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Volumn 56, Issue 4, 2006, Pages 745-749

Photobacterium ganghwense sp. nov., a halophilic bacterium isolated from sea water

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; CATALASE; CYTOSINE; GUANINE; LIPOQUINONE; MONOUNSATURATED FATTY ACID; OXIDOREDUCTASE; QUINONE DERIVATIVE; RNA 16S; SATURATED FATTY ACID; SEA WATER; UNCLASSIFIED DRUG;

EID: 33646186937     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.63811-0     Document Type: Article
Times cited : (44)

References (33)
  • 2
    • 2442703943 scopus 로고    scopus 로고
    • Phylogenetic analysis of the lux operon distinguishes two evolutionarily distinct clades of Photobacterium leiognathi
    • Ast J. C. & Dunlap, P. V. (2004). Phylogenetic analysis of the lux operon distinguishes two evolutionarily distinct clades of Photobacterium leiognathi. Arch Microbiol 181, 352-361.
    • (2004) Arch Microbiol , vol.181 , pp. 352-361
    • Ast, J.C.1    Dunlap, P.V.2
  • 4
    • 10144236089 scopus 로고
    • Le Photobacterium luminosum. Bactérie luminosum de la Mer Nord
    • (in French)
    • Beijerinck, M. W. (1889). Le Photobacterium luminosum. Bactérie luminosum de la Mer Nord. Arch Néerl Sci 23, 401-427 (in French).
    • (1889) Arch Néerl Sci , vol.23 , pp. 401-427
    • Beijerinck, M.W.1
  • 5
    • 0014081373 scopus 로고
    • Etude d'un Photobacterium isolé de l'organe lumineux de poissons Leiognathidae
    • (in French)
    • Boisvert, H., Chatelain, R. & Bassot, J.-M. (1967). Etude d'un Photobacterium isolé de l'organe lumineux de poissons Leiognathidae. Ann Inst Pasteur 112, 520-524 (in French).
    • (1967) Ann Inst Pasteur , vol.112 , pp. 520-524
    • Boisvert, H.1    Chatelain, R.2    Bassot, J.-M.3
  • 6
    • 0028904058 scopus 로고
    • A phylogenetic analysis of the genus Nocardia with 16S rRNA gene sequences
    • Chun, J. & Goodfellow, M. (1995). A phylogenetic analysis of the genus Nocardia with 16S rRNA gene sequences. Int J Syst Bacteriol 45, 240-245.
    • (1995) Int J Syst Bacteriol , vol.45 , pp. 240-245
    • Chun, J.1    Goodfellow, M.2
  • 7
    • 0033803806 scopus 로고    scopus 로고
    • Nocardiopsis kunsanensis sp. nov., a moderately halophilic actinomycete isolated from a saltern
    • Chun, J., Bae, K. S., Moon, E. Y., Jung, S. O., Lee, H. K & Kim, S. J. (2000). Nocardiopsis kunsanensis sp. nov., a moderately halophilic actinomycete isolated from a saltern. Int J Syst Evol Microbiol 50, 1909-1913.
    • (2000) Int J Syst Evol Microbiol , vol.50 , pp. 1909-1913
    • Chun, J.1    Bae, K.S.2    Moon, E.Y.3    Jung, S.O.4    Lee, H.K.5    Kim, S.J.6
  • 8
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 9
    • 0003437299 scopus 로고
    • PHYLIP - Phylogenetic inference package, version 3.5c
    • Distributed by the author. Department of Genome Sciences, University of Washington, Seattle, USA
    • Felsenstein, J. (1993). PHYLIP - phylogenetic inference package, version 3.5c. Distributed by the author. Department of Genome Sciences, University of Washington, Seattle, USA.
    • (1993)
    • Felsenstein, J.1
  • 10
    • 84959747425 scopus 로고
    • Toward defining the course of evolution: Minimum change for a specific tree topology
    • Fitch, W. M. (1971). Toward defining the course of evolution: minimum change for a specific tree topology. Syst Zool 20, 406-416.
    • (1971) Syst Zool , vol.20 , pp. 406-416
    • Fitch, W.M.1
  • 11
    • 0014211361 scopus 로고
    • Construction of phylogenetic trees: A method based on mutation distances as estimated from cytochrome c sequences is of general applicability
    • Fitch, W. M. & Margoliash, E. (1967). Construction of phylogenetic trees: a method based on mutation distances as estimated from cytochrome c sequences is of general applicability. Science 155, 279-284.
    • (1967) Science , vol.155 , pp. 279-284
    • Fitch, W.M.1    Margoliash, E.2
  • 12
    • 0028837032 scopus 로고
    • Small-subunit rRNA sequences and whole DNA relatedness concur for the reassignment of Pasteurella piscicida (Snieszko et al.) Janssen and Surgalla to the genus Photobacterium as Photobacterium damsela subsp. piscicida comb. nov
    • Gauthier, G., Lafay, B., Ruimy, R., Breittmayer, V., Nicolas, J. L., Gauthier, M. & Christen, R. (1995). Small-subunit rRNA sequences and whole DNA relatedness concur for the reassignment of Pasteurella piscicida (Snieszko et al.) Janssen and Surgalla to the genus Photobacterium as Photobacterium damsela subsp. piscicida comb. nov. Int J Syst Bacteriol 45, 139-144.
