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Volumn 10, Issue SUPPL. 1, 2009, Pages

Differences in duplication age distributions between human GPCRs and their downstream genes from a network prospective

Author keywords

[No Author keywords available]

Indexed keywords

G PROTEIN COUPLED RECEPTOR;

EID: 67650394364     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-10-S1-S14     Document Type: Conference Paper
Times cited : (7)

References (33)
  • 1
    • 20144366981 scopus 로고    scopus 로고
    • Genome duplication, extinction and vertebrate evolution
    • 10.1016/j.tree.2005.04.008 16701387
    • Donoghue PC Purnell MA Genome duplication, extinction and vertebrate evolution Trends Ecol Evol 2005, 20(6):312-319. 10.1016/ j.tree.2005.04.008 16701387
    • (2005) Trends Ecol Evol , vol.20 , Issue.6 , pp. 312-319
    • Donoghue, P.C.1    Purnell, M.A.2
  • 2
    • 0036613509 scopus 로고    scopus 로고
    • Age distribution of human gene families shows significant roles of both large- and small-scale duplications in vertebrate evolution
    • 10.1038/ng902 12032571
    • Gu X Wang Y Gu J Age distribution of human gene families shows significant roles of both large- and small-scale duplications in vertebrate evolution Nat Genet 2002, 31(2):205-209. 10.1038/ng902 12032571
    • (2002) Nat Genet , vol.31 , Issue.2 , pp. 205-209
    • Gu, X.1    Wang, Y.2    Gu, J.3
  • 5
    • 38849192336 scopus 로고    scopus 로고
    • Modeling protein network evolution under genome duplication and domain shuffling
    • 2245809 17999763 10.1186/1752-0509-1-49
    • Evlampiev K Isambert H Modeling protein network evolution under genome duplication and domain shuffling BMC Syst Biol 2007, 1:49. 2245809 17999763 10.1186/1752-0509-1-49
    • (2007) BMC Syst Biol , vol.1 , pp. 49
    • Evlampiev, K.1    Isambert, H.2
  • 6
    • 48249095913 scopus 로고    scopus 로고
    • Conservation and topology of protein interaction networks under duplication-divergence evolution
    • 2481380 18632555 10.1073/pnas.0804119105
    • Evlampiev K Isambert H Conservation and topology of protein interaction networks under duplication-divergence evolution Proc Natl Acad Sci USA 2008, 105(29):9863-9868. 2481380 18632555 10.1073/pnas.0804119105
    • (2008) Proc Natl Acad Sci USA , vol.105 , Issue.29 , pp. 9863-9868
    • Evlampiev, K.1    Isambert, H.2
  • 7
    • 28244482030 scopus 로고    scopus 로고
    • Gene duplication and the properties of biological networks
    • 1343502 16315107 10.1007/s00239-005-0037-z
    • Hughes AL Friedman R Gene duplication and the properties of biological networks J Mol Evol 2005, 61(6):758-764. 1343502 16315107 10.1007/ s00239-005-0037-z
    • (2005) J Mol Evol , vol.61 , Issue.6 , pp. 758-764
    • Hughes, A.L.1    Friedman, R.2
  • 8
    • 67650443231 scopus 로고    scopus 로고
    • Alternative splicing, gene duplication and connectivity in the genetic interaction network of the nematode worm Caenorhabditis elegans
    • Hughes AL Friedman R Alternative splicing, gene duplication and connectivity in the genetic interaction network of the nematode worm Caenorhabditis elegans Genetica 2007.
    • (2007) Genetica
    • Hughes, A.L.1    Friedman, R.2
  • 9
    • 38049138722 scopus 로고    scopus 로고
    • Positive selection at the protein network periphery: Evaluation in terms of structural constraints and cellular context
