Purification, crystallization and preliminary X-ray crystallographic studies of RAIDD death-domain (DD)

International Journal of Molecular Sciences

Volumn 10, Issue 6, 2009, Pages 2501-2509

  Jang, Tae Ho ^a   Hyun, Ho Park ^a  

^a Yeungnam University   (South Korea)

Author keywords

Crystallization; Death domain (DD); PIDDosome; RAIDD

Indexed keywords

CASPASE 2; CASPASE RECRUITMENT DOMAIN SIGNALING PROTEIN; CRADD PROTEIN;

ARTICLE; CARBOXY TERMINAL SEQUENCE; CONTROLLED STUDY; CRYSTALLIZATION; GEL FILTRATION CHROMATOGRAPHY; HUMAN; PROTEIN PURIFICATION; X RAY CRYSTALLOGRAPHY;

CRYSTALLIZATION; DEATH-DOMAIN (DD); PIDDOSOME; RAIDD;

CHROMATOGRAPHY, AFFINITY; CLONING, MOLECULAR; CRADD SIGNALING ADAPTOR PROTEIN; CRYSTALLOGRAPHY, X-RAY; HUMANS; PROTEIN STRUCTURE, TERTIARY; RECOMBINANT PROTEINS;

EID: 67649668611     PISSN: None     EISSN: 14220067     Source Type: Journal    
DOI: 10.3390/ijms10062501     Document Type: Article

References (19)

1. Reed, J.C.; Doctor, K.S.; Godzik, A. The domains of apoptosis: A genomics perspective. Sci. STKE 2004, re9.
2. Park, H.H.; Lo, Y.; Lin, S.; Wang, L.; Yang, J.K.; Wu, H. The death domain superfamily in intracellular signaling of apoptosis and inflammation. Annu. Rev. Immunol. 2007, 25, 561-586. (Pubitemid 46697917)
3. Wajant, H. The Fas signaling pathway: More than a paradigm. Science 2002, 296, 1635-1636. (Pubitemid 34579146)
4. Zou, H.; Henzel, W.J.; Liu, X.; Lutschg, A.; Wang, X. Apaf-1, a human protein homologous to C. elegans CED-4, participates in cytochrome c-dependent activation of caspase-3. Cell 1997, 90, 405-413. (Pubitemid 27347231)
5. Tinel, A.; Tschopp, J. The PIDDosome, a protein complex implicated in activation of caspase-2 in response to genotoxic stress. Science 2004, 304, 843-846. (Pubitemid 38620177)
6. Salvesen, G.S. Caspases and apoptosis. Essays Biochem. 2002, 38, 9-19.
7. Janssens, S.; Tinel, A.; Lippens, S.; Tschopp, J. PIDD mediates NF-kappaB activation in response to DNA damage. Cell 2005, 123, 1079-1092. (Pubitemid 41785422)
8. Lin, Y.; Ma, W.; Benchimol, S. Pidd, a new death-domain-containing protein, is induced by p53 and promotes apoptosis. Nat. Genet. 2000, 26, 122-127.
9. Lassus, P.; Opitz-Araya, X.; Lazebnik, Y. Requirement for caspase-2 in stress-induced apoptosis before mitochondrial permeabilization. Science 2002, 297, 1352-1354. (Pubitemid 34913174)
10. Duan, H.; Dixit, V.M. RAIDD is a new 'death' adaptor molecule. Nature 1997, 385, 86-89. (Pubitemid 27024560)
11. Read, S.H.; Baliga, B.C.; Ekert, P.G.; Vaux, D.L.; Kumar, S.J. A novel Apaf-1-independent putative caspase-2 activation complex. Cell Biol. 2002, 159, 739-745. (Pubitemid 36008356)
12. Xiao, T.; Towb, P.; Wasserman, S.A.; Sprang, S.R. Three-dimensional structure of a complex between the death domains of pelle and tube. Cell 1999, 99, 545-555.
13. Huang, H.; Eberstadt, M.; Olejniczak, E.T.; Meadows, R.P.; Fesik, S. NMR structure and mutagenesis of the Fas (APO-1/CD95) death domain. Nature 1996, 384, 638-641.
14. Jeong, E.J.; Bang, S.; Lee, T.H.; Park, Y.I.; Sim, W.S.; Kim, K.S. The solution structure of FADD death domain. Structural basis of death domain interactions of Fas and FADD. J. Biol. Chem. 1999, 274, 16337-16342. (Pubitemid 129526385)
15. Terwilliger, T.C.; Berendzen, J. Bayesian correlated MAD phasing. Acta Cryst. 1997, D53, 571-579. (Pubitemid 27398697)
16. Otwinoski, Z.; Minor, W. Processing of x-ray diffraction data collected in oscillation mode. Methods Enzymol. 1997, 276, 307-326. (Pubitemid 27085611)
17. Brünger, A.T.; Adams, P.D.; Clore, G.M.; DeLano, W.L.; Gros, P.; Grosse-Kunsleve, R.W.; Jiang, J.S.; Kuszewski, J.; Nilges, M.; Pannu, N.S.; Read, R.J.; Rice, L.M.; Simonson, T.; Warren, G.L. Crystallography & NMR system: A new software suite for macromolecular structure determination. Acta Cryst. 1998, D54, 905-921. (Pubitemid 28443603)
18. Park, H.H.; Emmanuelle, L.; Stefan, R.; Solange, C.; Thomas, W.; Jurg, T.; Wu, H. Death domain assembly mechanism revealed by crystal structure of the oligomeric PIDDosome core complex. Cell 2007, 128, 533-546. (Pubitemid 46198901)
19. Park, H.H.; Wu, H. Crystal structure of RAIDD death domain implicates potential mechanism of PIDDosome assembly. J. Mol. Biol. 2006, 357, 358-364. (Pubitemid 43290739)