-
1
-
-
0034598746
-
Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling
-
Alizadeh, A., Eisen, M., Davis, R. E., Ma, C., Lossos, I., Rosenwald, A., Boldrick, J., Sabet, H., Tran, T., Yu, X., Powell, J., Marti, G., Moore, T., Hudson, J., Lu, L., Lewis, D., Tibshirani, R., Sherlock, G., Chan, W., Greiner, T., Weisenburger, D., Armitage, K., Warnke, R., Levy, R., Wilson, W., Grever, M., Byrd, J., Botstein, D., Brown, P. & Staudt, L. (2000), 'Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling', Nature 403, 503-511.
-
(2000)
Nature
, vol.403
, pp. 503-511
-
-
Alizadeh, A.1
Eisen, M.2
Davis, R.E.3
Ma, C.4
Lossos, I.5
Rosenwald, A.6
Boldrick, J.7
Sabet, H.8
Tran, T.9
Yu, X.10
Powell, J.11
Marti, G.12
Moore, T.13
Hudson, J.14
Lu, L.15
Lewis, D.16
Tibshirani, R.17
Sherlock, G.18
Chan, W.19
Greiner, T.20
Weisenburger, D.21
Armitage, K.22
Warnke, R.23
Levy, R.24
Wilson, W.25
Grever, M.26
Byrd, J.27
Botstein, D.28
Brown, P.29
Staudt, L.30
more..
-
2
-
-
33645527646
-
Prediction by supervised principal components
-
Bair, E., Hastie, T., Paul, D. & Tibshirani, R. (2006), 'Prediction by supervised principal components', J. Amer. Statist. Assoc. 101, 119-137.
-
(2006)
J. Amer. Statist. Assoc
, vol.101
, pp. 119-137
-
-
Bair, E.1
Hastie, T.2
Paul, D.3
Tibshirani, R.4
-
3
-
-
19344375744
-
Semi-supervised methods to predict patient survival from gene expression data
-
Bair, E. & Tibshirani, R. (2004), 'Semi-supervised methods to predict patient survival from gene expression data', PLOS Biology 2, 511-522.
-
(2004)
PLOS Biology
, vol.2
, pp. 511-522
-
-
Bair, E.1
Tibshirani, R.2
-
5
-
-
0000107975
-
Relations between two sets of variates
-
Hotelling, H. (1936), 'Relations between two sets of variates', Biometrika 28, 321-377.
-
(1936)
Biometrika
, vol.28
, pp. 321-377
-
-
Hotelling, H.1
-
6
-
-
0036829790
-
Impact of DNA amplification on gene expression patterns in breast cancer
-
Hyman, E., Kauraniemi, P., Hautaniemi, S., Wolf, M., Mousses, S., Rozenblum, E., Ringner, M., Sauter, G., Monni, O., Elkahloun, A., Kallioniemi, O.-P. & Kallioniemi, A. (2002), 'Impact of DNA amplification on gene expression patterns in breast cancer', Cancer Research 62, 6240-6245.
-
(2002)
Cancer Research
, vol.62
, pp. 6240-6245
-
-
Hyman, E.1
Kauraniemi, P.2
Hautaniemi, S.3
Wolf, M.4
Mousses, S.5
Rozenblum, E.6
Ringner, M.7
Sauter, G.8
Monni, O.9
Elkahloun, A.10
Kallioniemi, O.-P.11
Kallioniemi, A.12
-
7
-
-
60849113429
-
Sparse canonical methods for biological data integration: Application to a cross-platform study
-
Le Cao, K., Pascal, M., Robert-Granie, C. & Philippe, B. (2009), 'Sparse canonical methods for biological data integration: application to a cross-platform study', BMC Bioinformatics 10.
-
(2009)
BMC Bioinformatics
, vol.10
-
-
Le Cao, K.1
Pascal, M.2
Robert-Granie, C.3
Philippe, B.4
-
8
-
-
51649111684
-
Molecular subtypes of diffuse large B-cell lymphoma arise by distinct genetic pathways
-
Lenz, G., Wright, G., Emre, N., Kohlhammer, H., Dave, S., Davis, R., Carty, S., Lam, L., Shaffer, A., Xiao, W., Powell, J., Rosenwald, A., Ott, G., Muller-Hermelink, H., Gascoyne, R., Connors, J., Campo, E., Jaffe, E., Delabie, J., Smeland, E., Rimsza, L., Fisher, R., Weisenburger, D., Chano, W. & Staudt, L. (2008), 'Molecular subtypes of diffuse large B-cell lymphoma arise by distinct genetic pathways', Proc. Natl. Acad. Sci. 105, 13520-13525.
