-
1
-
-
0742305866
-
Network biology: Understanding the cell's functional organization
-
Barabasi AL, Oltvai ZN. 2004. Network biology: Understanding the cell's functional organization. Nat Rev Genet 5: 101-113.
-
(2004)
Nat Rev Genet
, vol.5
, pp. 101-113
-
-
Barabasi, A.L.1
Oltvai, Z.N.2
-
2
-
-
0028958594
-
Efficient pooling designs for library screening
-
Bruno WJ, Knill E, Balding DJ, Bruce DC, Doggett NA, Sawhill WW, Stallings RL, Whittaker CC, Torney DC. 1995. Efficient pooling designs for library screening. Genomics 26: 21-30.
-
(1995)
Genomics
, vol.26
, pp. 21-30
-
-
Bruno, W.J.1
Knill, E.2
Balding, D.J.3
Bruce, D.C.4
Doggett, N.A.5
Sawhill, W.W.6
Stallings, R.L.7
Whittaker, C.C.8
Torney, D.C.9
-
3
-
-
33744972290
-
A gene-centered C. elegans protein-DNA interaction network
-
Deplancke B, Mukhopadhyay A, Ao W, Elewa AM, Grove CA, Martinez NJ, Sequerra R, Doucette-Stamm L, Reece-Hoyes JS, Hope IA, et al. 2006. A gene-centered C. elegans protein-DNA interaction network. Cell 125: 1193-1205.
-
(2006)
Cell
, vol.125
, pp. 1193-1205
-
-
Deplancke, B.1
Mukhopadhyay, A.2
Ao, W.3
Elewa, A.M.4
Grove, C.A.5
Martinez, N.J.6
Sequerra, R.7
Doucette-Stamm, L.8
Reece-Hoyes, J.S.9
Hope, I.A.10
-
4
-
-
33644617753
-
Analysis of the human protein interactome and comparison with yeast, worm and fly interaction data sets
-
Gandhi TK, Zhong J, Mathivanan S, Karthick L, Chandrika KN, Mohan SS, Sharma S, Pinkert S, Nagaraju S, Periaswamy B, et al. 2006. Analysis of the human protein interactome and comparison with yeast, worm and fly interaction data sets. Nat Genet 38: 285-293.
-
(2006)
Nat Genet
, vol.38
, pp. 285-293
-
-
Gandhi, T.K.1
Zhong, J.2
Mathivanan, S.3
Karthick, L.4
Chandrika, K.N.5
Mohan, S.S.6
Sharma, S.7
Pinkert, S.8
Nagaraju, S.9
Periaswamy, B.10
-
5
-
-
0035836765
-
A comprehensive two-hybrid analysis to explore the yeast protein interactome
-
Ito T, Chiba T, Ozawa R, Yoshida M, Hattori M, Sakaki Y. 2001. A comprehensive two-hybrid analysis to explore the yeast protein interactome. Proc Natl Acad Sci 98: 4569-4574.
-
(2001)
Proc Natl Acad Sci
, vol.98
, pp. 4569-4574
-
-
Ito, T.1
Chiba, T.2
Ozawa, R.3
Yoshida, M.4
Hattori, M.5
Sakaki, Y.6
-
6
-
-
33646381658
-
A pooling-deconvolution strategy for biological network elucidation
-
Jin F, Hazbun T, Michaud GA, Salcius M, Predki PF, Fields S, Huang J. 2006. A pooling-deconvolution strategy for biological network elucidation. Nat Methods 3: 183-189.
-
(2006)
Nat Methods
, vol.3
, pp. 183-189
-
-
Jin, F.1
Hazbun, T.2
Michaud, G.A.3
Salcius, M.4
Predki, P.F.5
Fields, S.6
Huang, J.7
-
7
-
-
34250170441
-
A yeast two-hybrid smart-pool-array system for protein-interaction mapping
-
Jin F, Avramova L, Huang J, Hazbun T. 2007. A yeast two-hybrid smart-pool-array system for protein-interaction mapping. Nat Methods 4: 405-407.
-
(2007)
Nat Methods
, vol.4
, pp. 405-407
-
-
Jin, F.1
Avramova, L.2
Huang, J.3
Hazbun, T.4
-
8
-
-
46049118408
-
poolHiTS: A shifted transversal design based pooling strategy for high-throughput drug screening
-
doi: 10.1186/1471-2105-9-256
-
Kainkaryam RM, Woolf PJ. 2008. poolHiTS: A shifted transversal design based pooling strategy for high-throughput drug screening. BMC Bioinformatics 9: 256. doi: 10.1186/1471-2105-9-256.
