Detection and characterization of a sialoglycosylated bacterial ABC-type phosphate transporter protein from patients with visceral leishmaniasis

Glycoconjugate Journal

Volumn 26, Issue 6 SPEC. ISS., 2009, Pages 675-689

  Mandal, Chitra ^a   Ghoshal, Angana ^a   Mukhopadhyay, Sumi ^a   Demine, Rodion ^b   Forgber, Michael ^b   Jarmalavicius, Saulius ^b   Saha, Bibhuti ^c   Sundar, Shyam ^d   Walden, Peter ^b   Mandal, Chhabinath ^a  

^a INDIAN INSTITUTE OF CHEMICAL BIOLOGY   (India)

^b CHARITÉ UNIVERSITÄTSMEDIZIN BERLIN   (Germany)

^c CALCUTTA SCHOOL OF TROPICAL MEDICINE   (India)

^d BANARAS HINDU UNIVERSITY   (India)

Author keywords

De novo peptide sequencing; Molecular modeling; Pseudomonas aeruginosa; Sialylated ABC type phosphate transporter protein; Visceral leishmaniasis

Indexed keywords

9 O ACETYL SIALOGLYCOPROTEIN DERIVATIVE; ABC TRANSPORTER; BACTERIAL PROTEIN; GLYCOSIDASE; GLYCOSYLATED PROTEIN; N ACETYLGALACTOSAMINE; PHOSPHATE BINDING PROTEIN; PHOSPHATE TRANSPORTER; PROTEIN GP 56; SIALIC ACID DERIVATIVE; SIALOGLYCOPROTEIN; UNCLASSIFIED DRUG;

ADOLESCENT; ADULT; AMINO ACID SEQUENCE; CHILD; CLINICAL ARTICLE; CONFERENCE PAPER; CONTROLLED STUDY; ELECTROSPRAY MASS SPECTROMETRY; FEMALE; GLYCOSYLATION; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; HUMAN; HUMAN CELL; ISOELECTRIC FOCUSING; MALE; MOLECULAR MODEL; PERIPHERAL BLOOD MONONUCLEAR CELL; POLYACRYLAMIDE GEL ELECTROPHORESIS; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN MOTIF; PROTEIN PURIFICATION; PROTEIN STRUCTURE; PSEUDOMONAS AERUGINOSA; SCHOOL CHILD; SIALYLATION; THIN LAYER CHROMATOGRAPHY; VISCERAL LEISHMANIASIS; WESTERN BLOTTING;

ADULT; ANIMALS; BACTERIAL PROTEINS; CHILD; CHROMATOGRAPHY, HIGH PRESSURE LIQUID; CHROMATOGRAPHY, THIN LAYER; FLOW CYTOMETRY; HUMANS; LEISHMANIASIS, VISCERAL; MALE; MEMBRANE TRANSPORT PROTEINS; MIDDLE AGED; MOLECULAR WEIGHT; SIALOGLYCOPROTEINS; SPECTROMETRY, MASS, ELECTROSPRAY IONIZATION; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION; YOUNG ADULT;

BACTERIA (MICROORGANISMS); PSEUDOMONAS; PSEUDOMONAS AERUGINOSA;

EID: 67651163457     PISSN: 02820080     EISSN: 15734986     Source Type: Journal    
DOI: 10.1007/s10719-008-9223-8     Document Type: Conference Paper

References (40)

