-
1
-
-
25144516786
-
Phylogenetic resolution and habitat specificity of members of the Photobacterium phosphoreum species group
-
Ast, J. C. & Dunlap, P. V. (2005). Phylogenetic resolution and habitat specificity of members of the Photobacterium phosphoreum species group. Environ Microbiol 7, 1641-1654.
-
(2005)
Environ Microbiol
, vol.7
, pp. 1641-1654
-
-
Ast, J.C.1
Dunlap, P.V.2
-
2
-
-
34848912062
-
Photobacterium kishitanii sp. nov., a luminous marine bacterium symbiotic with deep-sea fishes
-
Ast, J. C., Cleenwerck, I., Engelbeen, K., Urbanczyk, H., Thompson, F. L., De Vos, P. & Dunlap, P. V. (2007). Photobacterium kishitanii sp. nov., a luminous marine bacterium symbiotic with deep-sea fishes. Int J Syst Evol Microbiol 57, 2073-2078.
-
(2007)
Int J Syst Evol Microbiol
, vol.57
, pp. 2073-2078
-
-
Ast, J.C.1
Cleenwerck, I.2
Engelbeen, K.3
Urbanczyk, H.4
Thompson, F.L.5
De Vos, P.6
Dunlap, P.V.7
-
3
-
-
10144236089
-
Le Photobacterium luminosum, bacterie lumineuse de la Mer du Nord.
-
Beijerinck, M. W. (1889). Le Photobacterium luminosum, bacterie lumineuse de la Mer du Nord. Arch Neerl Sci Exactes Nat 23, 401-427.
-
(1889)
Arch Neerl Sci Exactes Nat
, vol.23
, pp. 401-427
-
-
Beijerinck, M.W.1
-
4
-
-
0014081373
-
Étude d'un Photobacterium isolé de l'organe lumineux de poissons Leiognathidae.
-
Boisvert, H., Chatelain, R. & Bassot, J. M. (1967). Étude d'un Photobacterium isolé de l'organe lumineux de poissons Leiognathidae. Ann Inst Pasteur (Paris) 112, 520-524.
-
(1967)
Ann Inst Pasteur (Paris)
, vol.112
, pp. 520-524
-
-
Boisvert, H.1
Chatelain, R.2
Bassot, J.M.3
-
5
-
-
67349284233
-
Luminous bacteria
-
Edited by M. M. Dworkin, S. Falkow, E. Rosenberg, K.-H. Schleifer & E. Stackebrandt. New York: Academic Press
-
Dunlap, P. V. & Kita-Tsukamoto, K. (2001). Luminous bacteria. In The Prokaryotes, pp. 863-892. Edited by M. M. Dworkin, S. Falkow, E. Rosenberg, K.-H. Schleifer & E. Stackebrandt. New York: Academic Press.
-
(2001)
The Prokaryotes
, pp. 863-892
-
-
Dunlap, P.V.1
Kita-Tsukamoto, K.2
-
6
-
-
34848912651
-
Phylogenetic analysis of host-symbiont specificity and codivergence in bioluminescent symbioses
-
Dunlap, P. V., Ast, J. C., Kimura, S., Fukui, A., Yoshino, T. & Endo, H. (2007). Phylogenetic analysis of host-symbiont specificity and codivergence in bioluminescent symbioses. Cladistics 23, 507-532.
-
(2007)
Cladistics
, vol.23
, pp. 507-532
-
-
Dunlap, P.V.1
Ast, J.C.2
Kimura, S.3
Fukui, A.4
Yoshino, T.5
Endo, H.6
-
7
-
-
0024358339
-
Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains
-
Ezaki, T., Hashimoto, Y. & Yabuuchi, E. (1989). Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacteriol 39, 224-229.
-
(1989)
Int J Syst Bacteriol
, vol.39
, pp. 224-229
-
-
Ezaki, T.1
Hashimoto, Y.2
Yabuuchi, E.3
-
8
-
-
0000461280
-
Confidence limits on phylogenies: An approach using the bootstrap
-
Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
9
-
-
0019296687
-
A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide-sequences
-
Kimura, M. (1980). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide-sequences. J Mol Evol 16, 111-120.
-
(1980)
J Mol Evol
, vol.16
, pp. 111-120
-
-
Kimura, M.1
-
10
-
-
3242810318
-
MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
-
Kumar, S., Tamura, K. & Nei, M. (2004). MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5, 150-163.
