메뉴 건너뛰기




Volumn 72, Issue 5, 2009, Pages 865-873

Differential proteomic analysis of HT29 Cl.16E and intestinal epithelial cells by LC ESI/QTOF mass spectrometry

Author keywords

Crohn's disease; HT29 Cl.16E; Intestinal epithelial cells; Label free mass spectrometry; Proteomics

Indexed keywords

ACTIN; ADENOSYL HOMOCYSTEINASE; CARBOXYPEPTIDASE; ENZYME; GAMMA INTERFERON; HEAT SHOCK PROTEIN 70; HISTONE H1; HISTONE H2A; HISTONE H2B; HISTONE H3; HISTONE H4; LIPOCORTIN 1; LIPOCORTIN 5; MALATE DEHYDROGENASE; PEROXIREDOXIN 1; PROTEIN DISULFIDE ISOMERASE; PROTON TRANSPORTING ADENOSINE TRIPHOSPHATE SYNTHASE; RAN PROTEIN; TRIOSEPHOSPHATE ISOMERASE; TRYPTASE ALPHA 1; UBIQUITIN; UNCLASSIFIED DRUG;

EID: 67649531403     PISSN: 18743919     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jprot.2008.12.010     Document Type: Article
Times cited : (22)

References (34)
  • 2
    • 34249047618 scopus 로고    scopus 로고
    • Utility of serological markers in inflammatory bowel diseases: gadget or magic?
    • Papp M., Norman G.L., Altorjay I., and Lakatos P.L. Utility of serological markers in inflammatory bowel diseases: gadget or magic?. World J Gastroenterol 13 (2007) 2028-2036
    • (2007) World J Gastroenterol , vol.13 , pp. 2028-2036
    • Papp, M.1    Norman, G.L.2    Altorjay, I.3    Lakatos, P.L.4
  • 3
    • 58149240444 scopus 로고    scopus 로고
    • New serological biomarkers of inflammatory bowel disease
    • Li X., Conklin L., and Alex P. New serological biomarkers of inflammatory bowel disease. World J Gastroenterol 14 (2008) 5115-5124
    • (2008) World J Gastroenterol , vol.14 , pp. 5115-5124
    • Li, X.1    Conklin, L.2    Alex, P.3
  • 5
    • 37649017918 scopus 로고    scopus 로고
    • Serum protein profiling in patients with inflammatory bowel diseases using selective solid-phase bulk extraction, MALDI-TOF MS and chemometric data analysis
    • Nanni P., Parisi D., Roda G., Casale M., Belluzzi A., Roda E., et al. Serum protein profiling in patients with inflammatory bowel diseases using selective solid-phase bulk extraction, MALDI-TOF MS and chemometric data analysis. Rapid Commun Mass Spectrom 21 (2007) 4142-4148
    • (2007) Rapid Commun Mass Spectrom , vol.21 , pp. 4142-4148
    • Nanni, P.1    Parisi, D.2    Roda, G.3    Casale, M.4    Belluzzi, A.5    Roda, E.6
  • 7
    • 23344445169 scopus 로고    scopus 로고
    • Organizing a mucosal defense
    • Newberry R.D., and Lorenz R.G. Organizing a mucosal defense. Immunol Rev 206 (2005) 6-21
    • (2005) Immunol Rev , vol.206 , pp. 6-21
    • Newberry, R.D.1    Lorenz, R.G.2
  • 9
    • 0034960427 scopus 로고    scopus 로고
    • The role of epithelial cells in immune regulation in the gut
    • Shao L., Serrano D., and Mayer L. The role of epithelial cells in immune regulation in the gut. Semin Immunol 13 (2001) 163-176
    • (2001) Semin Immunol , vol.13 , pp. 163-176
    • Shao, L.1    Serrano, D.2    Mayer, L.3
  • 10
    • 19944432197 scopus 로고    scopus 로고
    • Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents
    • Ross P.L., Huang Y.L., Marchese J.N., Williamson B., Parker K., Hattan S., et al. Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents. Mol Cell Proteomics 3 (2004) 1154-1169
    • (2004) Mol Cell Proteomics , vol.3 , pp. 1154-1169
    • Ross, P.L.1    Huang, Y.L.2    Marchese, J.N.3    Williamson, B.4    Parker, K.5    Hattan, S.6
  • 11
    • 0032875697 scopus 로고    scopus 로고
    • Quantitative analysis of complex protein mixtures using isotope-coded affinity tags
    • Gygi S.P., Rist B., Gerber S.A., Turecek F., Gelb M.H., and Aebersold R. Quantitative analysis of complex protein mixtures using isotope-coded affinity tags. Nat Biotechnol 17 (1999) 994-999
    • (1999) Nat Biotechnol , vol.17 , pp. 994-999
    • Gygi, S.P.1    Rist, B.2    Gerber, S.A.3    Turecek, F.4    Gelb, M.H.5    Aebersold, R.6
  • 12
    • 0036583926 scopus 로고    scopus 로고
    • Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics
    • Ong S.E., Blagoev B., Kratchmarova I., Kristensen D.B., Steen H., Pandey A., et al. Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics. Mol Cell Proteomics 1 (2002) 376-386