-
(2008)
Proc. Natl. Acad. Sci
, vol.105
, pp. 13520-13525
-
-
Lenz, G.1
Wright, G.2
Emre, N.3
Kohlhammer, H.4
Dave, S.5
Davis, R.6
Carty, S.7
Lam, L.8
Shaffer, A.9
Xiao, W.10
Powell, J.11
Rosenwald, A.12
Ott, G.13
Muller-Hermelink, H.14
Gascoyne, R.15
Connors, J.16
Campo, E.17
Jaffe, E.18
Delabie, J.19
Smeland, E.20
Rimsza, L.21
Fisher, R.22
Weisenburger, D.23
Chano, W.24
Staudt, L.25
more..
-
9
-
-
0000957593
-
Principal components regression in exploratory statistical research
-
Massy, W. (1965), 'Principal components regression in exploratory statistical research', Journal of the American Statistical Association 60, 234-236.
-
(1965)
Journal of the American Statistical Association
, vol.60
, pp. 234-236
-
-
Massy, W.1
-
10
-
-
4043128071
-
Genetic analysis of genome-wide variation in human gene expression
-
Morley, M., Molony, C., Weber, T., Devlin, J., Ewens, K., Spielman, R. & Cheung, V. (2004), 'Genetic analysis of genome-wide variation in human gene expression', Nature 430, 743-747.
-
(2004)
Nature
, vol.430
, pp. 743-747
-
-
Morley, M.1
Molony, C.2
Weber, T.3
Devlin, J.4
Ewens, K.5
Spielman, R.6
Cheung, V.7
-
11
-
-
38049082898
-
Genome-wide sparse canonical correlation of gene expression with genotypes
-
Parkhomenko, E., Tritchler, D. & Beyene, J. (2007), 'Genome-wide sparse canonical correlation of gene expression with genotypes', BMC Proceedings 1, S119.
-
(2007)
BMC Proceedings
, vol.1
-
-
Parkhomenko, E.1
Tritchler, D.2
Beyene, J.3
-
12
-
-
62449336277
-
Sparse canonical correlation analysis with application to genomic data integration
-
Parkhomenko, E., Tritchler, D. & Beyene, J. (2009), 'Sparse canonical correlation analysis with application to genomic data integration', Statistical Applications in Genetics and Molecular Biology 8, 1-34.
-
(2009)
Statistical Applications in Genetics and Molecular Biology
, vol.8
, pp. 1-34
-
-
Parkhomenko, E.1
Tritchler, D.2
Beyene, J.3
-
13
-
-
13844250828
-
Microarray analysis reveals a major direct role of DNA copy number alteration in the transcriptional program of human breast tumors
-
Pollack, J., Sorlie, T., Perou, C., Rees, C., Jeffrey, S., Lonning, P., Tibshirani, R., Botstein, D., Borresen-Dale, A. & Brown, P. (2002), 'Microarray analysis reveals a major direct role of DNA copy number alteration in the transcriptional program of human breast tumors', Proceedings of the National Academy of Sciences 99, 12963-12968.
-
(2002)
Proceedings of the National Academy of Sciences
, vol.99
, pp. 12963-12968
-
-
Pollack, J.1
Sorlie, T.2
Perou, C.3
Rees, C.4
Jeffrey, S.5
Lonning, P.6
Tibshirani, R.7
Botstein, D.8
Borresen-Dale, A.9
Brown, P.10
-
14
-
-
0037142053
-
The use of molecular profiling to predict survival after chemotherapy for diffuse large B-cell lymphoma
-
Rosenwald, A., Wright, G., Chan, W. C., Connors, J. M., Campo, E., Fisher, R. I., Gascoyne, R. D., Muller-Hermelink, H. K., Smeland, E. B. & Staudt, L. M. (2002), 'The use of molecular profiling to predict survival after chemotherapy for diffuse large B-cell lymphoma', The New England Journal of Medicine 346, 1937-1947.
-
(2002)
The New England Journal of Medicine
, vol.346
, pp. 1937-1947
-
-
Rosenwald, A.1
Wright, G.2
Chan, W.C.3
Connors, J.M.4
Campo, E.5
Fisher, R.I.6
Gascoyne, R.D.7
Muller-Hermelink, H.K.8
Smeland, E.B.9
Staudt, L.M.10
-
15
-
-
55449112185
-
Genome-wide associations of gene expression variation in humans
-
Stranger, B., Forrest, M., Clark, A., Minichiello, M., Deutsch, S., Lyle, R., Hunt, S., Kahl, B., Antonarakis, S., Tavare, S., Deloukas, P. & Dermitzakis, E. (2005), 'Genome-wide associations of gene expression variation in humans', PLOS Genetics 1(6), e78.