    • (1995) Int J Syst Bacteriol , vol.45 , pp. 139-144
    • Gauthier, G.1    Lafay, B.2    Ruimy, R.3    Breittmayer, V.4    Nicolas, J.L.5    Gauthier, M.6    Christen, R.7
  • 13
    • 0000732090 scopus 로고
    • Evolution of protein molecules
    • Edited by H. N. Munro. New York: Academic Press
    • Jukes, T. H. & Cantor, C. R. (1969). Evolution of protein molecules. In Mammalian Protein Metabolism, vol. 3, pp. 21-132. Edited by H. N. Munro. New York: Academic Press.
    • (1969) Mammalian Protein Metabolism , vol.3 , pp. 21-132
    • Jukes, T.H.1    Cantor, C.R.2
  • 14
    • 77956800518 scopus 로고
    • Lipids and cell-wall analysis in bacterial systematics
    • Komagata, K. & Suzuki, K. (1987). Lipids and cell-wall analysis in bacterial systematics. Methods Microbiol 19, 161-203.
    • (1987) Methods Microbiol , vol.19 , pp. 161-203
    • Komagata, K.1    Suzuki, K.2
  • 15
    • 36949064696 scopus 로고
    • Identification of Pseudomonas pyocyanea by the oxidase reaction
    • Kovacs, N. (1956). Identification of Pseudomonas pyocyanea by the oxidase reaction. Nature 178, 703.
    • (1956) Nature , vol.178 , pp. 703
    • Kovacs, N.1
  • 16
    • 0001857117 scopus 로고
    • 16S/23S rRNA sequencing
    • Edited by M. Goodfellow. Chichester: Wiley
    • Lane, D. J. (1991). 16S/23S rRNA sequencing. In Nucleic Acid Techniques in Bacterial Systematics, pp. 115-175. Edited by M. Goodfellow. Chichester: Wiley.
    • (1991) Nucleic Acid Techniques in Bacterial Systematics , pp. 115-175
    • Lane, D.J.1
  • 17
    • 0000144963 scopus 로고
    • Composition of sea water
    • Lyman, J. & Fleming, R. H. (1940). Composition of sea water. J Mar Res 3, 134-146.
    • (1940) J Mar Res , vol.3 , pp. 134-146
    • Lyman, J.1    Fleming, R.H.2
  • 18
    • 73649209034 scopus 로고
    • Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature
    • Marmur, J. & Doty, P. (1962). Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature. J Mol Biol 5, 109-118.
    • (1962) J Mol Biol , vol.5 , pp. 109-118
    • Marmur, J.1    Doty, P.2
  • 19
    • 0031671525 scopus 로고    scopus 로고
    • Photobacterium profundum sp. nov., a new, moderately barophilic bacterial species isolated from a deep-sea sediment
    • Nogi, Y., Masui, N. & Kato, C. (1998). Photobacterium profundum sp. nov., a new, moderately barophilic bacterial species isolated from a deep-sea sediment. Extremophiles 2, 1-7.
    • (1998) Extremophiles , vol.2 , pp. 1-7
    • Nogi, Y.1    Masui, N.2    Kato, C.3
  • 20
    • 0028580748 scopus 로고
    • Characterization and identification of two Vibrio species indigenous to the intestine of fish in cold sea water; description of Vibrio iliopiscarius sp. nov
    • Onarheim, A. M., Wiik, R., Burghardt, J. & Stackebrandt E. (1994). Characterization and identification of two Vibrio species indigenous to the intestine of fish in cold sea water; description of Vibrio iliopiscarius sp. nov. Syst Appl Microbiol 17, 370-379.
    • (1994) Syst Appl Microbiol , vol.17 , pp. 370-379
    • Onarheim, A.M.1    Wiik, R.2    Burghardt, J.3    Stackebrandt, E.4
  • 21
    • 0015760311 scopus 로고
    • Taxonomy of the marine, luminous bacteria
    • Reichelt J. L. & Baumann, P. (1973). Taxonomy of the marine, luminous bacteria. Arch Microbiol 94, 283-330.
    • (1973) Arch Microbiol , vol.94 , pp. 283-330
    • Reichelt, J.L.1    Baumann, P.2
  • 22
    • 0017141052 scopus 로고
    • Study of genetic relationships among marine species of the genera Beneckea and Photobacterium
    • Reichelt J. L., Baumann, P. & Baumann, L. (1976). Study of genetic relationships among marine species of the genera Beneckea and Photobacterium. Arch Microbiol 110, 101-120.
