-
1
-
-
34248598796
-
Trends in sample preparation for classical and second generation proteomics
-
Canas, B., Pineiro, C., Calvo, E., Lopez-Ferrer, D., Gallardo, J. M., Trends in sample preparation for classical and second generation proteomics. J. Chromatogr A 2007, 1153, 235-258.
-
(2007)
J. Chromatogr A
, vol.1153
, pp. 235-258
-
-
Canas, B.1
Pineiro, C.2
Calvo, E.3
Lopez-Ferrer, D.4
Gallardo, J.M.5
-
2
-
-
63049092393
-
Affinity pre-fractionation for MS-based plasma proteomics
-
Pernemalm, M., Lewensohn, R., Lehtiö, J., Affinity pre-fractionation for MS-based plasma proteomics. Proteomics 2009, 9, 1420-1427.
-
(2009)
Proteomics
, vol.9
, pp. 1420-1427
-
-
Pernemalm, M.1
Lewensohn, R.2
Lehtiö, J.3
-
3
-
-
0001644020
-
The human plasma proteome: History, character, and diagnostic prospects
-
Anderson, N. L., Anderson, N. G., The human plasma proteome: history, character, and diagnostic prospects. Mol. Cell. Proteomics 2002, 1, 845-867.
-
(2002)
Mol. Cell. Proteomics
, vol.1
, pp. 845-867
-
-
Anderson, N.L.1
Anderson, N.G.2
-
4
-
-
51149117905
-
Evaluation of three principally different intact protein prefractionation methods for plasma biomarker discovery
-
Pernemalm, M., Orre, L. M., Lengqvist, J., Wikstrom, P. et al., Evaluation of three principally different intact protein prefractionation methods for plasma biomarker discovery. J. Proteome Res. 2008, 7, 2712-2722.
-
(2008)
J. Proteome Res
, vol.7
, pp. 2712-2722
-
-
Pernemalm, M.1
Orre, L.M.2
Lengqvist, J.3
Wikstrom, P.4
-
5
-
-
33644861546
-
Immobilized pH gradient isoelectric focusing as a first-dimension separation in shotgun proteomics
-
Cargile, B. J., Sevinsky, J. R., Essader, A. S., Stephenson J. L., Jr., Bundy, J. L., Immobilized pH gradient isoelectric focusing as a first-dimension separation in shotgun proteomics. J. Biomol. Tech. 2005, 16, 181-189.
-
(2005)
J. Biomol. Tech
, vol.16
, pp. 181-189
-
-
Cargile, B.J.1
Sevinsky, J.R.2
Essader, A.S.3
Stephenson Jr., J.L.4
Bundy, J.L.5
-
6
-
-
49749131566
-
Quantitative membrane proteomics applying narrow range peptide isoelectric focusing for studies of small cell lung cancer resistance mechanisms
-
Eriksson, H., Lengqvist, J., Hedlund, J., Uhlen, K. et al., Quantitative membrane proteomics applying narrow range peptide isoelectric focusing for studies of small cell lung cancer resistance mechanisms. Proteomics 2008, 8, 3008-3018.
-
(2008)
Proteomics
, vol.8
, pp. 3008-3018
-
-
Eriksson, H.1
Lengqvist, J.2
Hedlund, J.3
Uhlen, K.4
-
7
-
-
17144362794
-
Two-stage off-gel isoelectric focusing: Protein followed by peptide fractionation and application to proteome analysis of human plasma
-
Heller, M., Michel, P. E., Morier, P., Crettaz, D. et al., Two-stage off-gel isoelectric focusing: protein followed by peptide fractionation and application to proteome analysis of human plasma. Electrophoresis 2005, 26, 1174-1188.
-
(2005)
Electrophoresis
, vol.26
, pp. 1174-1188
-
-
Heller, M.1
Michel, P.E.2
Morier, P.3
Crettaz, D.4
-
8
-
-
37049003330
-
Two-dimensional separation of human plasma proteins using iterative free-flow electrophoresis
-
Nissum, M., Kuhfuss, S., Hauptmann, M., Obermaier, C. et al., Two-dimensional separation of human plasma proteins using iterative free-flow electrophoresis. Proteomics 2007, 7, 4218-4227.
-
(2007)
Proteomics
, vol.7
, pp. 4218-4227
-
-
Nissum, M.1
Kuhfuss, S.2
Hauptmann, M.3
Obermaier, C.4
-
9
-
-
51149121227
-
-
Nissum, M., Foucher, A. L., Analysis of human plasma proteins: a focus on sample collection and separation using free-flow electrophoresis. Expert Rev. Proteomics 2008, 5, 571-587.
-
Nissum, M., Foucher, A. L., Analysis of human plasma proteins: a focus on sample collection and separation using free-flow electrophoresis. Expert Rev. Proteomics 2008, 5, 571-587.
