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Volumn 10, Issue , 2009, Pages

Comparison of sequence-dependent tiling array normalization approaches

Author keywords

[No Author keywords available]

Indexed keywords

CONTROL EXPERIMENTS; GENOMIC LOCUS; INTENSITY VALUES; MICROARRAY DATA; PEAK DETECTION; PROBE SEQUENCE; SEQUENCE-DEPENDENT; TILING MICROARRAYS;

EID: 67949091194     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-10-204     Document Type: Article
Times cited : (5)

References (10)
  • 3
    • 34547840259 scopus 로고    scopus 로고
    • A physical model for tiling array analysis
    • 10.1093/bioinformatics/btm167 17646349
    • Chung HR Kostka D Vingron M A physical model for tiling array analysis Bioinformatics 2007, 23(13):i80-86. 10.1093/bioinformatics/btm167 17646349
    • (2007) Bioinformatics , vol.23
    • Chung, H.R.1    Kostka, D.2    Vingron, M.3
  • 4
    • 34249730556 scopus 로고    scopus 로고
    • Assessing the need for sequence-based normalization in tiling microarray experiments
    • 10.1093/bioinformatics/btm052 17387113
    • Royce TE Rozowsky JS Gerstein MB Assessing the need for sequence-based normalization in tiling microarray experiments Bioinformatics 2007, 23(8):988-997. 10.1093/bioinformatics/btm052 17387113
    • (2007) Bioinformatics , vol.23 , Issue.8 , pp. 988-997
    • Royce, T.E.1    Rozowsky, J.S.2    Gerstein, M.B.3
  • 5
    • 0035793042 scopus 로고    scopus 로고
    • Model-based analysis of oligonucleotide arrays: Expression index computation and outlier detection
    • 14539 11134512 10.1073/pnas.011404098
    • Li C Wong WH Model-based analysis of oligonucleotide arrays: Expression index computation and outlier detection Proc Natl Acad Sci USA 2001, 98(1):31-36. 14539 11134512 10.1073/pnas.011404098
    • (2001) Proc Natl Acad Sci USA , vol.98 , pp. 31-36
    • Li, C.1    Wong, W.H.2
  • 6
    • 85035214096 scopus 로고    scopus 로고
    • Solving the riddle of the bright mismatches: Labeling and effective binding in oligonucleotide arrays
    • 12935175
    • Naef F Magnasco MO Solving the riddle of the bright mismatches: Labeling and effective binding in oligonucleotide arrays Phys Rev E Stat Nonlin Soft Matter Phys 2003, 68(1 Pt 1):011906. 12935175
    • (2003) Phys Rev E Stat Nonlin Soft Matter Phys , vol.68 , Issue.1 PART 1 , pp. 011906
    • Naef, F.1    Magnasco, M.O.2
  • 8
    • 5344244656 scopus 로고    scopus 로고
    • R-Development-Core-Team Vienna, Austria: R Foundation for Statistical Computing
    • R-Development-Core-Team R: A Language and Environment for Statistical Computing Vienna, Austria: R Foundation for Statistical Computing 2008.
    • (2008) R: A Language and Environment for Statistical Computing
  • 10
    • 0037316303 scopus 로고    scopus 로고
    • A comparison of normalization methods for high density oligonucleotide array data based on variance and bias
    • 10.1093/bioinformatics/19.2.185 12538238
    • Bolstad BM Irizarry RA Astrand M Speed TP A comparison of normalization methods for high density oligonucleotide array data based on variance and bias Bioinformatics 2003, 19(2):185-193. 10.1093/bioinformatics/ 19.2.185 12538238
    • (2003) Bioinformatics , vol.19 , Issue.2 , pp. 185-193
    • Bolstad, B.M.1    Irizarry, R.A.2    Astrand, M.3    Speed, T.P.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.