    • (2002) Mol Cell Proteomics , vol.1 , pp. 376-386
    • Ong, S.E.1    Blagoev, B.2    Kratchmarova, I.3    Kristensen, D.B.4    Steen, H.5    Pandey, A.6
  • 13
    • 33947606962 scopus 로고    scopus 로고
    • Development of reagents for differential protein quantitation by subtractive parent (precursor) in scanning
    • Wåhlander Å., Arrigoni G., Wårell K., Levander F., Palmgren R., Maloisel J.L., et al. Development of reagents for differential protein quantitation by subtractive parent (precursor) in scanning. Proteome Res 6 (2007) 1101-1113
    • (2007) Proteome Res , vol.6 , pp. 1101-1113
    • Wåhlander, Å.1    Arrigoni, G.2    Wårell, K.3    Levander, F.4    Palmgren, R.5    Maloisel, J.L.6
  • 16
    • 6044226889 scopus 로고    scopus 로고
    • Differential mass spectrometry: a label-free LC-MS method for finding significant differences in complex peptide and protein mixtures
    • Wiener M.C., Sachs J.R., Deyanova E.G., and Yates N.A. Differential mass spectrometry: a label-free LC-MS method for finding significant differences in complex peptide and protein mixtures. Anal Chem 76 (2004) 6085-6096
    • (2004) Anal Chem , vol.76 , pp. 6085-6096
    • Wiener, M.C.1    Sachs, J.R.2    Deyanova, E.G.3    Yates, N.A.4
  • 17
    • 33747180294 scopus 로고    scopus 로고
    • A suite of algorithms for the comprehensive analysis of complex protein mixtures using high-resolution LC-MS
    • Free available at http://proteomics.fhcrc.org
    • Bellew M., Coram M., Fitzgibbon M., Igra M., Randolph T., Wang P., et al. A suite of algorithms for the comprehensive analysis of complex protein mixtures using high-resolution LC-MS. Bioinformatics 22 (2006) 1902-1909. http://proteomics.fhcrc.org Free available at http://proteomics.fhcrc.org
    • (2006) Bioinformatics , vol.22 , pp. 1902-1909
    • Bellew, M.1    Coram, M.2    Fitzgibbon, M.3    Igra, M.4    Randolph, T.5    Wang, P.6
  • 19
    • 0023612719 scopus 로고
    • Evidence for function of Ia molecules on gut epithelial cells in man
    • Mayer L., and Shlien R. Evidence for function of Ia molecules on gut epithelial cells in man. J Exp Med 166 (1987) 1471-1483
    • (1987) J Exp Med , vol.166 , pp. 1471-1483
    • Mayer, L.1    Shlien, R.2
  • 20
    • 67649508259 scopus 로고    scopus 로고
    • http://sashimi.sourceforge.net.
  • 21
    • 0040077442 scopus 로고    scopus 로고
    • Characterization of a 180-KDa intestinal epithelial cell membrane glycoprotein, gp180
    • Yio X.Y., and Mayer L. Characterization of a 180-KDa intestinal epithelial cell membrane glycoprotein, gp180. J Biol Chem 272 (1997) 12786-12792
    • (1997) J Biol Chem , vol.272 , pp. 12786-12792
    • Yio, X.Y.1    Mayer, L.2
  • 22
    • 14544283976 scopus 로고    scopus 로고
    • Activation of a unique population of cd8 (+) t cells by intestinal epithelial cells
    • Allez M., Brimnes J., Shao L., Dotan I., Nakazawa A., and Mayer L. Activation of a unique population of cd8 (+) t cells by intestinal epithelial cells. Ann N Y Acad Sci 1029 (2004) 22-35
    • (2004) Ann N Y Acad Sci , vol.1029 , pp. 22-35
    • Allez, M.1    Brimnes, J.2    Shao, L.3    Dotan, I.4    Nakazawa, A.5    Mayer, L.6
  • 23
    • 16844375712 scopus 로고    scopus 로고
    • Expression of the carcinoembryonic antigen gene is inhibited by SOX9 in human colon carcinoma cells
    • Jay P., Berta P., and Blache P. Expression of the carcinoembryonic antigen gene is inhibited by SOX9 in human colon carcinoma cells. Cancer Res 65 (2005) 2193-2198
    • (2005) Cancer Res , vol.65 , pp. 2193-2198
    • Jay, P.1    Berta, P.2    Blache, P.3
  • 24
    • 27644555055 scopus 로고    scopus 로고
    • Interpretation of shotgun proteomic data: the protein inference problem
    • Nesvizhskii A.I., and Aebersold R. Interpretation of shotgun proteomic data: the protein inference problem. Mol Cell Proteomics 4 (2005) 1419-1440
    • (2005) Mol Cell Proteomics , vol.4 , pp. 1419-1440
    • Nesvizhskii, A.I.1    Aebersold, R.2
  • 25
    • 0032872067 scopus 로고    scopus 로고
