-
1
-
-
33747587864
-
Model-based analysis of tiling-arrays for ChIP-chip
-
1567901 16895995 10.1073/pnas.0601180103
-
Johnson WE Li W Meyer CA Gottardo R Carroll JS Brown M Liu XS Model-based analysis of tiling-arrays for ChIP-chip Proc Natl Acad Sci USA 2006, 103(33):12457-12462. 1567901 16895995 10.1073/pnas.0601180103
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 12457-12462
-
-
Johnson, W.E.1
Li, W.2
Meyer, C.A.3
Gottardo, R.4
Carroll, J.S.5
Brown, M.6
Liu, X.S.7
-
2
-
-
35748962754
-
Model-based analysis of two-color arrays (MA2C)
-
2375008 17727723 10.1186/gb-2007-8-8-r178
-
Song JS Johnson WE Zhu X Zhang X Li W Manrai AK Liu JS Chen R Liu XS Model-based analysis of two-color arrays (MA2C) Genome Biol 2007, 8(8):R178. 2375008 17727723 10.1186/gb-2007-8-8-r178
-
(2007)
Genome Biol
, vol.8
, Issue.8
-
-
Song, J.S.1
Johnson, W.E.2
Zhu, X.3
Zhang, X.4
Li, W.5
Manrai, A.K.6
Liu, J.S.7
Chen, R.8
Liu, X.S.9
-
3
-
-
34547840259
-
A physical model for tiling array analysis
-
10.1093/bioinformatics/btm167 17646349
-
Chung HR Kostka D Vingron M A physical model for tiling array analysis Bioinformatics 2007, 23(13):i80-86. 10.1093/bioinformatics/btm167 17646349
-
(2007)
Bioinformatics
, vol.23
-
-
Chung, H.R.1
Kostka, D.2
Vingron, M.3
-
4
-
-
34249730556
-
Assessing the need for sequence-based normalization in tiling microarray experiments
-
10.1093/bioinformatics/btm052 17387113
-
Royce TE Rozowsky JS Gerstein MB Assessing the need for sequence-based normalization in tiling microarray experiments Bioinformatics 2007, 23(8):988-997. 10.1093/bioinformatics/btm052 17387113
-
(2007)
Bioinformatics
, vol.23
, Issue.8
, pp. 988-997
-
-
Royce, T.E.1
Rozowsky, J.S.2
Gerstein, M.B.3
-
5
-
-
0035793042
-
Model-based analysis of oligonucleotide arrays: Expression index computation and outlier detection
-
14539 11134512 10.1073/pnas.011404098
-
Li C Wong WH Model-based analysis of oligonucleotide arrays: Expression index computation and outlier detection Proc Natl Acad Sci USA 2001, 98(1):31-36. 14539 11134512 10.1073/pnas.011404098
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 31-36
-
-
Li, C.1
Wong, W.H.2
-
6
-
-
85035214096
-
Solving the riddle of the bright mismatches: Labeling and effective binding in oligonucleotide arrays
-
12935175
-
Naef F Magnasco MO Solving the riddle of the bright mismatches: Labeling and effective binding in oligonucleotide arrays Phys Rev E Stat Nonlin Soft Matter Phys 2003, 68(1 Pt 1):011906. 12935175
-
(2003)
Phys Rev E Stat Nonlin Soft Matter Phys
, vol.68
, Issue.1 PART 1
, pp. 011906
-
-
Naef, F.1
Magnasco, M.O.2
-
7
-
-
40449126726
-
Systematic evaluation of variability in ChIP-chip experiments using predefined DNA targets
-
2259103 18258921 10.1101/gr.7080508
-
Johnson DS Li W Gordon DB Bhattacharjee A Curry B Ghosh J Brizuela L Carroll JS Brown M Flicek P Systematic evaluation of variability in ChIP-chip experiments using predefined DNA targets Genome Res 2008, 18(3):393-403. 2259103 18258921 10.1101/gr.7080508
-
(2008)
Genome Res
, vol.18
, Issue.3
, pp. 393-403
-
-
Johnson, D.S.1
Li, W.2
Gordon, D.B.3
Bhattacharjee, A.4
Curry, B.5
Ghosh, J.6
Brizuela, L.7
Carroll, J.S.8
Brown, M.9
Flicek, P.10
-
8
-
-
5344244656
-
-
R-Development-Core-Team Vienna, Austria: R Foundation for Statistical Computing
-
R-Development-Core-Team R: A Language and Environment for Statistical Computing Vienna, Austria: R Foundation for Statistical Computing 2008.
-
(2008)
R: A Language and Environment for Statistical Computing
-
-
-
9
-
-
33846064113
-
NCBI GEO: Mining tens of millions of expression profiles - Database and tools update
-
(Database) 1669752 17099226 10.1093/nar/gkl887
-
Barrett T Troup DB Wilhite SE Ledoux P Rudnev D Evangelista C Kim IF Soboleva A Tomashevsky M Edgar R NCBI GEO: Mining tens of millions of expression profiles - database and tools update Nucleic Acids Res 2007, 35(Database):D760-765. 1669752 17099226 10.1093/nar/gkl887
-
(2007)
Nucleic Acids Res
-
-
Barrett, T.1
Troup, D.B.2
Wilhite, S.E.3
Ledoux, P.4
Rudnev, D.5
Evangelista, C.6
Kim, I.F.7
Soboleva, A.8
Tomashevsky, M.9
Edgar, R.10
-
10
-
-
0037316303
-
A comparison of normalization methods for high density oligonucleotide array data based on variance and bias
-
10.1093/bioinformatics/19.2.185 12538238
-
Bolstad BM Irizarry RA Astrand M Speed TP A comparison of normalization methods for high density oligonucleotide array data based on variance and bias Bioinformatics 2003, 19(2):185-193. 10.1093/bioinformatics/ 19.2.185 12538238
-
(2003)
Bioinformatics
, vol.19
, Issue.2
, pp. 185-193
-
-
Bolstad, B.M.1
Irizarry, R.A.2
Astrand, M.3
Speed, T.P.4
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