    • 2154421 18077332 10.1073/pnas.0710183104
    • Kim PM Korbel JO Gerstein MB Positive selection at the protein network periphery: Evaluation in terms of structural constraints and cellular context Proc Natl Acad Sci USA 2007, 104(51):20274-20279. 2154421 18077332 10.1073/pnas.0710183104
    • (2007) Proc Natl Acad Sci USA , vol.104 , Issue.51 , pp. 20274-20279
    • Kim, P.M.1    Korbel, J.O.2    Gerstein, M.B.3
  • 10
    • 33747754105 scopus 로고    scopus 로고
    • Comprehensive repertoire and phylogenetic analysis of the G protein-coupled receptors in human and mouse
    • 10.1016/j.ygeno.2006.04.001 16753280
    • Bjarnadottir TK Gloriam DE Hellstrand SH Kristiansson H Fredriksson R Schioth HB Comprehensive repertoire and phylogenetic analysis of the G protein-coupled receptors in human and mouse Genomics 2006, 88(3):263-273. 10.1016/j.ygeno.2006.04.001 16753280
    • (2006) Genomics , vol.88 , Issue.3 , pp. 263-273
    • Bjarnadottir, T.K.1    Gloriam, D.E.2    Hellstrand, S.H.3    Kristiansson, H.4    Fredriksson, R.5    Schioth, H.B.6
  • 11
    • 33846474121 scopus 로고    scopus 로고
    • G-protein-coupled receptors and cancer
    • 10.1038/nrc2069 17251915
    • Dorsam RT Gutkind JS G-protein-coupled receptors and cancer Nat Rev Cancer 2007, 7(2):79-94. 10.1038/nrc2069 17251915
    • (2007) Nat Rev Cancer , vol.7 , Issue.2 , pp. 79-94
    • Dorsam, R.T.1    Gutkind, J.S.2
  • 12
    • 0037205055 scopus 로고    scopus 로고
    • G protein pathways
    • 10.1126/science.1071550 12040175
    • Neves SR Ram PT Iyengar R G protein pathways Science 2002, 296(5573):1636-1639. 10.1126/science.1071550 12040175
    • (2002) Science , vol.296 , Issue.5573 , pp. 1636-1639
    • Neves, S.R.1    Ram, P.T.2    Iyengar, R.3
  • 13
    • 2542441623 scopus 로고    scopus 로고
    • Minireview: Diversity and complexity of signaling through peptidergic G protein-coupled receptors
    • 10.1210/en.2004-0052 15044354
    • Rashid AJ O'Dowd BF George SR Minireview: Diversity and complexity of signaling through peptidergic G protein-coupled receptors Endocrinology 2004, 145(6):2645-2652. 10.1210/en.2004-0052 15044354
    • (2004) Endocrinology , vol.145 , Issue.6 , pp. 2645-2652
    • Rashid, A.J.1    O'Dowd, B.F.2    George, S.R.3
  • 14
    • 0038024615 scopus 로고    scopus 로고
    • The G-protein-coupled receptors in the human genome form five main families Phylogenetic analysis, paralogon groups, and fingerprints
    • 10.1124/mol.63.6.1256 12761335
    • Fredriksson R Lagerstrom MC Lundin LG Schioth HB The G-protein-coupled receptors in the human genome form five main families. Phylogenetic analysis, paralogon groups, and fingerprints Mol Pharmacol 2003, 63(6):1256-1272. 10.1124/mol.63.6.1256 12761335
    • (2003) Mol Pharmacol , vol.63 , Issue.6 , pp. 1256-1272
    • Fredriksson, R.1    Lagerstrom, M.C.2    Lundin, L.G.3    Schioth, H.B.4
  • 15
    • 0036189809 scopus 로고    scopus 로고
    • G protein-coupled receptor signalling and cross-talk: Achieving rapidity and specificity
    • 10.1016/S0898-6568(01)00258-3 11882384
    • Hur EM Kim KT G protein-coupled receptor signalling and cross-talk: achieving rapidity and specificity Cell Signal 2002, 14(5):397-405. 10.1016/S0898-6568(01)00258-3 11882384
    • (2002) Cell Signal , vol.14 , Issue.5 , pp. 397-405
