-
1
-
-
0028003924
-
+ T cells in cancer immunotherapy
-
DOI 10.1016/0952-7915(94)90078-7
-
Topalian, S. L. (1994) MHC class II restricted tumor antigens and the role of CD4+ T-cells in cancer immunotherapy. Curr. Opin. Immunol. 6, 741-745. (Pubitemid 24312142)
-
(1994)
Current Opinion in Immunology
, vol.6
, Issue.5
, pp. 741-745
-
-
Topalian, S.L.1
-
2
-
-
0032055915
-
Several common HLA-DR types share largely overlapping peptide binding repertoires
-
Southwood, S., Sidney, J., Kondo, A., del Guercio, M. F., Appella, E., Hoffman, S., Kubo, R. T., Chesnut, R. W., Grey, H. M., and Sette, A. (1998) Several common HLA-DR types share largely overlapping peptide binding repertoires. J. Immunol. 160, 3363-3373. (Pubitemid 28164729)
-
(1998)
Journal of Immunology
, vol.160
, Issue.7
, pp. 3363-3373
-
-
Southwood, S.1
Sidney, J.2
Kondo, A.3
Del Guercio, M.-F.4
Appella, E.5
Hoffman, S.6
Kubo, R.T.7
Chesnut, R.W.8
Grey, H.M.9
Sette, A.10
-
3
-
-
0028137641
-
Defining rules for the peptide-MHC class II interaction
-
DOI 10.1016/0952-7915(94)90033-7
-
Sinigaglia, F. and Hammer, J. (1994) Defining rules for the peptide-MHC class II interaction. Curr. Opin. Immunol. 6, 52-56. (Pubitemid 24050705)
-
(1994)
Current Opinion in Immunology
, vol.6
, Issue.1
, pp. 52-56
-
-
Sinigaglia, F.1
-
4
-
-
0024362181
-
Capacity of intact proteins to bind to MHC class II molecules
-
Sette, A., Adorini, L., Colon, S. M., Buus, S., and Grey, H. M. (1989) Capacity of intact proteins to bind to MHC class II molecules. J. Immunol. 143, 1265-1267. (Pubitemid 19211358)
-
(1989)
Journal of Immunology
, vol.143
, Issue.4
, pp. 1265-1267
-
-
Sette, A.1
Adorini, L.2
Colon, S.M.3
Buus, S.4
Grey, H.M.5
-
5
-
-
0028348369
-
Crystal structure of the human class II MHC protein HLA-DR1 complexed with an influenza virus peptide
-
DOI 10.1038/368215a0
-
Stern, L. J., Brown, J. H., Jardetzky, T. S., Gorga, J. C., Urban, R. G., Strominger, J. L., and Wiley, D. C. (1994) Crystal structure of the human class II MHC protein HLA-DR1 complexed with an influenza virus peptide. Nature 368, 215-221. (Pubitemid 24108837)
-
(1994)
Nature
, vol.368
, Issue.6468
, pp. 215-221
-
-
Stern, L.J.1
Brown, J.H.2
Jardetzky, T.S.3
Gorga, J.C.4
Urban, R.G.5
Strominger, J.L.6
Wiley, D.C.7
-
6
-
-
0141832121
-
MHC-guided processing: Binding of large antigen fragments
-
Sercarz, E. E. and Maverakis, E. (2003) Mhcguided processing: binding of large antigen fragments. Nat. Rev. Immunol. 3, 621-629. (Pubitemid 37328665)
-
(2003)
Nature Reviews Immunology
, vol.3
, Issue.8
, pp. 621-629
-
-
Sercarz, E.E.1
Maverakis, E.2
-
7
-
-
0031041759
-
Binding analysis of 95 HIV gp120 peptides to HLA-DR1101 and -DR0401 evidenced many HLA-class II binding regions on gp120 and suggested several promiscuous regions
-
Gaudebout, P., Zeliszewski, D., Golvano, J. J., Pignal, C., Le Gac, S., Borras-Cuesta, F., and Sterkers, G. (1997) Binding analysis of 95 HIV gp120 peptides to HLA-DR1101 and -DR0401 evidenced many HLA-class II binding regions on gp120 and suggested several promiscuous regions. J. Acquir. Immune Defic. Syndr. Hum. Retrovirol. 14, 91-101.
-
(1997)
J. Acquir. Immune Defic. Syndr. Hum. Retrovirol.
, vol.14
, pp. 91-101
-
-
Gaudebout, P.1
Zeliszewski, D.2
Golvano, J.J.3
Pignal, C.4
Le Gac, S.5
Borras-Cuesta, F.6
Sterkers, G.7
-
8
-
-
0034665130
-
Defining promiscuous MHC class II helper T-cell epitopes for the HER2/neu tumor antigen
-
Kobayashi, H., Wood, M., Song, Y., Appella, E., and Celis, E. (2000) Defining promiscuous MHC class II helper T-cell epitopes for the HER2/neu tumor antigen. Cancer Res. 60, 5228-5236.