    • (1976) Arch Microbiol , vol.110 , pp. 101-120
    • Reichelt, J.L.1    Baumann, P.2    Baumann, L.3
  • 23
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 24
    • 22544453912 scopus 로고    scopus 로고
    • Photobacterium frigidiphilum sp. nov., a psychrophilic, lipolytic bacterium isolated from deep-sea sediments of Edison Seamount
    • Seo, H. J., Bae, S. S., Lee, J. H. & Kim, S. J. (2005). Photobacterium frigidiphilum sp. nov., a psychrophilic, lipolytic bacterium isolated from deep-sea sediments of Edison Seamount. Int J Syst Evol Microbiol 55, 1661-1666.
    • (2005) Int J Syst Evol Microbiol , vol.55 , pp. 1661-1666
    • Seo, H.J.1    Bae, S.S.2    Lee, J.H.3    Kim, S.J.4
  • 25
    • 0000612080 scopus 로고
    • Phenotypic characterization
    • Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology
    • Smibert R. M. & Krieg, N. R. (1994). Phenotypic characterization. In Methods for General and Molecular Microbiology, pp. 611-654. Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology.
    • (1994) Methods for General and Molecular Microbiology , pp. 611-654
    • Smibert, R.M.1    Krieg, N.R.2
  • 26
    • 0025950004 scopus 로고
    • Evaluation of the genus Listonella and reassignment of Listonella damsela (Love et al.) MacDonell and Colwell to the genus Photobacterium as Photobacterium damsela comb. nov. with an emended description
    • Smith, S. K, Sutton, D. C., Fuerst, J. A. & Reichelt, J. L. (1991). Evaluation of the genus Listonella and reassignment of Listonella damsela (Love et al.) MacDonell and Colwell to the genus Photobacterium as Photobacterium damsela comb. nov. with an emended description. Int J Syst Bacteriol 41, 529-534.
    • (1991) Int J Syst Bacteriol , vol.41 , pp. 529-534
    • Smith, S.K.1    Sutton, D.C.2    Fuerst, J.A.3    Reichelt, J.L.4
  • 27
    • 0028028182 scopus 로고
    • Taxonomic note: A place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology
    • Stackebrandt, E. & Goebel, B. M. (1994). Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44, 846-849.
    • (1994) Int J Syst Bacteriol , vol.44 , pp. 846-849
    • Stackebrandt, E.1    Goebel, B.M.2
  • 28
    • 0004248459 scopus 로고    scopus 로고
    • PAUP - Phylogenetic analysis using parsimony, version 4
    • Sunderland, MA: Sinauer Associates
    • Swofford, D. L. (1998). PAUP - phylogenetic analysis using parsimony, version 4. Sunderland, MA: Sinauer Associates.
    • (1998)
    • Swofford, D.L.1
  • 30
    • 0032964546 scopus 로고    scopus 로고
    • Reassessment of the taxonomic position of Vibrio iliopiscarius (Onarheim et al. 1994) and proposal for Photobacterium iliopiscarium comb. nov
    • Urakawa, H., Kita-Tsukamoto, K & Ohwada, K. (1999). Reassessment of the taxonomic position of Vibrio iliopiscarius (Onarheim et al. 1994) and proposal for Photobacterium iliopiscarium comb. nov. Int J Syst Bacteriol 49, 257-260.
    • (1999) Int J Syst Bacteriol , vol.49 , pp. 257-260
    • Urakawa, H.1    Kita-Tsukamoto, K.2    Ohwada, K.3
  • 31
    • 9744235802 scopus 로고    scopus 로고
    • Transfer of Hyphomicrobium indicum to the genus Photobacterium as Photobacterium indicum comb. nov
    • Xie, C.-H. & Yokota, A. (2004). Transfer of Hyphomicrobium indicum to the genus Photobacterium as Photobacterium indicum comb. nov. Int J Syst Evol Microbiol 54, 2113-2116.
    • (2004) Int J Syst Evol Microbiol , vol.54 , pp. 2113-2116
    • Xie, C.-H.1    Yokota, A.2
  • 32
    • 13244251295 scopus 로고    scopus 로고
    • Photobacterium lipolyticum sp. nov., a bacterium with lipolytic activity isolated from the Yellow Sea in Korea
    • Yoon, J.-H., Lee, J.-K, Kim, Y.-O. & Oh, T.-K. (2005). Photobacterium lipolyticum sp. nov., a bacterium with lipolytic activity isolated from the Yellow Sea in Korea. Int J Syst Evol Microbiol 55, 335-339.
    • (2005) Int J Syst Evol Microbiol , vol.55 , pp. 335-339
    • Yoon, J.-H.1    Lee, J.-K.2    Kim, Y.-O.3    Oh, T.-K.4
  • 33
    • 0002685935 scopus 로고
    • Studies on marine bacteria. I. The cultural requirements of heterotrophic aerobes
    • ZoBell, C. E. (1941). Studies on marine bacteria. I. The cultural requirements of heterotrophic aerobes. J Mar Res 4, 42-75.
    • (1941) J Mar Res , vol.4 , pp. 42-75
    • ZoBell, C.E.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.