    • Hur, E.M.1    Kim, K.T.2
  • 16
    • 40249098860 scopus 로고    scopus 로고
    • Extensive gains and losses of olfactory receptor genes in Mammalian evolution
    • 1933591 17684554 10.1371/journal.pone.0000708
    • Niimura Y Nei M Extensive gains and losses of olfactory receptor genes in Mammalian evolution PLoS ONE 2007, 2(1):e708. 1933591 17684554 10.1371/journal.pone.0000708
    • (2007) PLoS ONE , vol.2 , Issue.1
    • Niimura, Y.1    Nei, M.2
  • 17
    • 0036563013 scopus 로고    scopus 로고
    • The Wilhelmine E. Key 2001 Invitational Lecture. Estimation of divergence times for a few mammalian and several primate species
    • 10.1093/jhered/93.3.157 12195029
    • Nei M Glazko GV The Wilhelmine E. Key 2001 Invitational Lecture. Estimation of divergence times for a few mammalian and several primate species J Hered 2002, 93(3):157-164. 10.1093/jhered/93.3.157 12195029
    • (2002) J Hered , vol.93 , Issue.3 , pp. 157-164
    • Nei, M.1    Glazko, G.V.2
  • 18
    • 0029100727 scopus 로고
    • Phylogenetic test of the molecular clock and linearized trees
    • 7476128
    • Takezaki N Rzhetsky A Nei M Phylogenetic test of the molecular clock and linearized trees Mol Biol Evol 1995, 12(5):823-833. 7476128
    • (1995) Mol Biol Evol , vol.12 , Issue.5 , pp. 823-833
    • Takezaki, N.1    Rzhetsky, A.2    Nei, M.3
  • 19
    • 44849125522 scopus 로고    scopus 로고
    • GPCR genes are preferentially retained after whole genome duplication
    • 2270905 18382678 10.1371/journal.pone.0001903
    • Semyonov J Park JI Chang CL Hsu SY GPCR genes are preferentially retained after whole genome duplication PLoS ONE 2008, 3(4):e1903. 2270905 18382678 10.1371/journal.pone.0001903
    • (2008) PLoS ONE , vol.3 , Issue.4
    • Semyonov, J.1    Park, J.I.2    Chang, C.L.3    Hsu, S.Y.4
  • 21
    • 0242384751 scopus 로고    scopus 로고
    • Natural history and functional divergence of protein tyrosine kinases
    • 10.1016/S0378-1119(03)00696-6 14604791
    • Gu J Gu X Natural history and functional divergence of protein tyrosine kinases Gene 2003, 317(1-2):49-57. 10.1016/S0378-1119(03)00696-6 14604791
    • (2003) Gene , vol.317 , Issue.1-2 , pp. 49-57
    • Gu, J.1    Gu, X.2
  • 22
    • 85047698990 scopus 로고    scopus 로고
    • Evolutionary patterns of gene families generated in the early stage of vertebrates
    • 10903375
    • Wang Y Gu X Evolutionary patterns of gene families generated in the early stage of vertebrates J Mol Evol 2000, 51(1):88-96. 10903375
    • (2000) J Mol Evol , vol.51 , Issue.1 , pp. 88-96
    • Wang, Y.1    Gu, X.2
  • 23
    • 67749140260 scopus 로고    scopus 로고
    • Functional divergence after the gene duplication and sequence-structure relationship: A case-study of G-protein alpha subunits
    • 10.1002/jez.b.21085
    • Zheng Y Xu D Gu X Functional divergence after the gene duplication and sequence-structure relationship: A case-study of G-protein alpha subunits J Expl Zool B (Mol Dev Evol) 2006, 306B:1-12. 10.1002/ jez.b.21085
    • (2006) J Expl Zool B (Mol Dev Evol) , vol.306 B , pp. 1-12
    • Zheng, Y.1    Xu, D.2    Gu, X.3
  • 24
    • 34548534411 scopus 로고    scopus 로고
    • Evolutionary analysis for functional divergence of Toll-like receptor gene family and altered functional constraints
    • 10.1007/s00239-005-0008-4 17762905