1. Varki, A.: Multiple changes in sialic acid biology during human evolution. Glycoconj. J. (2008) (in press)
2. R. Schauer 2000 Achievements and challenges in sialic acid research Glycoconj. J. 17 485 499
3. S. Ghosh S. Bandyopadhyay K. Mukherjee A. Mallick S. Pal C. Mandal D.K. Bhattacharya C. Mandal 2007 O-acetylation of sialic acids is required for the survival of lymphoblasts in childhood acute lymphoblastic leukemia (ALL) Glycoconj. J. 24 17 24
4. Mukhopadhyay, S., Mandal, C.: Targeting glycoproteins and glycolipids and their metabolic pathways for antiparasite therapy. In: Mazumdar, H. K. (ed.) Drug targets in kinetoplastid parasites, vol 625, pp. 87-99. Landes Biosciences, Austin (2008)
5. G. Sen C. Mandal 1995 The specificity of the binding site of Achatinin-H, a sialic-acid binding lectin from Achatina fulica Carbohydr. Res. 268 115 125
6. A.K. Chava M. Chatterjee V. Sharma S. Sundar C. Mandal 2004 Variable degree of alternative complement pathway-mediated hemolysis in Indian visceral leishmaniasis induced by differential expression of 9-O-acetylated sialoglycans J. Infect. Dis. 189 1257 1264
7. S. Bandyopadhyay M. Chatterjee S. Sundar C. Mandal 2004 Identification of 9-O-acetylated sialoglycans on peripheral blood mononuclear cells in Indian visceral leishmaniasis Glycoconj. J. 20 531 536
8. S. Mukhopadhyay C. Mandal 2006 Glycobiology of Leishmania donovani Indian J. Med. Res. 123 203 220
9. S.L. Croft S. Sundar A.H. Fairlamb 2006 Drug resistance in leishmaniasis Clin. Microbiol. Rev. 19 111 126
10. R. Morales A. Berna P. Carpentier C. Contreras-Martel F. Renault M. Nicodeme M.L. Chesne-Seck F. Bernier J. Dupuy C. Schaeffer H. Diemer A.V. Dorsselaer J.C. Fontecilla-Camps P. Masson D. Rochu E. Chabriere 2006 Serendipitous discovery and X-ray structure of a human phosphate binding apolipoprotein Structure 14 601 609
11. WHO 1990 The leishmaniases W. H. O. Tech. Rep. Ser. 793 154
12. S. Pal S. Ghosh C. Mandal G. Kohla R. Brossmer R. Isecke A. Merling R. Schauer R. Schwartz-Albiez D.K. Bhattacharya C. Mandal 2004 Purification and characterization of 9-O-acetylated sialoglycoproteins from leukemic cells and their potential as immunological tool for monitoring childhood acute lymphoblastic leukemia Glycobiology 14 859 870
13. M. Chatterjee A.K. Chava G. Kohla S. Pal A. Merling S. Hinderlich U. Unger P. Strasser G.J. Gerwig J.P. Kamerling R. Vlasak P.R. Crocker R. Schauer R. Schwartz-Albiez C. Mandal 2003 Identification and characterization of adsorbed serum sialoglycans on Leishmania donovani promastigotes Glycobiology 13 351 361
14. R. Desai A. Peretz H. Idelson P. Lazarovici B. Attali 2000 Molecular cloning, biochemical and functional characterization J. Biol. Chem. 275 39954 39963
15. V. Sharma M. Chatterjee C. Mandal S. Sen D. Basu 1998 Rapid diagnosis of Indian visceral leishmaniasis using AchatininH, a 9-O-acetylated sialic acid binding lectin Am. J. Trop. Med. Hyg. 58 115 125
16. G. Reuter R. Schauer 1994 Determination of sialic acids Methods Enzymol. 230 168 199
17. A. Klein S. Diaz I. Ferreira G. Lamblin P. Roussel A.E. Manzi 1997 New sialic acids from biological sources identified by a comprehensive and sensitive approach: liquid chromatography-electrospray ionization-mass spectrometry (LC-ESI-MS) of SIA quinoxalinones Glycobiology 7 421 432
18. S. Bandyopadhyay M. Chatterjee T. Das S. Bandyopadhyay S. Sundar C. Mandal 2004 Antibodies directed against O-acetylated sialoglycoconjugates accelerate complement activation in Leishmania donovani promastigotes J. Infect. Dis. 190 2010 2019
19. R. Demine P. Walden 2004 Sequit: software for de novo peptide sequencing by matrix-assisted laser desorption/ionization post-source decay mass spectrometry Rapid Commun. Mass Spectrom. 18 907 913
20. D. Higgins J. Thompson T. Gibson J.D. Thompson D.G. Higgins T.J. Gibson 1994 CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice Nucleic Acids Res. 22 4673 4680
