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Volumn 101, Issue 3, 2009, Pages 329-339

Pleospora species with Stemphylium anamorphs: A four locus phylogeny resolves new lineages yet does not distinguish among species in the Pleospora herbarum clade

Author keywords

Ascomycota; Conflict; Fungi; Genealogical concordance phylogenetic species recognition; Morphological species concept; Phylogenetic species concept; Species delimitation

Indexed keywords

CLADISTICS; COTTON; DNA; FUNGAL DISEASE; FUNGUS; GENE EXPRESSION; MORPHOLOGY; NEW SPECIES; PATHOGEN; PHYLOGENY; SPECIES CONCEPT; TYPE SPECIMEN;

EID: 67650273045     PISSN: 00275514     EISSN: 15572536     Source Type: Journal    
DOI: 10.3852/08-071     Document Type: Article
Times cited : (63)

References (50)
  • 1
    • 0038452862 scopus 로고
    • Stemphylium leaf spot of China Aster
    • Baker KF, Davis LH. 1950. Stemphylium leaf spot of China Aster. Mycologia 42:477-486.
    • (1950) Mycologia , vol.42 , pp. 477-486
    • Baker, K.F.1    Davis, L.H.2
  • 2
    • 0034326362 scopus 로고    scopus 로고
    • Analysis of canonical and non-canonical splice sites in mammalian genomes
    • Burset M, Seledtsov IA, Solovyev VV. 2000. Analysis of canonical and non-canonical splice sites in mammalian genomes. Nucleic Acid Res 28(21):4364-4375.
    • (2000) Nucleic Acid Res , vol.28 , Issue.21 , pp. 4364-4375
    • Burset, M.1    Seledtsov, I.A.2    Solovyev, V.V.3
  • 3
    • 0036329404 scopus 로고    scopus 로고
    • Phylogeny of Stemphylium spp. based on ITS and glyceraldehyde-3-phosphate dehydrogenase gene sequences
    • Câmara MPS, O'Neill NR, van Berkum P. 2002. Phylogeny of Stemphylium spp. based on ITS and glyceraldehyde-3-phosphate dehydrogenase gene sequences. Mycologia 94:660-672.
    • (2002) Mycologia , vol.94 , pp. 660-672
    • Câmara, M.P.S.1    O'Neill, N.R.2    van Berkum, P.3
  • 4
    • 67650788257 scopus 로고
    • Macrosporium sarcinaeforme Cav. Nuovo parassita del trifoglio
    • Cavara F. 1890. Macrosporium sarcinaeforme Cav. Nuovo parassita del trifoglio. Difesa Parassiti 4:3-8.
    • (1890) Difesa Parassiti , vol.4 , pp. 3-8
    • Cavara, F.1
  • 5
    • 0009849616 scopus 로고
    • Molecular genetic relationships of five Stemphylium species pathogenic to alfalfa
    • Chaisrisook C, Skinner DZ, Stuteville DL. 1995. Molecular genetic relationships of five Stemphylium species pathogenic to alfalfa. Sydowia 47:1-9.
    • (1995) Sydowia , vol.47 , pp. 1-9
    • Chaisrisook, C.1    Skinner, D.Z.2    Stuteville, D.L.3
  • 6
    • 0028988998 scopus 로고
    • Elongation factor 1α, translation and the cytoskeleton
    • Condeelis J. 1995. Elongation factor 1α, translation and the cytoskeleton. Trend Biochem Sc 20:169-170.
    • (1995) Trend Biochem Sc , vol.20 , pp. 169-170
    • Condeelis, J.1
  • 8
    • 0003818581 scopus 로고
    • Über die heterogene Ascomycetengattung Pleospora Rabenh
    • Doctoral dissertation, Zürich, Switzerland: Eidgenös-sische Technische Hochschule. 213 p
    • Crivelli PG. 1983. Über die heterogene Ascomycetengattung Pleospora Rabenh.; Vorschlag für eine Aufteilung [Doctoral dissertation]. Zürich, Switzerland: Eidgenös-sische Technische Hochschule. 213 p.
