Phthalocyanine dimerization-based molecular beacons using Near-IR fluorescence

Journal of the American Chemical Society

Volumn 131, Issue 7, 2009, Pages 2432-2433

  Nesterova, Irina V ^a   Erdem, S Sibel ^a   Pakhomov, Serhii ^a   Hammer, Robert P ^a   Soper, Steven A ^a  

^a LOUISIANA STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EXTINCTION COEFFICIENTS; FLUORESCENCE YIELD; HIGH THERMAL; HIGHLY SENSITIVE; IN-VITRO; IN-VIVO; MB SYSTEMS; MOLECULAR BEACON; MOLECULAR IMAGING; NEAR-IR FLUORESCENCE; PC-BASED; PERFORMANCE CHARACTERISTICS; QUENCHING EFFICIENCY; SIGNAL-TO-BACKGROUND RATIO; SINGLE-STEP SYNTHESIS;

CHEMICAL STABILITY; DIMERIZATION; MICROCOMPUTERS; OLIGOMERS; PROBES; QUENCHING;

FLUOROPHORES;

PHTHALOCYANINE; DNA; INDOLE DERIVATIVE; OLIGONUCLEOTIDE; PIGMENT; RNA;

ARTICLE; AUTOFLUORESCENCE; CHEMICAL REACTION; DIMERIZATION; DNA DETERMINATION; FLUORESCENCE; HYBRIDIZATION; IMAGING SYSTEM; MOLECULAR BEACON; MOLECULAR PROBE; MOLECULAR STABILITY; NEAR INFRARED SPECTROSCOPY; PHOTOCHEMICAL QUENCHING; PHOTOSTABILITY; PURIFICATION; QUANTUM YIELD; SYNTHESIS; TECHNIQUE; CHEMICAL STRUCTURE; CHEMISTRY; CONFORMATION; PROCEDURES; SPECTROFLUOROMETRY;

DIMERIZATION; DNA; INDOLES; MODELS, MOLECULAR; NUCLEIC ACID CONFORMATION; OLIGONUCLEOTIDES; PIGMENTS, BIOLOGICAL; RNA; SPECTROMETRY, FLUORESCENCE; SPECTROSCOPY, NEAR-INFRARED;

EID: 67849105046     PISSN: 00027863     EISSN: None     Source Type: Journal    
DOI: 10.1021/ja8088247     Document Type: Article

References (18)

1. Tyagi, S.; Kramer, F. Nat. Biotechnol. 1996, 14, 303-308.
2. Yang, C.; Lin, H.; Tan, W. J. Am. Chem. Soc. 2005, 127, 12772-12773.
3. Conlon, P.; Yang, C.; Wu, Y.; Chen, Y.; Martinez, K.; Kim, Y.; Stevens, N.; Marti, A.; Jockusch, S.; Turro, N.; Tan, W. J. Am. Chem. Soc. 2008, 130, 336-342.
4. Fujimoto, K.; Shimizu, H.; Inouye, M. J. Org. Chem. 2004, 69, 3271-3275.
5. Zhang, P.; Beck, T.; Tan, W. Angew. Chem., Int. Ed. 2001, 40, 402-405.
6. Yang, C.; Pinto, M.; Schanze, K.; Tan, W. Angew. Chem., Int. Ed. 2005, 44, 2572-2576.
7. Wang, X.; Yun, W.; Dong, P.; Zhou, J.; He, P. G.; Fang, Y. Langmuir 2008, 24, 2200-2205.
8. Kim, J. H.; Morikis, D.; Ozkan, M. Sens. Actuators, B 2004, 102, 315-319.
9. Michalet, X.; Pinaud, F.; Bentolila, L.; Tsay, J.; Doose, S.; Li, J.; Sundaresan, G.; Wu, A.; Gambhir, S.; Weiss, S. Science 2005, 307, 538-544.
10. Nesterova, I.; Verdree, V.; Pakhomov, S.; Strickler, K.; Allen, M.; Hammer, R.; Soper, S. Bioconjugate Chem. 2007, 18, 2159-2168.
11. Verdree, V.; Pakhomov, S.; Su, G.; Allen, M.; Countryman, A.; Hammer, R.; Soper, S. J. Fluoresc. 2007, 17, 547-563.
12. Bernacchi, S.; Mely, Y. Nucleic Acids Res. 2001, 29, e62/1-e62/8.
13. Conley, N.; Pomerantz, A.; Wang, H.; Twieg, R.; Moerner, W. J. Phys. Chem. B 2007, 111, 7929-7931.
14. Nishimura, S.; Lord, S.; Klein, L.; Willets, K.; He, M.; Lu, Z.; Twieg, R.; Moerner, W. J. Phys. Chem. B 2006, 110, 8151-8157.
15. Lord, S.; Lu, Z.; Wang, H.; Willetst, K.; Schuck, P.; Lee, H.; Nishimura, S. Y.; Twieg, R.; Moerner, W. J. Phys. Chem. A 2007, 111, 8934-8941.
16. Li, J.; Tan, W. Anal. Biochem. 2003, 312, 251-254.
17. Randolph, J.; Waggoner, A. Nucleic Acids Res. 1997, 25, 2923-2929.
18. Rhee, W.; Santangelo, P.; Jo, H.; Bao, G. Nucleic Acids Res. 2008, 36, e30.