메뉴 건너뛰기




Volumn 16, Issue 3, 2009, Pages 225-242

Survey of modular ontology techniques and their applications in the biomedical domain

Author keywords

[No Author keywords available]

Indexed keywords

APPLICATION SCENARIO; BIOMEDICAL DOMAIN; GENE ONTOLOGY; INTERPRETATION OF DATA; LOGICAL FORMALISM; MEDICAL INFORMATION SYSTEM; ONTOLOGY TECHNIQUE; STATE-OF-THE-ART APPROACH;

EID: 68249083073     PISSN: 10692509     EISSN: None     Source Type: Journal    
DOI: 10.3233/ICA-2009-0315     Document Type: Conference Paper
Times cited : (74)

References (72)
  • 6
    • 51949116860 scopus 로고    scopus 로고
    • PhD thesis, Department of Computer, Iowa State University, Ames, Iowa, USA
    • J. Bao, Representing and Reasoning with Modular Ontologies, PhD thesis, Department of Computer, Iowa State University, Ames, Iowa, USA, 2007.
    • (2007) Representing and Reasoning with Modular Ontologies
    • Bao, J.1
  • 7
    • 33750232177 scopus 로고    scopus 로고
    • Modular Ontologies -A Formal Investigation of Semantics and Expressivity
    • 1st Asian Semantic Web Conference, Springer-Verlag
    • J. Bao, D. Caragea and V. Honavar, Modular Ontologies -A Formal Investigation of Semantics and Expressivity, In 1st Asian Semantic Web Conference, pages 616-631. LNCS 4185, Springer-Verlag, 2006.
    • (2006) LNCS , vol.4185 , pp. 616-631
    • Bao, J.1    Caragea, D.2    Honavar, V.3
  • 8
    • 36349003383 scopus 로고    scopus 로고
    • A Semantic Importing Approach to Knowledge Reuse from Multiple Ontologies
    • AAAI Press
    • J. Bao, G. Slutzki and V. Honavar, A Semantic Importing Approach to Knowledge Reuse from Multiple Ontologies, In 2nd AAAI Conference on Artificial Intelligence, pages 1304-1309. AAAI Press, 2007.
    • (2007) 2nd AAAI Conference on Artificial Intelligence , pp. 1304-1309
    • Bao, J.1    Slutzki, G.2    Honavar, V.3
  • 11
    • 16244394689 scopus 로고    scopus 로고
    • Distributed description logics: Assimilating information from peer sources
    • A. Borgida and L. Serafini, Distributed description logics: Assimilating information from peer sources, Journal of Data Semantics 1 (2003), 153-184.
    • (2003) Journal of Data Semantics , vol.1 , pp. 153-184
    • Borgida, A.1    Serafini, L.2
  • 14
    • 33947233347 scopus 로고    scopus 로고
    • Learning Classifiers from Semantically Heterogeneous Data Sources
    • 3rd International Conference on Ontologies, DataBases, and Applications of Semantics for Large Scale Information Systems, Springer-Verlag
    • D. Caragea, J. Pathak and V. Honavar, Learning Classifiers from Semantically Heterogeneous Data Sources, In 3rd International Conference on Ontologies, DataBases, and Applications of Semantics for Large Scale Information Systems, pages 963-980. LNCS 3291, Springer-Verlag, 2004.
    • (2004) LNCS , vol.3291 , pp. 963-980
    • Caragea, D.1    Pathak, J.2    Honavar, V.3
  • 15
    • 33646515517 scopus 로고    scopus 로고
    • Algorithms and Software for Collaborative Discovery from Autonomous, Semantically Heterogeneous, Distributed, Information Sources. Invited paper
    • 16th International Conference on Algorithmic Learning Theory, Springer-Verlag
    • D. Caragea, J. Zhang, J. Bao, J. Pathak and V. Honavar, Algorithms and Software for Collaborative Discovery from Autonomous, Semantically Heterogeneous, Distributed, Information Sources. Invited paper, In 16th International Conference on Algorithmic Learning Theory, pages 13-44. LNCS 3734, Springer-Verlag, 2005.
    • (2005) LNCS , vol.3734 , pp. 13-44
    • Caragea, D.1    Zhang, J.2    Bao, J.3    Pathak, J.4    Honavar, V.5
  • 16
    • 33751377738 scopus 로고    scopus 로고
    • Learning Classifiers from Distributed, Ontology-Extended Data Sources
    • 8th International Conference on Data Warehousing and Knowledge Discovery, Springer-Verlag