    • (1983) Vorschlag für eine Aufteilung
    • Crivelli, P.G.1
  • 9
    • 33646589012 scopus 로고    scopus 로고
    • Partition of the Botrytis cinerea complex in France using multiple gene genealogies
    • Fournier E, Giraud T, Albertini C, Brygoo Y. 2005. Partition of the Botrytis cinerea complex in France using multiple gene genealogies. Mycologia 97:1251-1267.
    • (2005) Mycologia , vol.97 , pp. 1251-1267
    • Fournier, E.1    Giraud, T.2    Albertini, C.3    Brygoo, Y.4
  • 10
    • 0031940433 scopus 로고    scopus 로고
    • Cryptic speciation and recombination in the aflatoxin-producing fungus Aspergillus flavus
    • Geiser DM, Pitt JI, Taylor JW. 1998. Cryptic speciation and recombination in the aflatoxin-producing fungus Aspergillus flavus. Proc Nat Acad Sc USA 95:388-393.
    • (1998) Proc Nat Acad Sc USA , vol.95 , pp. 388-393
    • Geiser, D.M.1    Pitt, J.I.2    Taylor, J.W.3
  • 11
    • 0006284341 scopus 로고
    • Stemphylium leaf spot
    • Stuteville DL, Erwin DC, eds, St Paul, Minnesota: APS Press. p
    • Gilchrist DG. 1990. Stemphylium leaf spot. In: Stuteville DL, Erwin DC, eds. Compendium of alfalfa diseases. St Paul, Minnesota: APS Press. p 17-20.
    • (1990) Compendium of alfalfa diseases , pp. 17-20
    • Gilchrist, D.G.1
  • 12
    • 0009819520 scopus 로고
    • A disease of birdsfoot trefoil caused by a new species of Stemphylium
    • Graham JH. 1953. A disease of birdsfoot trefoil caused by a new species of Stemphylium. Phytopathology 43:577- 579.
    • (1953) Phytopathology , vol.43 , pp. 577-579
    • Graham, J.H.1
  • 13
    • 0038514462 scopus 로고
    • A Stemphylium disease of Ladino white clover
    • -. 1957. A Stemphylium disease of Ladino white clover. Phytopathology 47:213-215.
    • (1957) Phytopathology , vol.47 , pp. 213-215
    • Graham, J.H.1
  • 14
    • 34249680236 scopus 로고    scopus 로고
    • Suitability of methods for species recognition in the Phialocephala fortinii-Acephala applanata species complex using DNA analysis
    • Grünig CR, Brunner PC, Duò A, Sieber TN. 2007. Suitability of methods for species recognition in the Phialocephala fortinii-Acephala applanata species complex using DNA analysis. Fungal Genet Biol 44:773-788.
    • (2007) Fungal Genet Biol , vol.44 , pp. 773-788
    • Grünig, C.R.1    Brunner, P.C.2    Duò, A.3    Sieber, T.N.4
  • 15
    • 0242578620 scopus 로고    scopus 로고
    • PhyML - a simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
    • Guindon S, Gascuel O. 2003. PhyML - a simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52:696-704.
    • (2003) Syst Biol , vol.52 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 16
    • 67650855518 scopus 로고
    • Lewis E. Wehmeyer, a world monograph of the genus Pleospora and its segregates
    • Holm L. 1962. Lewis E. Wehmeyer, a world monograph of the genus Pleospora and its segregates. Sven Bot Tidskr 56:377-381.
    • (1962) Sven Bot Tidskr , vol.56 , pp. 377-381
    • Holm, L.1
  • 17
    • 0034849408 scopus 로고    scopus 로고
    • MrBayes: Bayesian inference of phylogenetic trees
    • Huelsenbeck JP, Ronquist F. 2001. MrBayes: Bayesian inference of phylogenetic trees. Bioinformatics 17: 754-755.