-
(2000)
Cancer Res.
, vol.60
, pp. 5228-5236
-
-
Kobayashi, H.1
Wood, M.2
Song, Y.3
Appella, E.4
Celis, E.5
-
9
-
-
0024796883
-
Universally immunogenic T cell epitopes: Promiscuous binding to human MHC class II and promiscuous recognition by T cells
-
DOI 10.1002/eji.1830191209
-
Panina-Bordignon, P., Tan, A., Termijtelen, A., Demotz, S., Corradin, G., and Lanzavecchia, A. (1989) Universally immunogenic T-cell epitopes: promiscuous binding to human MHC class II and promiscuous recognition by T-cells. Eur. J. Immunol. 19, 2237-2242. (Pubitemid 20024747)
-
(1989)
European Journal of Immunology
, vol.19
, Issue.12
, pp. 2237-2242
-
-
Panina-Bordignon, P.1
Tan, A.2
Termijtelen, A.3
Demotz, S.4
Corradin, G.5
Lanzavecchia, A.6
-
10
-
-
0024204050
-
A malaria T-cell epitope recognized in association with most mouse and human MHC class II molecules
-
DOI 10.1038/336778a0
-
Sinigaglia, F., Guttinger, M., Kilgus, J., Doran, D. M., Matile, H., Etlinger, H., Trzeciak, A., Gillessen, D., and Pink, J. R. (1988) A malaria T-cell epitope recognized in association with most mouse and human MHC class II molecules. Nature 336, 778-780. (Pubitemid 19014438)
-
(1988)
Nature
, vol.336
, Issue.6201
, pp. 778-780
-
-
Sinigaglia, F.1
Guttinger, M.2
Kilgus, J.3
Doran, D.M.4
Matile, H.5
Etlinger, H.6
Trzeciak, A.7
Gillessen, D.8
Pink, J.R.L.9
-
11
-
-
0027185153
-
Promiscuous and allele-specific anchors in HLA-DR-binding peptides
-
DOI 10.1016/0092-8674(93)90306-B
-
Hammer, J., Valsasnini, P., Tolba, K., Bolin, D., Higelin, J., Takacs, B., and Sinigaglia, F. (1993) Promiscuous and allele-specific anchors in HLA-DR-binding peptides. Cell 74, 197-203. (Pubitemid 23219890)
-
(1993)
Cell
, vol.74
, Issue.1
, pp. 197-203
-
-
Hammer, J.1
Valsasnini, P.2
Tolba, K.3
Bolin, D.4
Higelin, J.5
Takacs, B.6
Sinigaglia, F.7
-
12
-
-
0026706746
-
Identification of a motif for HLA-DR1 binding peptides using M13 display libraries
-
Hammer, J., Takacs, B., and Sinigaglia, F. (1992) Identification of a motif for HLA-DR1 binding peptides using M13 display libraries. J. Exp. Med. 176, 1007-1013.
-
(1992)
J. Exp. Med.
, vol.176
, pp. 1007-1013
-
-
Hammer, J.1
Takacs, B.2
Sinigaglia, F.3
-
13
-
-
10744220502
-
Crystal structure of HLA-DQ0602 that protects against type 1 diabetes and confers strong susceptibility to narcolepsy
-
DOI 10.1073/pnas.0308458100
-
Siebold, C., Hansen, B. E., Wyer, J. R., Harlos, K., Esnouf, R. E., Svejgaard, A., Bell, J. I., Strominger, J. L., Jones, E. Y., and Fugger, L. (2004) Crystal structure of HLA-DQ0602 that protects against type 1 diabetes and confers strong susceptibility to narcolepsy. Proc. Natl. Acad. Sci. U. S. A. 101, 1999-2004. (Pubitemid 38229004)
-
(2004)
Proceedings of the National Academy of Sciences of the United States of America
, vol.101
, Issue.7
, pp. 1999-2004
-
-
Siebold, C.1
Hansen, B.E.2
Wyer, J.R.3
Harlos, K.4
Esnouf, R.E.5
Svejgaard, A.6
Bell, J.I.7
Strominger, J.L.8
Jones, E.Y.9
Fugger, L.10
-
14
-
-
13244283455
-
Glycan side chains on naturally presented MHC class II ligands
-
DOI 10.1002/jms.780
-
Dengjel, J., Rammensee, H. G., and Stevanovic, S. (2005) Glycan side chains on naturally presented MHC class II ligands. J. Mass Spectrom. 40, 100-104. (Pubitemid 40188986)
-
(2005)
Journal of Mass Spectrometry