    • D. Caragea, J.Zhang, J.Pathak andV. Honavar, Learning Classifiers from Distributed, Ontology-Extended Data Sources, In 8th International Conference on Data Warehousing and Knowledge Discovery, pages 363-373. LNCS 4081, Springer-Verlag, 2006.
    • (2006) LNCS , vol.4081 , pp. 363-373
    • Caragea, D.1    Zhang, J.2    Pathak andV, J.3    Honavar4
  • 18
    • 85142133068 scopus 로고    scopus 로고
    • J. Day-Richter, M.A. Harris, M. Haendel and S. Lewis, OBO-Edit - An Ontology Editor for Biologists, Bioinformatics 23(16) (2007), 2198-2200.
    • J. Day-Richter, M.A. Harris, M. Haendel and S. Lewis, OBO-Edit - An Ontology Editor for Biologists, Bioinformatics 23(16) (2007), 2198-2200.
  • 24
    • 33747774836 scopus 로고    scopus 로고
    • Unauthorized Inferences in Semistructured Databases
    • C. Farkas, A.Brodsky and S.Jajodia, Unauthorized Inferences in Semistructured Databases, Information Science 176(22) (2006), 3269-3299.
    • (2006) Information Science , vol.176 , Issue.22 , pp. 3269-3299
    • Farkas, C.1    Brodsky, A.2    Jajodia, S.3
  • 25
    • 50249132381 scopus 로고    scopus 로고
    • Detecting Data Records in Semi-Structured Web Sites based on Text Token Clustering
    • X. Gao, L.P.B. Vuong and M. Zhang, Detecting Data Records in Semi-Structured Web Sites based on Text Token Clustering, Integrated Computer-Aided Engineering 15(4) (2008), 297-311.
    • (2008) Integrated Computer-Aided Engineering , vol.15 , Issue.4 , pp. 297-311
    • Gao, X.1    Vuong, L.P.B.2    Zhang, M.3
  • 26
    • 52949085815 scopus 로고    scopus 로고
    • Stevens, Stateofthe NationinDataIntegration for Bioinformatics
    • C.Goble andR.Stevens, Stateofthe NationinDataIntegration for Bioinformatics, Journal of Biomedical Informatics 41(5) (2008), 687-693.
    • (2008) Journal of Biomedical Informatics , vol.41 , Issue.5 , pp. 687-693
    • Goble andR, C.1
  • 27
    • 49949095383 scopus 로고    scopus 로고
    • History Matters: Incremental Ontology Reasoning Using Modules
    • 6th International Semantic Web Conference, Springer-Verlag
    • B.C. Grau, C. Halaschek-Wiener and Y. Kazakov, History Matters: Incremental Ontology Reasoning Using Modules, In 6th International Semantic Web Conference, pages 183-196. LNCS 4825, Springer-Verlag, 2007.
    • (2007) LNCS , vol.4825 , pp. 183-196
    • Grau, B.C.1    Halaschek-Wiener, C.2    Kazakov, Y.3
  • 33
    • 30544447197 scopus 로고    scopus 로고
    • Sirin, Combining OWL Ontologies using epsilon-Connections
    • B.C. Grau, B.Parsia andE.Sirin, Combining OWL Ontologies using epsilon-Connections, Journal of Web Semantics 4(1) (2006), 40-59.
    • (2006) Journal of Web Semantics , vol.4 , Issue.1 , pp. 40-59
    • Grau, B.C.1    Parsia andE, B.2
  • 37
    • 44649178568 scopus 로고    scopus 로고
    • Metcalfe's law, Web 2.0, and the Semantic Web
    • J.A. Hendler and J. Golbeck, Metcalfe's law, Web 2.0, and the Semantic Web, Journal of Web Semantics 6(1) (2008), 14-20.
    • (2008) Journal of Web Semantics , vol.6 , Issue.1 , pp. 14-20
    • Hendler, J.A.1    Golbeck, J.2
  • 41
    • 0032592917 scopus 로고    scopus 로고
    • ADescription Logic with Transitive and Inverse Roles and Role Hierarchies
    • I.Horrocks and U.Sattler, ADescription Logic with Transitive and Inverse Roles and Role Hierarchies, Journal of Logic and Computation 9(3) (1999), 385-410.
    • (1999) Journal of Logic and Computation , vol.9 , Issue.3 , pp. 385-410
    • Horrocks, I.1    Sattler, U.2
  • 42
  • 44
    • 45449118483 scopus 로고    scopus 로고
    • Safe and Economic Re-Use of Ontologies: A Logic-Based Methodology and Tool Support
    • 5th European Semantic Web Conference, Springer-Verlag
    • E. Jiménez-Ruiz, B.C. Grau, U. Sattler, T. Schneider and R.B. Llavori, Safe and Economic Re-Use of Ontologies: A Logic-Based Methodology and Tool Support, In 5th European Semantic Web Conference, pages 185-199. LNCS 5021, Springer-Verlag, 2008.