-
(2004)
Brief Bioinform
, vol.5
, pp. 150-163
-
-
Kumar, S.1
Tamura, K.2
Nei, M.3
-
11
-
-
0001857117
-
16S/23S rRNA sequencing
-
Edited by E. Stackebrandt & M. Goodfellow. Chichester: Wiley
-
Lane, D. J. (1991). 16S/23S rRNA sequencing. In Nucleic Acid Techniques in Bacterial Systematics, pp. 115-175. Edited by E. Stackebrandt & M. Goodfellow. Chichester: Wiley.
-
(1991)
Nucleic Acid Techniques in Bacterial Systematics
, pp. 115-175
-
-
Lane, D.J.1
-
12
-
-
85010439719
-
A procedure for the isolation of deoxyribonucleic acid from microorganisms
-
Marmur, J. (1961). A procedure for the isolation of deoxyribonucleic acid from microorganisms. J Mol Biol 3, 208-218.
-
(1961)
J Mol Biol
, vol.3
, pp. 208-218
-
-
Marmur, J.1
-
13
-
-
0000198211
-
Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography
-
Mesbah, M., Premachandran, U. & Whitman, W. B. (1989). Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography. Int J Syst Bacteriol 39, 159-167.
-
(1989)
Int J Syst Bacteriol
, vol.39
, pp. 159-167
-
-
Mesbah, M.1
Premachandran, U.2
Whitman, W.B.3
-
14
-
-
2942522395
-
Application of atomic force microscopy to observation of marine bacteria
-
Nishino, T., Ikemoto, E. & Kogure, K. (2004). Application of atomic force microscopy to observation of marine bacteria. J Oceanogr 60, 219-225.
-
(2004)
J Oceanogr
, vol.60
, pp. 219-225
-
-
Nishino, T.1
Ikemoto, E.2
Kogure, K.3
-
15
-
-
33646186937
-
Photobacterium ganghwense sp nov., a halophilic bacterium isolated from sea water
-
Park, Y. D., Baik, K. S., Seong, C. N., Bae, K. S., Kim, S. & Chun, J. (2006). Photobacterium ganghwense sp nov., a halophilic bacterium isolated from sea water. Int J Syst Evol Microbiol 56, 745-749.
-
(2006)
Int J Syst Evol Microbiol
, vol.56
, pp. 745-749
-
-
Park, Y.D.1
Baik, K.S.2
Seong, C.N.3
Bae, K.S.4
Kim, S.5
Chun, J.6
-
16
-
-
0015760311
-
Taxonomy of marine, luminous bacteria
-
Reichelt, J. L. & Baumann, P. (1973). Taxonomy of marine, luminous bacteria. Arch Mikrobiol 94, 283-330.
-
(1973)
Arch Mikrobiol
, vol.94
, pp. 283-330
-
-
Reichelt, J.L.1
Baumann, P.2
-
17
-
-
0017141052
-
Study of genetic relationships among marine species of genera Beneckea and Photobacterium by means of in vitro DNA-DNA hybridization
-
Reichelt, J. L., Baumann, P. & Baumann, L. (1976). Study of genetic relationships among marine species of genera Beneckea and Photobacterium by means of in vitro DNA-DNA hybridization. Arch Microbiol 110, 101-120.
-
(1976)
Arch Microbiol
, vol.110
, pp. 101-120
-
-
Reichelt, J.L.1
Baumann, P.2
Baumann, L.3
-
18
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
-
(1987)
Mol Biol Evol
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
19
-
-
35648960851
-
Inferring the evolutionary history of vibrios by means of multilocus sequence analysis
-
Sawabe, T., Kita-Tsukamoto, K. & Thompson, F. L. (2007). Inferring the evolutionary history of vibrios by means of multilocus sequence analysis. J Bacteriol 189, 7932-7936.
-
(2007)
J Bacteriol
, vol.189
, pp. 7932-7936
-
-
Sawabe, T.1
Kita-Tsukamoto, K.2
Thompson, F.L.3
-
20
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson, J. D., Higgins, D. G. & Gibson, T. J. (1994). CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22, 4673-4680.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
21
-
-
36549007472
-
Phylogenetic analysis of vibrios and related species by means of atpA gene sequences
-
Thompson, C. C., Thompson, F. L., Vicente, A. C. & Swings, J. (2007a). Phylogenetic analysis of vibrios and related species by means of atpA gene sequences. Int J Syst Evol Microbiol 57, 2480-2484.