    • (2001) Bioinformatics , vol.17 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2
  • 18
    • 84869518928 scopus 로고
    • Mycromycètes du pacifique sud III. Dématiées de Nouvelle-Calédonie.
    • Huguenin B. 1965. Mycromycètes du pacifique sud III. Dématiées de Nouvelle-Calédonie. Bull Soc Mycol France 81:694-698.
    • (1965) Bull Soc Mycol France , vol.81 , pp. 694-698
    • Huguenin, B.1
  • 19
    • 0029027219 scopus 로고
    • Cloning, nucleotide sequence, and expression of tef-1, the gene encoding translation elongation factor 1α (Ef-1α) of Neurospora crassa
    • Ichiishi A, Inoue H. 1995. Cloning, nucleotide sequence, and expression of tef-1, the gene encoding translation elongation factor 1α (Ef-1α) of Neurospora crassa. Jpn J Genet 70:273-287.
    • (1995) Jpn J Genet , vol.70 , pp. 273-287
    • Ichiishi, A.1    Inoue, H.2
  • 23
    • 1542643155 scopus 로고
    • Fragmenta mycologica XI
    • Karsten PA. 1884. Fragmenta mycologica XI. Hedwigia 23: 37-39.
    • (1884) Hedwigia , vol.23 , pp. 37-39
    • Karsten, P.A.1
  • 25
    • 33751215490 scopus 로고    scopus 로고
    • The family Pleosporaceae: Intergeneric relationships and phylogenetic perspectives based on sequence analyses of partial 28S rDNA
    • Kodsueb R, Dhanasekaran V, Aptroot A, Lumyong S, McKenzie EHC, Hyde KD, Jeewon R. 2006. The family Pleosporaceae: intergeneric relationships and phylogenetic perspectives based on sequence analyses of partial 28S rDNA. Mycologia 98:571-583.
    • (2006) Mycologia , vol.98 , pp. 571-583
    • Kodsueb, R.1    Dhanasekaran, V.2    Aptroot, A.3    Lumyong, S.4    McKenzie, E.H.C.5    Hyde, K.D.6    Jeewon, R.7
  • 26
    • 84874302426 scopus 로고
    • Illustrated key to the filamentous higher marine fungi
    • Mar
    • Kohlmeyer J, Volkmann-Kohlmeyer B. 1991. Illustrated key to the filamentous higher marine fungi. Bot Mar 34:1- 61.
    • (1991) Bot , vol.34 , pp. 1-61
    • Kohlmeyer, J.1    Volkmann-Kohlmeyer, B.2
  • 27
    • 0035731840 scopus 로고    scopus 로고
    • A gene genealogical approach to recognize phylogenetic species boundaries in the lichenized fungus Letharia
    • Kroken S, Taylor JW. 2001. A gene genealogical approach to recognize phylogenetic species boundaries in the lichenized fungus Letharia. Mycologia 93:38-53.
    • (2001) Mycologia , vol.93 , pp. 38-53
    • Kroken, S.1    Taylor, J.W.2
  • 28
    • 0002480432 scopus 로고
    • Über Phaeosphaeria Miyake und andere bitunicate Ascomyceten mit mehrfach querseptierten Ascosporen.
    • Leuchtmann A. 1984. Über Phaeosphaeria Miyake und andere bitunicate Ascomyceten mit mehrfach querseptierten Ascosporen. Sydowia 37:75-194.
    • (1984) Sydowia , vol.37 , pp. 75-194
    • Leuchtmann, A.1
  • 29
    • 0031981118 scopus 로고    scopus 로고
    • Severe outbreak of Stemphylium leaf blight, a new disease of cotton in Brazil
    • Mehta YR. 1998. Severe outbreak of Stemphylium leaf blight, a new disease of cotton in Brazil. Pl Dis 82:333-336.