-
-
-
-
10
-
-
37649019177
-
Panel of serum biomarkers for the diagnosis of lung cancer
-
Patz E. F., Jr., Campa, M. J., Gottlin, E. B., Kusmartseva, I. et al., Panel of serum biomarkers for the diagnosis of lung cancer. J. Clin. Oncol. 2007, 25, 5578-5583.
-
(2007)
J. Clin. Oncol
, vol.25
, pp. 5578-5583
-
-
Patz Jr., E.F.1
Campa, M.J.2
Gottlin, E.B.3
Kusmartseva, I.4
-
11
-
-
34848815681
-
-
Yildiz, P. B., Shyr, Y., Rahman, J. S., Wardwell, N. R. et al., Diagnostic accuracy of MALDI mass spectrometric analysis of unfractionated serum in lung cancer. J Thorac. Oncol. 2007, 2, 893-901.
-
Yildiz, P. B., Shyr, Y., Rahman, J. S., Wardwell, N. R. et al., Diagnostic accuracy of MALDI mass spectrometric analysis of unfractionated serum in lung cancer. J Thorac. Oncol. 2007, 2, 893-901.
-
-
-
-
12
-
-
34948905277
-
a new approach for the novel biomarker discovery for cancer
-
Comparative profiling of serum glycoproteome by sequential puri-fication of glycoproteins and 2-nitrobenzensulfenyl (NBS) stable isotope labeling
-
Ueda, K., Katagiri, T., Shimada, T., Irie, S. et al., Comparative profiling of serum glycoproteome by sequential puri-fication of glycoproteins and 2-nitrobenzensulfenyl (NBS) stable isotope labeling: a new approach for the novel biomarker discovery for cancer. J. Proteome Res. 2007, 6, 3475-3483.
-
(2007)
J. Proteome Res
, vol.6
, pp. 3475-3483
-
-
Ueda, K.1
Katagiri, T.2
Shimada, T.3
Irie, S.4
-
13
-
-
43149099708
-
N-glycoprotein profiling of lung adenocarcinoma pleural effusions by shotgun proteomics
-
Soltermann, A., Ossola, R., Kilgus-Hawelski, S., von Eckardstein, A. et al., N-glycoprotein profiling of lung adenocarcinoma pleural effusions by shotgun proteomics. Cancer 2008, 114, 124-133.
-
(2008)
Cancer
, vol.114
, pp. 124-133
-
-
Soltermann, A.1
Ossola, R.2
Kilgus-Hawelski, S.3
von Eckardstein, A.4
-
14
-
-
23944498611
-
Proteomic profiling of human pleural effusion using two-dimensional nano liquid chromatography tandem mass spectrometry
-
Tyan, Y. C., Wu, H. Y., Lai, W. W., Su, W. C., Liao, P. C., Proteomic profiling of human pleural effusion using two-dimensional nano liquid chromatography tandem mass spectrometry. J. Proteome Res. 2005, 4, 1274-1286.
-
(2005)
J. Proteome Res
, vol.4
, pp. 1274-1286
-
-
Tyan, Y.C.1
Wu, H.Y.2
Lai, W.W.3
Su, W.C.4
Liao, P.C.5
-
15
-
-
16344363037
-
Proteomic analysis of human pleural effusion
-
Tyan, Y. C., Wu, H. Y., Su, W. C., Chen, P. W., Liao, P. C., Proteomic analysis of human pleural effusion. Proteomics 2005, 5, 1062-1074.
-
(2005)
Proteomics
, vol.5
, pp. 1062-1074
-
-
Tyan, Y.C.1
Wu, H.Y.2
Su, W.C.3
Chen, P.W.4
Liao, P.C.5
-
16
-
-
55049130238
-
Banking of biological fluids for studies of disease-associated protein biomarkers
-
Schrohl, A. S., Wurtz, S., Kohn, E., Banks, R. E. et al., Banking of biological fluids for studies of disease-associated protein biomarkers. Mol. Cell. Proteomics 2008, 7, 2061-2066.
-
(2008)
Mol. Cell. Proteomics
, vol.7
, pp. 2061-2066
-
-
Schrohl, A.S.1
Wurtz, S.2
Kohn, E.3
Banks, R.E.4
-
17
-
-
13244271374
-
A comparison of immobilized pH gradient isoelectric focusing and strong-cation-exchange chromatography as a first dimension in shotgun proteomics
-
Essader, A. S., Cargile, B. J., Bundy, J. L., Stephenson J. L., Jr., A comparison of immobilized pH gradient isoelectric focusing and strong-cation-exchange chromatography as a first dimension in shotgun proteomics. Proteomics 2005, 5, 24-34.