    • Zhou H Gu J Lamont SJ Gu X Evolutionary analysis for functional divergence of Toll-like receptor gene family and altered functional constraints J Mol Evol 2007, 65:119-123. 10.1007/s00239-005-0008-4 17762905
    • (2007) J Mol Evol , vol.65 , pp. 119-123
    • Zhou, H.1    Gu, J.2    Lamont, S.J.3    Gu, X.4
  • 25
    • 32044443159 scopus 로고    scopus 로고
    • Evolution of Alternative Splicing after Gene Duplications
    • 1361713 16365379 10.1101/gr.4197006
    • Su Z Wang J Yu J Huang X Gu X Evolution of Alternative Splicing after Gene Duplications Genome Research 2006, 16:182-189. 1361713 16365379 10.1101/gr.4197006
    • (2006) Genome Research , vol.16 , pp. 182-189
    • Su, Z.1    Wang, J.2    Yu, J.3    Huang, X.4    Gu, X.5
  • 26
    • 33847252531 scopus 로고    scopus 로고
    • Tissue-driven hypothesis of genomic evolution and sequence-expression correlations
    • 1815258 17301236 10.1073/pnas.0610797104
    • Gu X Su Z Tissue-driven hypothesis of genomic evolution and sequence-expression correlations PNAS 2007, 104:2779-2784. 1815258 17301236 10.1073/pnas.0610797104
    • (2007) PNAS , vol.104 , pp. 2779-2784
    • Gu, X.1    Su, Z.2
  • 27
    • 34249035859 scopus 로고    scopus 로고
    • Evolutionary framework for protein sequence evolution and gene pleiotropy
    • 1855142 17277368 10.1534/genetics.106.066530
    • Gu X Evolutionary framework for protein sequence evolution and gene pleiotropy Genetics 2007, 175:1813-1822. 1855142 17277368 10.1534/ genetics.106.066530
    • (2007) Genetics , vol.175 , pp. 1813-1822
    • Gu, X.1
  • 28
    • 65249156953 scopus 로고    scopus 로고
    • An evolutionary model for the origin of modularity in a complex gene network
    • 10.1002/jez.b.21249
    • Gu X An evolutionary model for the origin of modularity in a complex gene network J Expl Zool B (Mol Dev Evol) 2009, 312B:75-82. 10.1002/ jez.b.21249
    • (2009) J Expl Zool B (Mol Dev Evol) , vol.312 B , pp. 75-82
    • Gu, X.1
  • 29
    • 0028247213 scopus 로고
    • HOVERGEN: A database of homologous vertebrate genes
    • 523695 8036164 10.1093/nar/22.12.2360
    • Duret L Mouchiroud D Gouy M HOVERGEN: A database of homologous vertebrate genes Nucleic Acids Res 1994, 22(12):2360-2365. 523695 8036164 10.1093/nar/22.12.2360
    • (1994) Nucleic Acids Res , vol.22 , Issue.12 , pp. 2360-2365
    • Duret, L.1    Mouchiroud, D.2    Gouy, M.3
  • 32
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • 147148 9396791 10.1093/nar/25.24.4876
    • Thompson JD Gibson TJ Plewniak F Jeanmougin F Higgins DG The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools Nucleic Acids Res 1997, 25(24):4876-4882. 147148 9396791 10.1093/nar/25.24.4876
    • (1997) Nucleic Acids Res , vol.25 , Issue.24 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 33
    • 0036139211 scopus 로고    scopus 로고
    • MEGA2: Molecular evolutionary genetics analysis software
    • 10.1093/bioinformatics/17.12.1244 11751241
    • Kumar S Tamura K Jakobsen IB Nei M MEGA2: Molecular evolutionary genetics analysis software Bioinformatics 2001, 17(12):1244-1245. 10.1093/bioinformatics/17.12.1244 11751241
    • (2001) Bioinformatics , vol.17 , Issue.12 , pp. 1244-1245
    • Kumar, S.1    Tamura, K.2    Jakobsen, I.B.3    Nei, M.4


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