    • (1998) Pl Dis , vol.82 , pp. 333-336
    • Mehta, Y.R.1
  • 30
    • 0036584932 scopus 로고    scopus 로고
    • ERIC and REP-PCR banding patterns and sequence analysis of the internal transcribed spacer of rDNA of Stemphylium solani isolates from cotton
    • -, Mehta A, Rosato YB. 2002. ERIC and REP-PCR banding patterns and sequence analysis of the internal transcribed spacer of rDNA of Stemphylium solani isolates from cotton. Curr Microbiol 44:323-328.
    • (2002) Curr Microbiol , vol.44 , pp. 323-328
    • Mehta, Y.R.1    Mehta, A.2    Rosato, Y.B.3
  • 31
    • 0032478185 scopus 로고    scopus 로고
    • Multiple evolutionary origins of the fungus causing Panama disease of banana: Concordant evidence from nuclear and mitochondrial gene genealogies
    • O'Donnell K, Kistler HC, Cigelnik E, Ploetz RC. 1998. Multiple evolutionary origins of the fungus causing Panama disease of banana: concordant evidence from nuclear and mitochondrial gene genealogies. Proc Nat Acad Sc USA 95:2044-2049.
    • (1998) Proc Nat Acad Sc USA , vol.95 , pp. 2044-2049
    • O'Donnell, K.1    Kistler, H.C.2    Cigelnik, E.3    Ploetz, R.C.4
  • 32
    • 0034608827 scopus 로고    scopus 로고
    • Gene genealogies reveal global phylogeographic structure and reproductive isolation among lineages of Fusarium graminearum, the fungus causing wheat scab
    • -, -, Tacke BK, Casper HH. 2000. Gene genealogies reveal global phylogeographic structure and reproductive isolation among lineages of Fusarium graminearum, the fungus causing wheat scab. Proc Nat Acad Sc USA 97:7905-7910.
    • (2000) Proc Nat Acad Sc USA , vol.97 , pp. 7905-7910
    • O'Donnell, K.1    Kistler, H.C.2    Cigelnik, E.3    Ploetz, R.C.4    Tacke, B.K.5    Casper, H.H.6
  • 33
    • 0030203863 scopus 로고    scopus 로고
    • Treeview: An application to display phylogenetic trees on personal computers
    • Page RDM. 1996. Treeview: an application to display phylogenetic trees on personal computers. Comput Appl Biosci 12:357-358.
    • (1996) Comput Appl Biosci , vol.12 , pp. 357-358
    • Page, R.D.M.1
  • 34
    • 0031773680 scopus 로고    scopus 로고
    • Modeltest: Testing the model of DNA substitution
    • Posada D, Crandall KA. 1998. Modeltest: testing the model of DNA substitution. Bioinformatics 19:817-818.
    • (1998) Bioinformatics , vol.19 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 35
    • 67650791388 scopus 로고    scopus 로고
    • Rambaut A. 1995. Se-Al v1.d1. Oxford, UK: Department of Zoology, Univ. Oxford.
    • Rambaut A. 1995. Se-Al v1.d1. Oxford, UK: Department of Zoology, Univ. Oxford.
  • 36
    • 0014048296 scopus 로고
    • Typification of Alternaria, Stemphylium, and Ulocladium
    • Simmons EG. 1967. Typification of Alternaria, Stemphylium, and Ulocladium. Mycologia 59:67-92.
    • (1967) Mycologia , vol.59 , pp. 67-92
    • Simmons, E.G.1
  • 37
    • 0014454632 scopus 로고
    • Perfect states of Stemphylium
    • -. 1969. Perfect states of Stemphylium. Mycologia 61:1-26.
    • (1969) Mycologia , vol.61 , pp. 1-26
    • Simmons, E.G.1
  • 38
    • 0000808375 scopus 로고
    • Perfect states of Stemphylium II
    • -. 1985. Perfect states of Stemphylium II. Sydowia Ann Mycol Ser II 38:284-293.
    • (1985) Sydowia Ann Mycol Ser II , vol.38 , pp. 284-293
    • Simmons, E.G.1
  • 39
    • 0000830340 scopus 로고
    • Perfect states of Stemphylium III
    • -. 1989. Perfect states of Stemphylium III. Mem NY Botanic Gard 49:305-307.