, vol.40
, Issue.1
, pp. 100-104
-
-
Dengjel, J.1
Rammensee, H.-G.2
Stevanovic, S.3
-
15
-
-
36049028941
-
Identification of HLA-DR-bound peptides presented by human bronchoalveolar lavage cells in sarcoidosis
-
DOI 10.1172/JCI32401
-
Wahlstrom, J., Dengjel, J., Persson, B., Duyar, H., Rammensee, H. G., Stevanovic, S., Eklund, A., Weissert, R., and Grunewald, J. (2007) Identification of HLA-DR-bound peptides presented by human bronchoalveolar lavage cells in sarcoidosis. J. Clin. Invest. 117, 3576-3582. (Pubitemid 350097012)
-
(2007)
Journal of Clinical Investigation
, vol.117
, Issue.11
, pp. 3576-3582
-
-
Wahlstrom, J.1
Dengjel, J.2
Persson, B.3
Duyar, H.4
Rammensee, H.-G.5
Stevanovic, S.6
Eklund, A.7
Weissert, R.8
Grunewald, J.9
-
16
-
-
18844472871
-
T-lymphocyte epitope identification and their use in vaccine development for HIV-1
-
Newman, M. J., Livingston, B., McKinney, D. M., Chesnut, R. W., and Sette, A. (2002) T-lymphocyte epitope identification and their use in vaccine development for HIV-1. Front. Biosci. 7, d1503-d1515.
-
(2002)
Front. Biosci.
, vol.7
-
-
Newman, M.J.1
Livingston, B.2
McKinney, D.M.3
Chesnut, R.W.4
Sette, A.5
-
17
-
-
0343209038
-
Relative contribution of 'determinant selection' and 'holes in the T-cell repertoire' to T-cell responses
-
Schaeffer, E. B., Sette, A., Johnson, D. L., Bekoff, M. C., Smith, J. A., Grey, H. M., and Buus, S. (1989) Relative contribution of "determinant selection" and "holes in the T-cell repertoire" to T-cell responses. Proc. Natl. Acad. Sci. U. S. A. 86, 4649-4653. (Pubitemid 19164607)
-
(1989)
Proceedings of the National Academy of Sciences of the United States of America
, vol.86
, Issue.12
, pp. 4649-4653
-
-
Schaeffer, E.B.1
Sette, A.2
Johnson, D.L.3
Bekoff, M.C.4
Smith, J.A.5
Grey, H.M.6
Buus, S.7
-
18
-
-
0026587503
-
Chemistry of peptide interactions with MHC proteins
-
Sette, A. and Grey, H. M. (1992) Chemistry of peptide interactions with MHC proteins. Curr. Opin. Immunol. 4, 79-86.
-
(1992)
Curr. Opin. Immunol.
, vol.4
, pp. 79-86
-
-
Sette, A.1
Grey, H.M.2
-
19
-
-
0035152281
-
Identification of novel HLA-A2-restricted human immunodeficiency virus type 1-specific cytotoxic T-lymphocyte epitopes predicted by the HLA-A2 supertype peptide-binding motif
-
DOI 10.1128/JVI.75.3.1301-1311.2001
-
Altfeld, M. A., Livingston, B., Reshamwala, N., Nguyen, P. T., Addo, M. M., Shea, A., Newman, M., Fikes, J., Sidney, J., Wentworth, P., Chesnut, R., Eldridge, R. L., Rosenberg, E. S., Robbins, G. K., Brander, C., Sax, P. E., Boswell, S., Flynn, T., Buchbinder, S., Goulder, P. J., Walker, B. D., Sette, A., and Kalams, S. A. (2001) Identification of novel HLA-A2-restricted human immunodeficiency virus type 1-specific cytotoxic T-lymphocyte epitopes predicted by the HLA-A2 supertype peptide-binding motif. J. Virol. 75, 1301-1311. (Pubitemid 32094689)
-
(2001)
Journal of Virology
, vol.75
, Issue.3
, pp. 1301-1311
-
-
Altfeld, M.A.1
Livingston, B.2
Reshamwala, N.3
Nguyen, P.T.4
Addo, M.M.5
Shea, A.6
Newman, M.7
Fikes, J.8
Sidney, J.9
Wentworth, P.10
Chesnut, R.11
Eldridge, R.L.12
Rosenberg, E.S.13
Robbins, G.K.14
Brander, C.15
Sax, P.E.16
Boswell, S.17
Flynn, T.18
Buchbinder, S.19
Goulder, P.J.R.20
Walker, B.D.21
Sette, A.22
Kalams, S.A.23
more..