21. E. de Castro C.J. Sigrist A. Gattiker V. Bulliard P.S. Langendijk-Genevaux E. Gasteiger A. Bairoch N. Hulo 2006 ScanProsite: detection of PROSITE signature matches and ProRule-associated functional and structural residues in proteins Nucleic Acids Res. 34 W362 W365
22. T. Schwede J. Kopp N. Guex M.C. Peitsch 2003 SWISS-MODEL: an automated protein homology-modeling server Nucleic Acids Res. 31 3381 3385
23. C. Levefelt D. Lundh 2006 A fold-recognition approach to loop modeling J. Mol. Model. 12 125 139
24. C. Mandal B.D. Kingery J.M. Anchin S. Subramaniam D.S. Linthicum 1996 ABGEN: a knowledge-based automated approach for antibody structure modeling Nat. Biotechnol. 14 323 328
25. A.A. Canutescu A.A. Shelenkov R.L. Dunbrack Jr. 2003 A graph-theory algorithm for rapid protein side-chain prediction Protein Sci. 12 2001 2014
26. R.A. Laskowski J.A. Rullmannn M.W. MacArthur R. Kaptein J.M. Thornton 1996 AQUA and PROCHECK-NMR: programs for checking the quality of protein structures solved by NMR J. Biomol. NMR 8 477 486
27. W.B. Arendall III W. Tempel J.S. Richardson W. Zhou S. Wang I.W. Davis Z.J. Liu J.P. Rose W.M. Carson M. Luo D.C. Richardson B.C. Wang 2005 A test of enhancing model accuracy in high-throughput crystallography J. Struct. Funct. Genomics 6 1 11
28. Mandal, C.: MODELYN-a molecular modelling program version PC-1.0, Indian Copyright No. 9/98 (1998)
29. S. Ahmad M. Gromiha H. Fawareh A. Sarai 2004 ASAView: database and tool for solvent accessibility representation in proteins BMC Bioinformatics 5 1471 2105
30. M. Chatterjee V. Sharma C. Mandal S. Sundar S. Sen 1998 Identification of antibodies directed against O-acetylated sialic acids in visceral leishmaniasis: its diagnostic and prognostic role Glycoconj. J. 15 1141 1147
31. A. DiGiandomenico M.J. Matewish A. Bisaillon J.R. Stehle J.S. Lam P. Castric 2002 Glycosylation of Pseudomonas aeruginosa 1244 pilin:glycan substrate specificity Mol. Microbiol. 2 519 530 (Pubitemid 35340961)
32. Y.A. Knirel N.A. Kocharova A.S. Shashkov B.A. Dmitriev N.K. Kochetkov E.S. Stanislavsky G.M. Mashilova 1987 Somatic antigens of Pseudomonas aeruginosa. The structure of O-specific polysaccharide chains of the lipopolysaccharides from P. aeruginosa O5 (Lányi) and immunotype 6 (Fisher) Eur. J. Biochem. 163 639 652
33. D.G. Lee J.M. Urbach G. Wu N.T. Liberati R.L. Feinbaum S. Miyata L.T. Diggins J. He M. Saucier E. Deziel L. Friedman L. Li G. Grills K. Montgomery R. Kucherlapati L.G. Rahme F.M. Ausubel 2006 Genomic analysis reveals that Pseudomonas aeruginosa virulence is combinatorial Genome Biol. 7 R90
34. G. Cacalano M. Kays L. Saiman A. Prince 1992 Production of the Pseudomonas aeruginosa neuraminidase is increased under hyperosmolar conditions and is regulated by genes involved in alginate expression J. Clin. Invest. 89 1866 1874
35. B. Xia G.P. Sachdev R.D. Cummings 2007 Pseudomonas aeruginosa mucoid strain 8830 binds glycans containing the sialyl-Lewis x epitope Glycoconj. J. 24 87 95
36. T. Sipahi B. Tavil A. Oksal 2005 Visceral leishmaniasis and Pseudomonas septicemia associated with hemophagocytic syndrome and myelodysplasia in a Turkish child Turk. J. Pediatr. 47 191 194
37. T. Avril E.R. Wagner H.J. Willison P.R. Crocker 2006 Sialic acid-binding immunoglobulin-like lectin 7 mediates selective recognition of sialylated glycans expressed on Campylobacter jejuni lipooligosaccharides Infect. Immun. 74 4133 4141
38. C. Jones M. Virji P.R. Crocker 2003 Recognition of sialylated meningococcal lipopolysaccharide by Siglecs expressed on myeloid cells leads to enhanced bacterial uptake Mol. Microbiol. 49 1213 1225
39. A.L. Lewis M.E. Hensler A. Varki V. Nizet 2006 The group B streptococcal sialic acid O-acetyl transferase is encoded by neuD, a conserved component of bacterial sialic acid biosynthetic gene clusters J. Biol. Chem. 281 11186 11192
40. A. Sonawane J. Jyot R. Ramphal 2006 Pseudomonas aeruginosa LecB is involved in pilus biogenesis and protease IV activity but not in adhesion to respiratory mucins Infect. Immun. 74 7035 7039