-
(2005)
Proteomics
, vol.5
, pp. 24-34
-
-
Essader, A.S.1
Cargile, B.J.2
Bundy, J.L.3
Stephenson Jr., J.L.4
-
18
-
-
33748320788
-
Optimized peptide separation and identification for mass spectrometry based proteomics via free-flow electrophoresis
-
Malmstrom, J., Lee, H., Nesvizhskii, A. I., Shteynberg, D. et al., Optimized peptide separation and identification for mass spectrometry based proteomics via free-flow electrophoresis. J. Proteome Res. 2006, 5, 2241-2249.
-
(2006)
J. Proteome Res
, vol.5
, pp. 2241-2249
-
-
Malmstrom, J.1
Lee, H.2
Nesvizhskii, A.I.3
Shteynberg, D.4
-
19
-
-
34848889259
-
The Paragon Algorithm, a next generation search engine that uses sequence temperature values and feature probabilities to identify peptides from tandem mass spectra
-
Shilov, I. V., Seymour, S. L., Patel, A. A., Loboda, A. et al., The Paragon Algorithm, a next generation search engine that uses sequence temperature values and feature probabilities to identify peptides from tandem mass spectra. Mol. Cell. Proteomics 2007, 6, 1638-1655.
-
(2007)
Mol. Cell. Proteomics
, vol.6
, pp. 1638-1655
-
-
Shilov, I.V.1
Seymour, S.L.2
Patel, A.A.3
Loboda, A.4
-
20
-
-
33847630405
-
Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry
-
Elias, J. E., Gygi, S. P., Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry. Nat. Methods 2007, 4, 207-214.
-
(2007)
Nat. Methods
, vol.4
, pp. 207-214
-
-
Elias, J.E.1
Gygi, S.P.2
-
21
-
-
34250310669
-
-
Siena, Italy
-
Stephenson J. L., Jr., Bunger, M. K., Cargile, B. J., Sevinsky, J. R., 7th Siena meeting From genome to proteome: Back to the future, Siena, Italy 2006, p. 65.
-
(2006)
7th Siena meeting From genome to proteome: Back to the future
, pp. 65
-
-
Stephenson Jr., J.L.1
Bunger, M.K.2
Cargile, B.J.3
Sevinsky, J.R.4
-
22
-
-
0001677717
-
Controlling the false discovery rate: A practical and powerful approach to multiple testing
-
Benjamini, Y., Hochberg, Y., Controlling the false discovery rate: A practical and powerful approach to multiple testing. J. Roy. Statist. Soc. Ser. B 1995, 57, 289-300.
-
(1995)
J. Roy. Statist. Soc. Ser. B
, vol.57
, pp. 289-300
-
-
Benjamini, Y.1
Hochberg, Y.2
-
23
-
-
34250349206
-
iTRAQ compatibility of peptide immobilized pH gradient isoelectric focusing
-
Lengqvist, J., Uhlen, K., Lehtio, J., iTRAQ compatibility of peptide immobilized pH gradient isoelectric focusing. Proteomics 2007, 7, 1746-1752.
-
(2007)
Proteomics
, vol.7
, pp. 1746-1752
-
-
Lengqvist, J.1
Uhlen, K.2
Lehtio, J.3
-
24
-
-
34948866795
-
How shall we use the proteomics toolbox for biomarker discovery?
-
Lescuyer, P., Hochstrasser, D., Rabilloud, T., How shall we use the proteomics toolbox for biomarker discovery? J. Proteome Res. 2007, 6, 3371-3376.
-
(2007)
J. Proteome Res
, vol.6
, pp. 3371-3376
-
-
Lescuyer, P.1
Hochstrasser, D.2
Rabilloud, T.3
-
25
-
-
33747030845
-
Protein biomarker discovery and validation: The long and uncertain path to clinical utility
-
Rifai, N., Gillette, M. A., Carr, S. A., Protein biomarker discovery and validation: the long and uncertain path to clinical utility. Nat. Biotechnol. 2006, 24, 971-983.
-
(2006)
Nat. Biotechnol
, vol.24
, pp. 971-983
-
-
Rifai, N.1
Gillette, M.A.2
Carr, S.A.3
-
26
-
-
55749083068
-
NPC2 facilitates bidirectional transfer of cholesterol between NPC1 and lipid bilayers, a step in cholesterol egress from lysosomes
-
Infante, R. E., Wang, M. L., Radhakrishnan, A., Kwon, H. J. et al., NPC2 facilitates bidirectional transfer of cholesterol between NPC1 and lipid bilayers, a step in cholesterol egress from lysosomes. Proc. Natl. Acad. Sci. USA 2008, 105, 15287-15292.
-
(2008)
Proc. Natl. Acad. Sci. USA
, vol.105
, pp. 15287-15292
-
-
Infante, R.E.1
Wang, M.L.2
Radhakrishnan, A.3
Kwon, H.J.4
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