    • (1989) Mem NY Botanic Gard , vol.49 , pp. 305-307
    • Simmons, E.G.1
  • 40
    • 0011939866 scopus 로고    scopus 로고
    • Perfect states of Stemphylium IV
    • -. 2001. Perfect states of Stemphylium IV. Harv Pap Bot 6:199-208.
    • (2001) Harv Pap Bot , vol.6 , pp. 199-208
    • Simmons, E.G.1
  • 41
    • 67650794492 scopus 로고    scopus 로고
    • Swofford DL. 2002. PAUP*: phylogenetic analysis using parsimony *and other methods, Version 4. Sunder-land, Massachusetts: Sinauer Associates
    • Swofford DL. 2002. PAUP*: phylogenetic analysis using parsimony (*and other methods). Version 4. Sunder-land, Massachusetts: Sinauer Associates.
  • 43
    • 0031574072 scopus 로고    scopus 로고
    • The Clustal X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. 1997. The Clustal X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acid Res 25: 4876-4882.
    • (1997) Nucleic Acid Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 44
    • 0029124761 scopus 로고
    • Cloning and characterization of the gene encoding translation elongation factor 1α from Aureobasidium pullulans
    • Thornewell SJ, Peery RB, Skatrud PL. 1995. Cloning and characterization of the gene encoding translation elongation factor 1α from Aureobasidium pullulans. Gene 162:105-110.
    • (1995) Gene , vol.162 , pp. 105-110
    • Thornewell, S.J.1    Peery, R.B.2    Skatrud, P.L.3
  • 45
    • 77957801980 scopus 로고    scopus 로고
    • Three new species of Stemphylium from China
    • Wang Y, Zhang XG. 2006. Three new species of Stemphylium from China. Mycotaxon 96:77-81.
    • (2006) Mycotaxon , vol.96 , pp. 77-81
    • Wang, Y.1    Zhang, X.G.2
  • 46
    • 0004159734 scopus 로고
    • Gray leaf spot of tomato caused by Stemphylium solani, sp. nov
    • Weber GF. 1930. Gray leaf spot of tomato caused by Stemphylium solani, sp. nov. Phytopathology 20:513-518.
    • (1930) Phytopathology , vol.20 , pp. 513-518
    • Weber, G.F.1
  • 47
    • 0041086727 scopus 로고
    • The Pleospora state of Stemphylium triglochinicola
    • Webster J. 1969. The Pleospora state of Stemphylium triglochinicola. Trans Br Mycol Soc 53:478-482.
    • (1969) Trans Br Mycol Soc , vol.53 , pp. 478-482
    • Webster, J.1
  • 48
    • 0031421542 scopus 로고    scopus 로고
    • Isolation of tef1 encoding translation elongation factor EF1α from the homo-basidiomycete Schizophyllum commune
    • Wendland J, Kothe E. 1997. Isolation of tef1 encoding translation elongation factor EF1α from the homo-basidiomycete Schizophyllum commune. Mycol Res 101: 798-802.
    • (1997) Mycol Res , vol.101 , pp. 798-802
    • Wendland, J.1    Kothe, E.2
  • 49
    • 0005237927 scopus 로고
    • Synonymous species of Alternaria and Stemphylium in Japan
    • in Japanese
    • Yamamoto W. 1960. Synonymous species of Alternaria and Stemphylium in Japan [in Japanese]. Trans Mycol Soc Jpn 2(5):88-93.
    • (1960) Trans Mycol Soc Jpn , vol.2 , Issue.5 , pp. 88-93
    • Yamamoto, W.1
  • 50
    • 85021166993 scopus 로고
    • A leaf spot disease of Astragalus sinicus L
    • in Japanese
    • Yoshii H. 1929. A leaf spot disease of Astragalus sinicus L [in Japanese]. J Pl Protect 16:533-537.
    • (1929) J Pl Protect , vol.16 , pp. 533-537
    • Yoshii, H.1


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