    • (2008) LNCS , vol.5021 , pp. 185-199
    • Jiménez-Ruiz, E.1    Grau, B.C.2    Sattler, U.3    Schneider, T.4    Llavori, R.B.5
  • 46
    • 35048834729 scopus 로고    scopus 로고
    • H. Knublauch, R.W. Fergerson, N.F. Noy and M.A. Musen, The Protégé OWL Plugin: An Open Development Environment for Semantic Web Applications, In International Semantic Web Conference, pages 229-243. 3298 LNCS, Springer-Verlag, 2004.
    • H. Knublauch, R.W. Fergerson, N.F. Noy and M.A. Musen, The Protégé OWL Plugin: An Open Development Environment for Semantic Web Applications, In International Semantic Web Conference, pages 229-243. 3298 LNCS, Springer-Verlag, 2004.
  • 48
    • 77951065704 scopus 로고    scopus 로고
    • B. Konev, C. Lutz, D. Walther and F. Wolter, Logical Difference and Module Extraction with CEX and MEX, In 21st International Workshop on Description Logics, 353 of CEUR-WS, 2008.
    • B. Konev, C. Lutz, D. Walther and F. Wolter, Logical Difference and Module Extraction with CEX and MEX, In 21st International Workshop on Description Logics, volume 353 of CEUR-WS, 2008.
  • 49
    • 79955694600 scopus 로고    scopus 로고
    • B. Konev, C. Lutz, D. Walther and F. Wolter, Semantic Modularity and Module Extraction in Description Logics, in: 18th European Conference on Artificial Intelligence, 178 of Frontiers in Artificial Intelligence and Applications, M. Ghal-lab, C.D. Spyropoulos, N. Fakotakis and N. Avouris, eds, pages 55-59. IOS Press, 2008.
    • B. Konev, C. Lutz, D. Walther and F. Wolter, Semantic Modularity and Module Extraction in Description Logics, in: 18th European Conference on Artificial Intelligence, volume 178 of Frontiers in Artificial Intelligence and Applications, M. Ghal-lab, C.D. Spyropoulos, N. Fakotakis and N. Avouris, eds, pages 55-59. IOS Press, 2008.
  • 51
    • 40049097048 scopus 로고    scopus 로고
    • Taxonomy-based Partitioning of the Gene Ontology
    • W.Kunierczyk, Taxonomy-based Partitioning of the Gene Ontology, Journal of Biomedical Informatics 41(2) (2008), 282-292.
    • (2008) Journal of Biomedical Informatics , vol.41 , Issue.2 , pp. 282-292
    • Kunierczyk, W.1
  • 55
    • 35148838596 scopus 로고    scopus 로고
    • Optimized Reasoning in Description Logics Using Hypertableaux
    • 21st International Conference on Automated Deduction, Springer-Verlag
    • B. Motik, R. Shearer and I. Horrocks, Optimized Reasoning in Description Logics Using Hypertableaux, In 21st International Conference on Automated Deduction, pages 67-83. LNCS 4603, Springer-Verlag, 2007.
    • (2007) LNCS , vol.4603 , pp. 67-83
    • Motik, B.1    Shearer, R.2    Horrocks, I.3
  • 56
    • 33845461040 scopus 로고    scopus 로고
    • A Framework for Ontology Evolution in Collaborative Environments
    • 5th International Semantic Web Conference, Springer-Verlag
    • N. F. Noy, A. Chugh, W. Liu and M.A. Musen, A Framework for Ontology Evolution in Collaborative Environments, In 5th International Semantic Web Conference, pages 544-558. LNCS 4273, Springer-Verlag, 2006.
    • (2006) LNCS , vol.4273 , pp. 544-558
    • Noy, N.F.1    Chugh, A.2    Liu, W.3    Musen, M.A.4
  • 57
    • 35048878237 scopus 로고    scopus 로고
    • Specifying Ontology Views by Traversal
    • 3rd International Semantic Web Conference, Springer-Verlag
    • N.F. Noy and M.A. Musen, Specifying Ontology Views by Traversal, In 3rd International Semantic Web Conference, pages 713-725. LNCS 3298, Springer-Verlag, 2004.
    • (2004) LNCS , vol.3298 , pp. 713-725
    • Noy, N.F.1    Musen, M.A.2
  • 58
    • 49949088665 scopus 로고    scopus 로고
    • Srinivas, Matching Patient Records to Clinical Trials Using Ontologies
    • 6th International Semantic Web Conference, Springer-Verlag