-
(2005)
PLOS Genetics
, vol.1
, Issue.6
-
-
Stranger, B.1
Forrest, M.2
Clark, A.3
Minichiello, M.4
Deutsch, S.5
Lyle, R.6
Hunt, S.7
Kahl, B.8
Antonarakis, S.9
Tavare, S.10
Deloukas, P.11
Dermitzakis, E.12
-
16
-
-
33846978695
-
Relative impact of nucleotide and copy number variation on gene expression phenotypes
-
Stranger, B., Forrest, M., Dunning, M., Ingle, C., Beazley, C., Thorne, N., Redon, R., Bird, C., de Grassi, A., Lee, C., Tyler-Smith, C., Carter, N., Scherer, S., Tavare, S., Deloukas, P., Hurles, M. & Dermitzakis, E. (2007), 'Relative impact of nucleotide and copy number variation on gene expression phenotypes', Science 315, 848-853.
-
(2007)
Science
, vol.315
, pp. 848-853
-
-
Stranger, B.1
Forrest, M.2
Dunning, M.3
Ingle, C.4
Beazley, C.5
Thorne, N.6
Redon, R.7
Bird, C.8
de Grassi, A.9
Lee, C.10
Tyler-Smith, C.11
Carter, N.12
Scherer, S.13
Tavare, S.14
Deloukas, P.15
Hurles, M.16
Dermitzakis, E.17
-
17
-
-
0037076272
-
Diagnosis of multiple cancer types by shrunken centroids of gene expression
-
Tibshirani, R., Hastie, T., Narasimhan, B. & Chu, G. (2002), 'Diagnosis of multiple cancer types by shrunken centroids of gene expression', Proc. Natl. Acad. Sci. 99, 6567-6572.
-
(2002)
Proc. Natl. Acad. Sci
, vol.99
, pp. 6567-6572
-
-
Tibshirani, R.1
Hastie, T.2
Narasimhan, B.3
Chu, G.4
-
18
-
-
2342533421
-
Class prediction by nearest shrunken centroids, with applications to DNA microarrays
-
Tibshirani, R., Hastie, T., Narasimhan, B. & Chu, G. (2003), 'Class prediction by nearest shrunken centroids, with applications to DNA microarrays', Statistical Science pp. 104-117.
-
(2003)
Statistical Science
, pp. 104-117
-
-
Tibshirani, R.1
Hastie, T.2
Narasimhan, B.3
Chu, G.4
-
19
-
-
12844266177
-
Sparsity and smoothness via the fused lasso
-
Tibshirani, R., Saunders, M., Rosset, S., Zhu, J. & Knight, K. (2005), 'Sparsity and smoothness via the fused lasso', J. Royal. Statist. Soc. B. 67, 91-108.
-
(2005)
J. Royal. Statist. Soc. B
, vol.67
, pp. 91-108
-
-
Tibshirani, R.1
Saunders, M.2
Rosset, S.3
Zhu, J.4
Knight, K.5
-
20
-
-
37249032736
-
Spatial smoothing and hotspot detection for CGH data using the fused lasso
-
Tibshirani, R. & Wang, P. (2008), 'Spatial smoothing and hotspot detection for CGH data using the fused lasso', Biostatistics 9, 18-29.
-
(2008)
Biostatistics
, vol.9
, pp. 18-29
-
-
Tibshirani, R.1
Wang, P.2
-
21
-
-
38849098283
-
Quantifying the association between gene expressions and DNA-markers by penalized canonical correlation analysis
-
Waaijenborg, S., Verselewel de Witt Hamer, P. & Zwinderman, A. (2008), 'Quantifying the association between gene expressions and DNA-markers by penalized canonical correlation analysis', Statistical Applications in Genetics and Molecular Biology 7.
-
(2008)
Statistical Applications in Genetics and Molecular Biology
, vol.7
-
-
Waaijenborg, S.1
Verselewel de Witt Hamer, P.2
Zwinderman, A.3
-
22
-
-
70149096300
-
A penalized matrix decomposition, with applications to sparse principal components and canonical correlation analysis
-
Witten, D., Tibshirani, R. & Hastie, T. (2009), 'A penalized matrix decomposition, with applications to sparse principal components and canonical correlation analysis', Biostatistics .
-
(2009)
Biostatistics
-
-
Witten, D.1
Tibshirani, R.2
Hastie, T.3
|