-
(2007)
Int J Syst Evol Microbiol
, vol.57
, pp. 2480-2484
-
-
Thompson, C.C.1
Thompson, F.L.2
Vicente, A.C.3
Swings, J.4
-
22
-
-
34447540349
-
Multilocus sequence analysis reveals that Vibrio harveyi and V. campbellii are distinct species
-
Thompson, F. L., Gomez-Gil, B., Vasconcelos, A. T. R. & Sawabe, T. (2007b). Multilocus sequence analysis reveals that Vibrio harveyi and V. campbellii are distinct species. Appl Environ Microbiol 73, 4279-4285.
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 4279-4285
-
-
Thompson, F.L.1
Gomez-Gil, B.2
Vasconcelos, A.T.R.3
Sawabe, T.4
-
23
-
-
70350727832
-
-
Thyssen, A. & Ollevier, F. (2005). Genus Photobacterium. In Bergey's Manual of Systematic Bacteriology, 2nd edn, 2, part B, The Proteobacteria, pp. 546-552. Edited by D. J. Brenner, N. R. Krieg & J. T. Staley. New York: Springer.
-
Thyssen, A. & Ollevier, F. (2005). Genus Photobacterium. In Bergey's Manual of Systematic Bacteriology, 2nd edn, vol. 2, part B, The Proteobacteria, pp. 546-552. Edited by D. J. Brenner, N. R. Krieg & J. T. Staley. New York: Springer.
-
-
-
-
24
-
-
47049083819
-
Phylogenetic analysis of the incidence of lux gene horizontal transfer in Vibrionaceae
-
Urbanczyk, H., Ast, J. C., Kaeding, A. J., Oliver, J. D. & Dunlap, P. V. (2008). Phylogenetic analysis of the incidence of lux gene horizontal transfer in Vibrionaceae. J Bacteriol 190, 3494-3504.
-
(2008)
J Bacteriol
, vol.190
, pp. 3494-3504
-
-
Urbanczyk, H.1
Ast, J.C.2
Kaeding, A.J.3
Oliver, J.D.4
Dunlap, P.V.5
-
25
-
-
33745583856
-
LuxA gene of light organ symbionts of the bioluminescent fish Acropoma japonicum (Acropomatidae) and Siphamia versicolor (Apogonidae) forms a lineage closely related to that of Photobacterium leiognathi ssp. mandapamensis
-
Wada, M., Kamiya, A., Uchiyama, N., Yoshizawa, S., Kita-Tsukamoto, K., Ikejima, K., Yu, R., Imada, C., Karatani, H. & other authors (2006). LuxA gene of light organ symbionts of the bioluminescent fish Acropoma japonicum (Acropomatidae) and Siphamia versicolor (Apogonidae) forms a lineage closely related to that of Photobacterium leiognathi ssp. mandapamensis. FEMS Microbiol Lett 260, 186-192.
-
(2006)
FEMS Microbiol Lett
, vol.260
, pp. 186-192
-
-
Wada, M.1
Kamiya, A.2
Uchiyama, N.3
Yoshizawa, S.4
Kita-Tsukamoto, K.5
Ikejima, K.6
Yu, R.7
Imada, C.8
Karatani, H.9
-
26
-
-
0025904746
-
Development of species-specific hybridization probes for marine luminous bacteria by using in vitro DNA amplification
-
Wimpee, C. F., Nadeau, T. L. & Nealson, K. H. (1991). Development of species-specific hybridization probes for marine luminous bacteria by using in vitro DNA amplification. Appl Environ Microbiol 57, 1319-1324.
-
(1991)
Appl Environ Microbiol
, vol.57
, pp. 1319-1324
-
-
Wimpee, C.F.1
Nadeau, T.L.2
Nealson, K.H.3
-
27
-
-
1042309477
-
Phylogenetic analyses of Lampropedia hyalina based on the 16S rRNA gene sequence
-
Xie, C. H. & Yokota, A. (2003). Phylogenetic analyses of Lampropedia hyalina based on the 16S rRNA gene sequence. J Gen Appl Microbiol 49, 345-349.
-
(2003)
J Gen Appl Microbiol
, vol.49
, pp. 345-349
-
-
Xie, C.H.1
Yokota, A.2
|