    • C. Patel, J.J. Cimino, J. Dolby, A. Fokoue, A. Kalyanpur, A. Kershenbaum, L.Ma, E.Schonberg andK.Srinivas, Matching Patient Records to Clinical Trials Using Ontologies, In 6th International Semantic Web Conference, pages 816-829. LNCS 4825, Springer-Verlag, 2007.
    • (2007) LNCS , vol.4825 , pp. 816-829
    • Patel, C.1    Cimino, J.J.2    Dolby, J.3    Fokoue, A.4    Kalyanpur, A.5    Kershenbaum, A.6    Ma, L.7    Schonberg andK, E.8
  • 60
    • 50249138126 scopus 로고    scopus 로고
    • Utilizing Phrase-Similarity Measures for Detecting and Clustering Informative RSS News Articles
    • M.S. Pera and Y.-K. Ng, Utilizing Phrase-Similarity Measures for Detecting and Clustering Informative RSS News Articles, Integrated Computer-Aided Engineering 15(4) (2008), 331-350.
    • (2008) Integrated Computer-Aided Engineering , vol.15 , Issue.4 , pp. 331-350
    • Pera, M.S.1    Ng, Y.-K.2
  • 62
  • 64
    • 26444469981 scopus 로고    scopus 로고
    • Distributed Reasoning Architecture for the Semantic Web
    • DRAGO:, 2nd European Semantic Web Conference, Springer-Verlag
    • L. Serafini and A. Tamilin, DRAGO: Distributed Reasoning Architecture for the Semantic Web, In 2nd European Semantic Web Conference, pages 361-376. LNCS 3532, Springer-Verlag, 2005.
    • (2005) LNCS , vol.3532 , pp. 361-376
    • Serafini, L.1    Tamilin, A.2
  • 66
    • 20844459057 scopus 로고    scopus 로고
    • S. Staab and R. Studer, editors, International Handbooks on Information Systems. Springer
    • S. Staab and R. Studer, editors, Handbook on Ontologies, International Handbooks on Information Systems. Springer, 2008.
    • (2008) Handbook on Ontologies
  • 68
    • 35048890068 scopus 로고    scopus 로고
    • Structure-Based Partitioning of Large Concept Hierarchies
    • 3rd International Semantic Web Conference, Springer-Verlag
    • H. Stuckenschmidt and M.C.A. Klein, Structure-Based Partitioning of Large Concept Hierarchies, In 3rd International Semantic Web Conference, pages 289-303. LNCS 3298, Springer-Verlag, 2004.
    • (2004) LNCS , vol.3298 , pp. 289-303
    • Stuckenschmidt, H.1    Klein, M.C.A.2
  • 69
    • 45449100723 scopus 로고    scopus 로고
    • + Ontologies
    • 5th European Semantic Web Conference, of, Springer-Verlag
    • + Ontologies, In 5th European Semantic Web Conference, volume 5021 of Lecture Notes in Computer Science, pages 230-244. Springer-Verlag, 2008.
    • (2008) Lecture Notes in Computer Science , vol.5021 , pp. 230-244
    • Suntisrivaraporn, B.1
  • 70
    • 50249163008 scopus 로고    scopus 로고
    • A Knowledge Retrieval Model using Ontology Mining and User Profiling
    • X. Tao, Y. Li and R. Nayak, A Knowledge Retrieval Model using Ontology Mining and User Profiling, Integrated Computer-Aided Engineering 15(4) (2008), 313-329.
    • (2008) Integrated Computer-Aided Engineering , vol.15 , Issue.4 , pp. 313-329
    • Tao, X.1    Li, Y.2    Nayak, R.3
  • 71
    • 38149011398 scopus 로고    scopus 로고
    • Evaluating Formalisms for Modular Ontologies in Distributed Information Systems
    • 1st International Conference on Web Reasoning and Rule Systems, Springer-Verlag
    • Y. Wang, J. Bao, P. Haase and G. Qi, Evaluating Formalisms for Modular Ontologies in Distributed Information Systems, In 1st International Conference on Web Reasoning and Rule Systems, pages 178-193. LNCS 4524, Springer-Verlag, 2007.
    • (2007) LNCS , vol.4524 , pp. 178-193
    • Wang, Y.1    Bao, J.2    Haase, P.3    Qi, G.4
  • 72
    • 50249153383 scopus 로고    scopus 로고
    • Combining Structure and Function-based Descriptors for Component Retrieval in Software Digital Libraries
    • Y. Yusof and O.F. Rana, Combining Structure and Function-based Descriptors for Component Retrieval in Software Digital Libraries, Integrated Computer-Aided Engineering 15(4) (2008), 279-296.
    • (2008) Integrated Computer-Aided Engineering , vol.15 , Issue.4 , pp. 279-296
    • Yusof, Y.1    Rana, O.F.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.