-
20
-
-
34250635170
-
Methods and protocols for prediction of immunogenic epitopes
-
DOI 10.1093/bib/bbl038
-
Tong, J. C., Tan, T. W., and Ranganathan, S. (2007) Methods and protocols for prediction of immunogenic epitopes. Brief. Bioinform. 8, 96-108. (Pubitemid 47072260)
-
(2007)
Briefings in Bioinformatics
, vol.8
, Issue.2
, pp. 96-108
-
-
Tong, J.C.1
Tan, T.W.2
Ranganathan, S.3
-
21
-
-
33745593748
-
Improving MHC binding peptide prediction by incorporating binding data of auxiliary MHC molecules
-
DOI 10.1093/bioinformatics/btl141
-
Zhu, S., Udaka, K., Sidney, J., Sette, A., Aoki-Kinoshita, K. F., and Mamitsuka, H. (2006) Improving MHC binding peptide prediction by incorporating binding data of auxiliary MHC molecules. Bioinformatics 22, 1648-1655. (Pubitemid 43985299)
-
(2006)
Bioinformatics
, vol.22
, Issue.13
, pp. 1648-1655
-
-
Zhu, S.1
Udaka, K.2
Sidney, J.3
Sette, A.4
Aoki-Kinoshita, K.F.5
Mamitsuka, H.6
-
22
-
-
33845790971
-
A modular concept of HLA for comprehensive peptide binding prediction
-
DOI 10.1007/s00251-006-0176-4
-
DeLuca, D. S., Khattab, B., and Blasczyk, R. (2007) A modular concept of HLA for comprehensive peptide binding prediction. Immunogenetics 59, 25-35. (Pubitemid 46011189)
-
(2007)
Immunogenetics
, vol.59
, Issue.1
, pp. 25-35
-
-
DeLuca, D.S.1
Khattab, B.2
Blasczyk, R.3
-
23
-
-
0041833388
-
A consensus strategy for combining HLA-DR binding algorithms
-
DOI 10.1016/S0198-8859(03)00142-3
-
Mallios, R. R. (2003) A consensus strategy for combining HLA-DR binding algorithms. Hum. Immunol. 64, 852-856. (Pubitemid 37093455)
-
(2003)
Human Immunology
, vol.64
, Issue.9
, pp. 852-856
-
-
Mallios, R.R.1
-
24
-
-
0033392612
-
+ T cells proliferating in response to influenza A antigen
-
Novak, E. J., Liu, A. W., Nepom, G. T., and Kwok, W. W. (1999) MHC class II tetramers identify peptide-specific human CD4(+) T-cells proliferating in response to influenza A antigen. J. Clin. Invest. 104, R63-R67. (Pubitemid 30053194)
-
(1999)
Journal of Clinical Investigation
, vol.104
, Issue.12
-
-
Novak, E.J.1
Liu, A.W.2
Nepom, G.T.3
Kwok, W.W.4
-
25
-
-
2542458242
-
+ T cells in healthy volunteers
-
DOI 10.1016/j.humimm.2004.02.019, PII S0198885904000552
-
Ye, M., Kasey, S., Khurana, S., Nguyen, N. T., Schubert, S., Nugent, C. T., Kuus-Reichel, K., and Hampl, J. (2004) MHC class II tetramers containing influenza hemagglutinin and EBV EBNA1 epitopes detect reliably specific CD4(+) T-cells in healthy volunteers. Hum. Immunol. 65, 507-513. (Pubitemid 38686775)
-
(2004)
Human Immunology
, vol.65
, Issue.5
, pp. 507-513
-
-
Ye, M.1
Kasey, S.2
Khurana, S.3
Nguyen, N.T.4
Schubert, S.5
Nugent, C.T.6
Kuus-Reichel, K.7
Hampl, J.8
-
26
-
-
35548964148
-
Validation of peptide epitope microarray experiments and extraction of quality data
-
DOI 10.1016/j.jim.2007.07.015, PII S0022175907002232
-
Nahtman, T., Jernberg, A., Mahdavifar, S., Zerweck, J., Schutkowski, M., Maeurer, M., and Reilly, M. (2007) Validation of peptide epitope microarray experiments and extraction of quality data. J. Immunol. Methods 328, 1-13. (Pubitemid 350007612)
-
(2007)
Journal of Immunological Methods
, vol.328
, Issue.1-2
, pp. 1-13
-
-
Nahtman, T.1
Jernberg, A.2
Mahdavifar, S.3
Zerweck, J.4
Schutkowski, M.5
Maeurer, M.6
Reilly, M.7
|