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 256
-
-
Kainkaryam, R.M.1
Woolf, P.J.2
-
9
-
-
7444220617
-
-
Lamesch P, Milstein S, Hao T, Rosenberg J, Li N, Sequerra R, Bosak S, Doucette-Stamm L, Vandenhaute J, Hill DE, et al. 2004. C. elegans ORFeome version 3.1: Increasing the coverage of ORFeome resources with improved gene predictions. Genome Res 14: 2064-2069
-
Lamesch P, Milstein S, Hao T, Rosenberg J, Li N, Sequerra R, Bosak S, Doucette-Stamm L, Vandenhaute J, Hill DE, et al. 2004. C. elegans ORFeome version 3.1: Increasing the coverage of ORFeome resources with improved gene predictions. Genome Res 14: 2064-2069.
-
-
-
-
10
-
-
0038708337
-
-
Reboul J, Vaglio P, Rual JF, Lamesch P, Martinez M, Armstrong CM, Li S, Jacotot L, Bertin N, Janky R, et al. 2003. C. elegans ORFeome version 1.1: Experimental verification of the genome annotation and resource for proteome-scale protein expression. Nat Genet 34: 35-41
-
Reboul J, Vaglio P, Rual JF, Lamesch P, Martinez M, Armstrong CM, Li S, Jacotot L, Bertin N, Janky R, et al. 2003. C. elegans ORFeome version 1.1: Experimental verification of the genome annotation and resource for proteome-scale protein expression. Nat Genet 34: 35-41.
-
-
-
-
11
-
-
0027408247
-
Identification of a ten-amino acid proline-rich SH3 binding site
-
Ren R, Mayer BJ, Cicchetti P, Baltimore D. 1993. Identification of a ten-amino acid proline-rich SH3 binding site. Science 259: 1157-1161.
-
(1993)
Science
, vol.259
, pp. 1157-1161
-
-
Ren, R.1
Mayer, B.J.2
Cicchetti, P.3
Baltimore, D.4
-
12
-
-
27144530248
-
Towards a proteome-scale map of the human protein-protein interaction network
-
Rual JF, Venkatesan K, Hao T, Hirozane-Kishikawa T, Dricot A, Li N, Berriz GF, Gibbons FD, Dreze M, Ayivi-Guedehoussou N, et al. 2005. Towards a proteome-scale map of the human protein-protein interaction network. Nature 437: 1173-1178.
-
(2005)
Nature
, vol.437
, pp. 1173-1178
-
-
Rual, J.F.1
Venkatesan, K.2
Hao, T.3
Hirozane-Kishikawa, T.4
Dricot, A.5
Li, N.6
Berriz, G.F.7
Gibbons, F.D.8
Dreze, M.9
Ayivi-Guedehoussou, N.10
-
13
-
-
25144498379
-
A human protein-protein interaction network: A resource for annotating the proteome
-
Stelzl U, Worm U, Lalowski M, Haenig C, Brembeck FH, Goehler H, Stroedicke M, Zenkner M, Schoenherr A, Koeppen S, et al. 2005. A human protein-protein interaction network: A resource for annotating the proteome. Cell 122: 957-968.
-
(2005)
Cell
, vol.122
, pp. 957-968
-
-
Stelzl, U.1
Worm, U.2
Lalowski, M.3
Haenig, C.4
Brembeck, F.H.5
Goehler, H.6
Stroedicke, M.7
Zenkner, M.8
Schoenherr, A.9
Koeppen, S.10
-
14
-
-
33645151681
-
A new pooling strategy for high-throughput screening: The shifted transversal design
-
doi: 10.1186/1471-2105-7-28
-
Thierry-Mieg N. 2006a. A new pooling strategy for high-throughput screening: The shifted transversal design. BMC Bioinformatics 7: 28. doi: 10.1186/1471-2105-7-28.
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 28
-
-
Thierry-Mieg, N.1
-
15
-
-
33646352970
-
Pooling in systems biology becomes smart
-
Thierry-Mieg N. 2006b. Pooling in systems biology becomes smart. Nat Methods 3: 161-162.
-
(2006)
Nat Methods
, vol.3
, pp. 161-162
-
-
Thierry-Mieg, N.1
-
16
-
-
40049095112
-
Interpool: Interpreting smart-pooling results
-
Thierry-Mieg N, Bailly G. 2008. Interpool: Interpreting smart-pooling results. Bioinformatics 24: 696-703.
-
(2008)
Bioinformatics
, vol.24
, pp. 696-703
-
-
Thierry-Mieg, N.1
Bailly, G.2
-
17
-
-
0037059461
-
A combined experimental and computational strategy to define protein interaction networks for peptide recognition modules
-
Tong AH, Drees B, Nardelli G, Bader GD, Brannetti B, Castagnoli L, Evangelista M, Ferracuti S, Nelson B, Paoluzi S, et al. 2002. A combined experimental and computational strategy to define protein interaction networks for peptide recognition modules. Science 295: 321-324.
