Characteristics of genes up-regulated and down-regulated after 24 h starvation in the head of Drosophila

Gene

Volumn 446, Issue 1, 2009, Pages 11-17

  Fujikawa, Kazuyo ^a   Takahashi, Aya ^a,b   Nishimura, Azusa ^c   Itoh, Masanobu ^d   Takano Shimizu, Toshiyuki ^a,b,e   Ozaki, Mamiko ^c  

^a NATIONAL INSTITUTE OF GENETICS   (Japan)

^b GRADUATE UNIVERSITY FOR ADVANCED STUDIES   (Japan)

^c KOBE UNIVERSITY   (Japan)

^d KYOTO INSTITUTE OF TECHNOLOGY   (Japan)

^e UNIVERSITY OF TOKYO   (Japan)

Author keywords

Circadian rhythm; female specific independent of transformer (fit); Metabolic enzyme; Microarray; miR 277; Starvation resistance

Indexed keywords

CG8147 PROTEIN; DROSOPHILA PROTEIN; FIT PROTEIN; OBP99B PROTEIN; UNCLASSIFIED DRUG;

ARTICLE; CIRCADIAN RHYTHM; CONTROLLED STUDY; DOWN REGULATION; DROSOPHILA MELANOGASTER; FEMALE; GENE EXPRESSION PROFILING; GENE IDENTIFICATION; IMMUNE RESPONSE; MALE; MICROARRAY ANALYSIS; NONHUMAN; PRIORITY JOURNAL; REPRODUCTION; SEX DIFFERENCE; SEXUAL BEHAVIOR; STARVATION; TRANSCRIPTOMICS; UPREGULATION;

ANIMALS; CIRCADIAN RHYTHM; DOWN-REGULATION; DROSOPHILA MELANOGASTER; FEMALE; GENE EXPRESSION PROFILING; GENES, INSECT; HEAD; MALE; REPRODUCTION; RNA, MESSENGER; SEX CHARACTERISTICS; SPECIES SPECIFICITY; STARVATION; UP-REGULATION;

DROSOPHILA MELANOGASTER;

EID: 68149180872     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.gene.2009.06.017     Document Type: Article

References (39)

