Stability, specificity and fluorescence brightness of multiply-labeled fluorescent DNA probes

Nucleic Acids Research

Volumn 25, Issue 14, 1997, Pages 2923-2929

  Randolph, John B ^a,b   Waggoner, Alan S ^a,c  

^a CARNEGIE MELLON UNIVERSITY   (United States)

^b Glen Research Corporation   (United States)

^c Amersham Biosciences   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DEOXYURIDINE; DYE; OLIGONUCLEOTIDE; SINGLE STRANDED DNA;

ARTICLE; CONTROLLED STUDY; DNA PROBE; FLUORESCENCE; HYDROPHILICITY; MOLECULAR STABILITY; PRIORITY JOURNAL; TEMPERATURE;

CARBOCYANINES; DNA PROBES; FLUORESCENCE; FLUORESCENT DYES; MOLECULAR STRUCTURE; SENSITIVITY AND SPECIFICITY;

EID: 0030820621     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/25.14.2923     Document Type: Article

References (35)

1. Birchall,P.S., Fishpool,R.M. and Albertson,D.G. (1995) Nature Genet. 11, 314-320.
2. Senatorov,V.V., Trudeau,V.L. and Hu,B. (1995) Brain Res. Mol. Brain Res. 30, 87-96.
3. Yu,H., Ernst,L., Wagner,M. and Waggoner,A. (1992) Nucleic Acid Res., 20, 83-88.
4. Pennline,K.J., Pellerito-Bessette,F., Umland,S.P., Siegel,M.I. and Smith,S.R. (1992) Lymphokine Cytokine Res. 11, 65-71.
5. Dao,D.D., Sawyer,J.R., Epstein,J., Hoover,R.G. and Barlogie,B. (1994) Tricot. G. Leukemia 8, 1280-1284.
6. Martinez-Climent,J.A., Thirman,M.J., Espinosa,R.,III, Le Beau,M.M. and Rowley,J.D. (1995) Leukemia 9, 1299-1304.
7. Veronese,M.L., Ohta,M., Finan,J., Nowell,P.C. and Croce,C.M. (1995) Blood, 85, 2132-2138.
8. Kraker,W.J., Borell,T.J., Schad,C.R., Pennington,M.J., Karnes,P.S., Dewald,G.W. and Jenkins,R.B. (1992) Mayo Clin. Proc. 67, 658-662.
9. Fujii,M., Ogata,T., Takahashi,E., Yamada,K., Nakabayashi,K., Oishi,M. and Ayusawa,D. (1995) FEBS Lett. 375, 263-267.
10. Lawrence,J.B., Villnace,C.A. and Singer,R.H. (1988) Cell, 52, 51-61.
11. Pinkel,D., Straume,T. and Gray,J.W. (1986) Proc. Natl. Acad. Sci. USA 83, 2934-2938.
12. Smith,L.M., Sanders,J.Z., Kaiser,R.J., Hughes,P., Dodd,C., Connell,C.R., Heiner,C., Kent,S.B. and Hood,L.E. (1986) Nature 321, 674-679.
13. Prober,J.M., Trainor,G.L., Dam,R.J., Hobbs,F.W., Robertson,C.W., Zagursky,R.J., Cocuzza,A.J., Jensen,M.A. and Baumeister,K. (1987) Science 238, 336-341.
14. Connolly,B.A. (1987) Nucleic Acids Res. 15, 3131-3139.
15. Yu,H., Chao,J., Patek,D., Mujumdar,R., Mujumdar,S. and Waggoner,A.S. (1994) Nucleic Acids Res. 22, 3226-3232.
16. Folsom,V., Hunkeler,M.J., Haces,A. and Harding,J.D. (1989) Anal. Biochem. 182, 309-314.
17. Haralambidis,J., Chai,M. and Tregear,G.W. (1987) Nucleic Acids Res. 15, 4857-4876.
18. Brumbaugh,J.A., Middendorf,L.R., Grone,D.L. and Ruth,J.L. (1988) Proc. Natl. Acad. Sci. USA 85, 5610-5614.
19. Singh,D., Vijayanti,K. and Ganesh,K.N. (1990) Nucleic Acids Res. 18, 3339-3345.
20. Wallner,G., Amann,R. and Beisker,W. (1993) Cytometry 14, 136-143.
21. West,W., Pearce,S. and Grum,F. (1967) J. Phys. Chem. 71, 1316-1326.
22. Levinson,G.S., Simpson,W.T. and Curtis,W. (1957) J. Am. Chem. Soc. 79, 4314-4320.
23. Mineno,J., Ishino,Y., Ohminami,T. and Kato,I. (1993) J. DNA Seq. 4, 135-141.
24. Aurup,H., Tuschl,T., Benseler,F., Ludwig,J. and Eckstein,F. (1994) Nucleic Acids Res. 22, 20-24.
25. Ozaki,H. and McLaughlin,L.W. (1992) Nucleic Acids Res. 20, 5205-5214.
26. Wang,S., Friedman,A.E. and Kool,E.T. (1995) Biochemistry 34, 9774-9784.
27. Mujumdar,R.B., Ernst,L.A., Mujumdar,S.R., Lewis,C.J. and Waggoner,A.S. (1993) Bioconjugate Chem. 4, 105-111.
28. Maniatis,T., Fritsch,E.F. and Sambrook,J. (1989) Molecular Cloning: A Laboratory Manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
29. Cantor,C.R. and Tinoco,I. (1965) J. Mol. Biol. 13, 65-77.
30. Fasman,G.D. (ed.) (1975) Handbook of Biochemistry and Molecular Biology. 3rd Ed. Vol. 1. CRC Press, Inc., Cleveland, OH.
31. Franzen,J.S., Zhang,M., Chay,T.R. and Peebles,C.L. (1994) Biochemistry, 33, 11315-11326.
32. O'Brien,D.F., Kelly,T.M. and Costa,L.F. (1976) Photogr. Sci. Engng. 18, 76-84,
33. Herz,A.H. (1974) Photogr. Sci. Engng. 18, 323-335.
34. Vàmosi,G., Gohlke,C. and Clegg,R.M. (1996) Biophys. J. 71, 972-994.
35. Telser,J., Cruickshank,K.A., Morrison,L.E. and Netzel,T.L. (1989) J. Am. Chem. Soc. 111, 6966-6976.