-
(2002)
Science
, vol.295
, pp. 321-324
-
-
Tong, A.H.1
Drees, B.2
Nardelli, G.3
Bader, G.D.4
Brannetti, B.5
Castagnoli, L.6
Evangelista, M.7
Ferracuti, S.8
Nelson, B.9
Paoluzi, S.10
-
18
-
-
10744230485
-
Global mapping of the yeast genetic interaction network
-
Tong AH, Lesage G, Bader GD, Ding H, Xu H, Xin X, Young J, Berriz GF, Brost RL, Chang M, et al. 2004. Global mapping of the yeast genetic interaction network. Science 303: 808-813.
-
(2004)
Science
, vol.303
, pp. 808-813
-
-
Tong, A.H.1
Lesage, G.2
Bader, G.D.3
Ding, H.4
Xu, H.5
Xin, X.6
Young, J.7
Berriz, G.F.8
Brost, R.L.9
Chang, M.10
-
19
-
-
0034628508
-
A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae
-
Uetz P, Giot L, Cagney G, Mansfield TA, Judson RS, Knight JR, Lockshon D, Narayan V, Srinivasan M, Pochart P, et al. 2000. A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae. Nature 403: 623-627.
-
(2000)
Nature
, vol.403
, pp. 623-627
-
-
Uetz, P.1
Giot, L.2
Cagney, G.3
Mansfield, T.A.4
Judson, R.S.5
Knight, J.R.6
Lockshon, D.7
Narayan, V.8
Srinivasan, M.9
Pochart, P.10
-
20
-
-
58149305794
-
An empirical framework for binary interactome mapping
-
Venkatesan K, Rual JF, Vazquez A, Stelzl U, Lemmens I, Hirozane-Kishikawa T, Hao T, Zenkner M, Xin X, Goh KI, et al. 2009. An empirical framework for binary interactome mapping. Nat Methods 6: 83-90.
-
(2009)
Nat Methods
, vol.6
, pp. 83-90
-
-
Venkatesan, K.1
Rual, J.F.2
Vazquez, A.3
Stelzl, U.4
Lemmens, I.5
Hirozane-Kishikawa, T.6
Hao, T.7
Zenkner, M.8
Xin, X.9
Goh, K.I.10
-
21
-
-
34547624524
-
Matrix and Steiner-triple-system smart pooling assays for high-performance transcription regulatory network mapping
-
Vermeirssen V, Deplancke B, Barrasa MI, Reece-Hoyes JS, Arda HE, Grove CA, Martinez NJ, Sequerra R, Doucette-Stamm L, Brent MR, et al. 2007. Matrix and Steiner-triple-system smart pooling assays for high-performance transcription regulatory network mapping. Nat Methods 4: 659-664.
-
(2007)
Nat Methods
, vol.4
, pp. 659-664
-
-
Vermeirssen, V.1
Deplancke, B.2
Barrasa, M.I.3
Reece-Hoyes, J.S.4
Arda, H.E.5
Grove, C.A.6
Martinez, N.J.7
Sequerra, R.8
Doucette-Stamm, L.9
Brent, M.R.10
-
23
-
-
53349117774
-
High-quality binary protein interaction map of the yeast interactome network
-
Yu H, Braun P, Yildirim MA, Lemmens I, Venkatesan K, Sahalie J, Hirozane-Kishikawa T, Gebreab F, Li N, Simonis N, et al. 2008. High-quality binary protein interaction map of the yeast interactome network. Science 322: 104-110.
-
(2008)
Science
, vol.322
, pp. 104-110
-
-
Yu, H.1
Braun, P.2
Yildirim, M.A.3
Lemmens, I.4
Venkatesan, K.5
Sahalie, J.6
Hirozane-Kishikawa, T.7
Gebreab, F.8
Li, N.9
Simonis, N.10
-
24
-
-
0346752097
-
A strategy for constructing large protein interaction maps using the yeast two-hybrid system: Regulated expression arrays and two-phase mating
-
Zhong J, Zhang H, Stanyon CA, Tromp G, Finley RL Jr. 2003. A strategy for constructing large protein interaction maps using the yeast two-hybrid system: Regulated expression arrays and two-phase mating. Genome Res 13: 2691-2699.
-
(2003)
Genome Res
, vol.13
, pp. 2691-2699
-
-
Zhong, J.1
Zhang, H.2
Stanyon, C.A.3
Tromp, G.4
Finley Jr., R.L.5
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