1. Aguila J.R., Suszko J., Gibbs A.G., and Hoshizaki D.K. The role of larval fat cells in adult Drosophila melanogaster. J. Exp. Biol. 210 (2007) 956-963
2. Carney G.E. A rapid genome-wide response to Drosophila melanogaster social interactions. BMC Genomics 8 (2007) 288
3. Ceriani M.F., Hogenesch J.B., Yanovsky M., Panda S., Straume M., and Kay S.A. Genome-wide expression analysis in Drosophila reveals genes controlling circadian behavior. J. Neurosci. 22 (2002) 9305-9319
4. Challet E., Pevet P., Vivien-Roels B., and Malan A. Phase-advanced daily rhythms of melatonin, body temperature, and locomotor activity in food-restricted rats fed during daytime. J. Biol. Rhythms 12 (1997) 65-79
5. Chippindale A.K., Chu T.J.F., and Rose M.R. Complex tradeoffs and the evolution of starvation resistance in Drosophila melanogaster. Evolution 50 (1996) 753-766
6. Claridge-Chang A., Wijnen H., Naef F., Boothroyd C., Rajewsky N., and Young M.W. Circadian regulation of gene expression systems in the Drosophila head. Neuron 32 (2001) 657-671
7. Colombani J., Raisin S., Pantalacci S., Radimerski T., Montagne J., and Leopold P. A nutrient sensor mechanism controls Drosophila growth. Cell 114 (2003) 739-749
8. De Gregorio E., Spellman P.T., Rubin G.M., and Lemaitre B. Genome-wide analysis of the Drosophila immune response by using oligonucleotide microarrays. Proc. Natl. Acad. Sci. U. S. A. 98 (2001) 12590-12595
9. Denlinger D.L. Regulation of diapause. Annu. Rev. Entomol. 47 (2002) 93-122
10. Fujii S., and Amrein H. Genes expressed in the Drosophila head reveal a role for fat cells in sex-specific physiology. EMBO J. 21 (2002) 5353-5363
11. Fujii S., Krishnan P., Hardin P., and Amrein H. Nocturnal male sex drive in Drosophila. Curr. Biol. 17 (2007) 244-251
12. Goldman T.D., and Arbeitman M.N. Genomic and functional studies of Drosophila sex hierarchy regulated gene expression in adult head and nervous system tissues. PLoS Genet. 3 (2007) e216
13. Grönke S., et al. Brummer lipase is an evolutionary conserved fat storage regulator in Drosophila. Cell Metab. 1 (2005) 323-330
14. Hall J.C. Genetics and molecular biology of rhythms in Drosophila and other insects. Adv. Genet. 48 (2003) 280
15. Harbison S.T., Yamamoto A.K., Fanara J.J., Norga K.K., and Mackay T.F.C. Quantitative trait loci affecting starvation resistance in Drosophila melanogaster. Genetics 166 (2004) 1807-1823
16. Harbison S.T., Chang S., Kamdar K.P., and Mackay T.F.C. Quantitative genomics of starvation stress resistance in Drosophila. Genome Biol. 6 (2005) R36
17. Hoffmann A.A., and Harshman L.G. Dessication and starvation resistance in Drosophila : patterns of variation at the species, population and intrapopulation levels. Heredity 83 (1999) 637-643
18. Irving P., Troxler L., Heuer T.S., Belvin M., Kopczynski C., and Reichhart J.-M. A genome-wide analysis of immune responses in Drosophila. Proc. Natl. Acad. Sci. U. S. A. 98 (2001) 15119-15124
19. Kanehisa M., et al. KEGG for linking genomes to life and the environment. Nucleic Acids Res. 36 (2008) D480-D484
20. Lawniczak M.K.N., and Begun D.J. A genome-wide analysis of courting and mating responses in Drosophila melanogaster females. Genome 47 (2004) 900-910
21. Lazareva A.A., Roman G., Mattox W., Hardin P.E., and Dauwalder B. A role for the adult fat body in Drosophila male courtship behavior. PLoS Genet. 3 (2007) e16
22. Lee G., and Park J.H. Hemolymph sugar homeostasis and starvation-induced hyperactivity affected by genetic manipulations of the adipokinetic hormone-encoding gene in Drosophila melanogaster. Genetics 167 (2004) 311-323
23. McDonald M.J., and Rosbash M. Microarray analysis and organization of circadian gene expression in Drosophila. Cell 107 (2001) 567-578
24. McGraw L.A., Gibson G., Clark A.G., and Wolfner M.F. Genes regulated by mating, sperm, or seminal proteins in mated female Drosophila melanogaster. Curr. Biol. 14 (2004) 1509-1514
25. Mendoza J., Graff C., Dardente H., Pevet P., and Challet E. Feeding cues alter clock gene oscillations and photic responses in the suprachiasmatic nuclei of mice exposed to a light/dark cycle. J. Neurosci. 25 (2005)
26. Pavan C., Dobzhansky T., and Burla H.B. Diurnal behavior of some neotropical species of Drosophila. Ecology 31 (1950) 36-43
27. Rion S., and Kawecki T.J. Evolutionary biology of starvation resistance: what we have learned from Drosophila. J. Evol. Biol. 20 (2007) 1655-1664
28. Scott R.C., Schuldiner O., and Neufeld T.P. Role and regulation of starvation-induced autophagy in the Drosophila fat body. Dev. Cell 7 (2004) 167-178
29. Shaw P.J., Cirelli C., Greenspan R.J., and Tononi G. Correlates of sleep and waking in Drosophila melanogaster. Science 287 (2000) 1834-1837
30. Stark A., Brennecke J., Russell R.B., and Cohen S.M. Identification of Drosophila microRNA targets. PLoS Biology 1 (2003) 397-409
31. Stoleru D., Peng Y., Agosto J., and Rosbash M. Coupled oscillators control morning and evening locomotor behaviour of Drosophila. Nature 431 (2004) 862-868
32. Takahashi A., and Takano-Shimizu T. A high-frequency null mutant of an odorant-binding protein gene, Obp57e, in Drosophila melanogaster. Genetics 170 (2005) 709-718
33. Takahashi A., Takahashi K., Ueda R., and Takano-Shimizu T. Natural variation of ebony gene controlling thoracic pigmentation in Drosophila melanogaster. Genetics 177 (2007) 1233-1237
34. Toda M.J. A preliminary study on Drosophilid ecology (Diptera, Drosophilidae) in the Bonin Islands. Kontyu, Tokyo 44 (1976) 337-353
35. Ueda H.R., Matsumoto A., Kawamura M., Iino M., Tanimura T., and Hashimoto S. Genome-wide transcriptional orchestration of circadian rhythms in Drosophila. J. Biol. Chem. 277 (2002) 14048-14052
36. Wayne M.L., Soundararajan U., and Harshman L.G. Environmental stress and reproduction in Drosophila melanogaster: starvation resistance, ovariole numbers and early age egg production. BMC Evol. Biol. 6 (2006) 57
37. Wheeler D.A., Hamblen-Coyle M.J., Dushay M.S., and Hall J.C. Behavior in light-dark cycles of Drosophila mutants that are arrhythmic, blind, or both. J. Biol. Rhythms 8 (1993) 67-94
38. Xu K., Zheng X., and Sehgal A. Regulation of feeding and metabolism by neuronal and peripheral clocks in Drosophila. Cell Metab. 8 (2008) 289-300
39. Zinke I., Schutz C.S., Katzenberger J.D., Bauer M., and Pankratz M.J. Nutrient control of gene expression in Drosophila: microarray analysis of starvation and sugar-dependent response. EMBO J. 21 (2002) 6162-6173