745744815 scopus 로고    scopus 로고
    • Telomerase- and capping-independent yeast survivors with alternate telomere status
    • Larrivee M and Wellinger RJ: Telomerase- and capping-independent yeast survivors with alternate telomere status. Nat Cell Biol 8: 741-747, 2006.
    • (2006) Nat Cell Biol , vol.8 , pp. 741-747
    • Larrivee, M.1    Wellinger, R.J.2
  • 38
    • 0034633692 scopus 로고    scopus 로고
    • Telomere fusions caused by mutating the terminal region of telomeric DNA
    • McEachern MJ, Iyer S, Fulton TB and Blackburn EH: Telomere fusions caused by mutating the terminal region of telomeric DNA. Proc Natl Acad Sci USA 97: 11409-11414, 2000.
    • (2000) Proc Natl Acad Sci USA , vol.97 , pp. 11409-11414
    • McEachern, M.J.1    Iyer, S.2    Fulton, T.B.3    Blackburn, E.H.4
  • 41
    • 34250011694 scopus 로고    scopus 로고
    • Telomere maintenance in sarcomas
    • Johnson JE and Broccoli D: Telomere maintenance in sarcomas. Curr Opin Oncol 19: 377-382, 2007.
    • (2007) Curr Opin Oncol , vol.19 , pp. 377-382
    • Johnson, J.E.1    Broccoli, D.2
  • 42
    • 33847726179 scopus 로고    scopus 로고
    • Xrcc3 and Nbs1 are required for the production of extrachromosomal telomeric circles in human alternative lengthening of telomere cells
    • Compton SA, Choi JH, Cesare AJ, Ozgür S and Griffith JD: Xrcc3 and Nbs1 are required for the production of extrachromosomal telomeric circles in human alternative lengthening of telomere cells. Cancer Res 67: 1513-1519, 2007.
    • (2007) Cancer Res , vol.67 , pp. 1513-1519
    • Compton, S.A.1    Choi, J.H.2    Cesare, A.J.3    Ozgür, S.4    Griffith, J.D.5
  • 43
    • 0037063361 scopus 로고    scopus 로고
    • Telomere maintenance in telomerase-positive human ovarian SKOV-3 cells cannot be retarded by complete inhibition of telomerase
    • Gan Y, Mo Y, Johnston J, Lu J, Wientjes MG and Au JL-S: Telomere maintenance in telomerase-positive human ovarian SKOV-3 cells cannot be retarded by complete inhibition of telomerase. FEBS Lett 527: 10-14, 2002.
    • (2002) FEBS Lett , vol.527 , pp. 10-14
    • Gan, Y.1    Mo, Y.2    Johnston, J.3    Lu, J.4    Wientjes, M.G.5    Au, J.L.-S.6
  • 45
    • 33846026008 scopus 로고    scopus 로고
    • Formation of non-random extrachromosomal elements during development, differentiation and oncogenesis
    • Kuttler F and Mai S: Formation of non-random extrachromosomal elements during development, differentiation and oncogenesis. Semin Cancer Biol 17: 56-64, 2007.
    • (2007) Semin Cancer Biol , vol.17 , pp. 56-64
    • Kuttler, F.1    Mai, S.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.