    • Recent advances in S-adenosyl-L-homocysteine hydrolase inhibitors and their potential clinical applications
    • Yuan C.S., Saso Y., Lazarides E., Borchardt R.T., and Robins M.J. Recent advances in S-adenosyl-L-homocysteine hydrolase inhibitors and their potential clinical applications. Expert Opin Ther Pat 9 (1999) 1197-1206
    • (1999) Expert Opin Ther Pat , vol.9 , pp. 1197-1206
    • Yuan, C.S.1    Saso, Y.2    Lazarides, E.3    Borchardt, R.T.4    Robins, M.J.5
  • 27
    • 33947603233 scopus 로고    scopus 로고
    • Differential protein expression profile in the intestinal epithelium from patients with inflammatory bowel disease
    • Shkoda A., Werner T., Daniel H., Gunckel M., Rogler G., and Haller D. Differential protein expression profile in the intestinal epithelium from patients with inflammatory bowel disease. J Proteome Res 6 (2007) 1114-1125
    • (2007) J Proteome Res , vol.6 , pp. 1114-1125
    • Shkoda, A.1    Werner, T.2    Daniel, H.3    Gunckel, M.4    Rogler, G.5    Haller, D.6
  • 28
    • 0027085730 scopus 로고
    • Lipocortin-present perforating and lipocortin-absent nonperforating Crohn's disease
    • Sakanoue Y., Horai T., Okamoto T., Hatada T., Shoji Y., Fujita S., et al. Lipocortin-present perforating and lipocortin-absent nonperforating Crohn's disease. Am J Surg 164 (1992) 341-344
    • (1992) Am J Surg , vol.164 , pp. 341-344
    • Sakanoue, Y.1    Horai, T.2    Okamoto, T.3    Hatada, T.4    Shoji, Y.5    Fujita, S.6
  • 29
    • 0036083696 scopus 로고    scopus 로고
    • Annexins: from structure to function
    • Gerke V., and Moss S.E. Annexins: from structure to function. Physiol Rev 82 (2002) 331-371
    • (2002) Physiol Rev , vol.82 , pp. 331-371
    • Gerke, V.1    Moss, S.E.2
  • 30
    • 0028230177 scopus 로고
    • Lipocortin-1: cellular mechanisms and clinical significance
    • Flower R.J., and Rothwell N.J. Lipocortin-1: cellular mechanisms and clinical significance. Trends Pharmacol Sci 15 (1994) 71-76
    • (1994) Trends Pharmacol Sci , vol.15 , pp. 71-76
    • Flower, R.J.1    Rothwell, N.J.2
  • 31
    • 33751564656 scopus 로고    scopus 로고
    • Annexin 1 negatively regulates IL-6 expression via effects on p38 MAPK and MAPK phosphatase-11
    • Yang Y.H., Toh M.L., Clyne C.D., Leech M., Aeberli D., Xue J., et al. Annexin 1 negatively regulates IL-6 expression via effects on p38 MAPK and MAPK phosphatase-11. J Immunol 177 (2006) 8148-8153
    • (2006) J Immunol , vol.177 , pp. 8148-8153
    • Yang, Y.H.1    Toh, M.L.2    Clyne, C.D.3    Leech, M.4    Aeberli, D.5    Xue, J.6
  • 32
    • 33749638414 scopus 로고    scopus 로고
    • Comparative proteomic studies on the pathogenesis of human ulcerative colitis
    • Hsieh S.Y., Shih T.C., Yeh C.Y., Lin C.J., Chou Y.Y., and Lee Y.S. Comparative proteomic studies on the pathogenesis of human ulcerative colitis. Proteomics 6 (2006) 5322-5331
    • (2006) Proteomics , vol.6 , pp. 5322-5331
    • Hsieh, S.Y.1    Shih, T.C.2    Yeh, C.Y.3    Lin, C.J.4    Chou, Y.Y.5    Lee, Y.S.6
  • 33
    • 24744432512 scopus 로고    scopus 로고
    • Mast cell tryptase controls paracellular permeability of the intestine. Role of protease-activated receptor 2 and beta-arrestins
    • Jacob C., Yang P.C., Darmoul D., Amadesi S., Saito T., Cottrell G.S., et al. Mast cell tryptase controls paracellular permeability of the intestine. Role of protease-activated receptor 2 and beta-arrestins. J Biol Chem 280 (2005) 31936-31948
    • (2005) J Biol Chem , vol.280 , pp. 31936-31948
    • Jacob, C.1    Yang, P.C.2    Darmoul, D.3    Amadesi, S.4    Saito, T.5    Cottrell, G.S.6
  • 34
    • 2342598349 scopus 로고    scopus 로고
    • Role and regulation of intestinal epithelial heat shock proteins in health and disease
    • Petrof E.O., Ciancio M.J., and Chang E.B. Role and regulation of intestinal epithelial heat shock proteins in health and disease. Chin J Dig Dis 5 (2004) 45-50
    • (2004) Chin J Dig Dis , vol.5 , pp. 45-50
    • Petrof, E.O.1    Ciancio, M.J.2    Chang, E.B.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.