Lung evolution as a cipher for physiology

Physiological Genomics

Volumn 38, Issue 1, 2009, Pages 1-6

  Torday, J S ^a   Rehan, V K ^a  

^a HARBOR UCLA MEDICAL CENTER   (United States)

Author keywords

Cell cell communication; Evolutionary biology; Functional genomics; Gene regulatory network; Systems biology

Indexed keywords

PARATHYROID HORMONE RELATED PROTEIN;

ALGORITHM; CELL INTERACTION; CELL PROTECTION; EVOLUTIONARY ADAPTATION; GENE MAPPING; GENE REGULATORY NETWORK; GENOMICS; LOCOMOTION; LUNG; MICROGRAVITY; MOLECULAR BIOLOGY; MOLECULAR EVOLUTION; MOLECULAR GENETICS; MOLECULAR INTERACTION; ONTOGENY; PHENOTYPE; PHYLOGENY; PHYSIOLOGY; PRIORITY JOURNAL; PROTEIN EXPRESSION; REVIEW; VERTEBRATE;

ALGORITHMS; CELL COMMUNICATION; EVOLUTION; HUMANS; LUNG; SYSTEMS BIOLOGY;

VERTEBRATA;

EID: 67649511745     PISSN: 10948341     EISSN: 15312267     Source Type: Journal    
DOI: 10.1152/physiolgenomics.90411.2008     Document Type: Review

References (42)

1. Barker N. The canonical Wnt/beta-catenin signalling pathway. Methods Mol Biol 468: 5-15, 2008.
2. Bosch RJ, Rodríguez-Puyol D, Bover J, Rodríguez-Puyol M. Parathyroid hormone-related protein: roles in the glomerulus. Exp Nephrol 7: 212-216, 1999. (Pubitemid 29258326)
3. Bosch RJ, Rojo-Linares P, Torrecillas-Casamayor G, Iglesias-Cruz MC, Rodríguez-Puyol D, Rodríguez-Puyol M. Effects of parathyroid hormone-related protein on human mesangial cells in culture. Am J Physiol Endocrinol Metab 277: E990-E995, 1999. (Pubitemid 30045991)
4. Bovolenta P, Esteve P, Ruiz JM, Cisneros E, Lopez-Rios J. Beyond Wnt inhibition: new functions of secreted Frizzled-related proteins in development and disease. J Cell Sci 121: 737-746, 2008. (Pubitemid 351578109)
5. Cowley AW Jr. Genomics and homeostasis. Am J Physiol Regul Integr Comp Physiol 284: R611-R627, 2003. (Pubitemid 36342794)
6. Crespi EJ, Denver RJ. Leptin (ob gene) of the South African clawed frog Xenopus laevis. Proc Natl Acad Sci USA 103: 10092-10097, 2006. (Pubitemid 43993628)
7. Csete M, Walikonis J, Slawny N, Wei Y, Korsnes S, Doyle JC, Wold B. Oxygen-mediated regulation of skeletal muscle satellite cell proliferation and adipogenesis in culture. J Cell Physiol 189: 189-196, 2001. (Pubitemid 32946030)
8. Darwin C. The Origin of Species. London: John Murray, 1859.
9. De Robertis EM. Evo-devo: variations on ancestral themes. Cell 132: 185-195, 2008. (Pubitemid 351172437)
10. Dobzhansky T. Nothing in biology makes sense except in the light of evolution. Am Biol Teacher 35: 125-129, 1973.
11. Gilbert SF, Opitz JM, Raff RA. Resynthesizing evolutionary and developmental biology. Dev Biol 73: 357-372, 1996. (Pubitemid 26064862)
12. Hood L, Rowen L, Galas DJ, Aitchison JD. Systems biology at the Institute for Systems Biology. Brief Funct Genom Proteom 7: 239-248, 2008.
13. Horowitz A, Simons M. Branching morphogenesis. Circ Res 103: 784-795, 2008.
14. Kimura M. The Neutral Theory of Molecular Evolution. Cambridge, UK: Cambridge University Press, 1983.
15. King N, Hittinger CT, Carroll SB. Evolution of key cell signaling and adhesion protein families predates animal origins. Science 301: 361-363, 2003. (Pubitemid 36877069)
16. MacDonald BA, Sund M, Grant MA, Pfaff KL, Holthaus K, Zon LI, Kalluri R. Zebrafish to humans: evolution of the alpha3-chain of type IV collagen and emergence of the autoimmune epitopes associated with Goodpasture syndrome. Blood 107: 1908-1915, 2006. (Pubitemid 43289371)
17. Macklem PT. Emergent phenomena and the secrets of life. J Appl Physiol 104: 1844-1846, 2008.
18. McGinnis W; Levine MS, Hafen E, Kuroiwa A, Gehring WJ. A conserved DNA sequence in homoeotic genes of the Drosophila Antennapedia and bithorax complexes. Nature 308: 428-433, 1984. (Pubitemid 14130914)
19. Mezentseva NV, Kumaratilake JS, Newman SA. The brown adipocyte differentiation pathway in birds: an evolutionary road not taken. BMC Biol 6: 17, 2008. (Pubitemid 351676579)
20. Morowitz HJ. A theory of biochemical organization, metabolic pathways, and evolution. Complexity 4: 39-53, 1999. (Pubitemid 129281954)
21. Polanyi M. Life's irreducible structure. Live mechanisms and information in DNA are boundary conditions with a sequence of boundaries above them. Science 160: 1308-1312, 1968.
22. Rehan VK, Torday JS. Lower parathyroid hormone-related protein content of tracheal aspirates in very low birth weight infants who develop bronchopulmonary dysplasia. Pediatr Res 60: 216-220, 2006. (Pubitemid 44297596)
23. Romer AS. Major steps in vertebrate evolution. Science 158: 1629-1637, 1967.
24. Rosenblum ND. Developmental biology of the human kidney. Semin Fetal Neonatal Med 13: 125-132, 2008.
25. Scott MP, Weiner AJ. Structural relationships among genes that control development: sequence homology between the Antennapedia, Ultrabithorax, and fushi tarazu loci of Drosophila. Proc Natl Acad Sci USA 81: 4115-4119, 1984. (Pubitemid 14054531)
26. The American Academy of Arts and Sciences. Advancing Research in Science and Engineering. Cambridge, MA: American Academy of Arts and Sciences, 2008.
27. Torday JS, Torday DP, Gutnick J, Qin J, Rehan V. Biologic role of fetal lung fibroblast triglycerides as antioxidants. Pediatr Res 49: 843-849, 2001. (Pubitemid 32522063)
28. Torday JS, Sun H, Wang L, Torres E, Sunday ME, Rubin LP. Leptin mediates the parathyroid hormone-related protein paracrine stimulation of fetal lung maturation. Am J Physiol Lung Cell Mol Physiol 282: L405-L410, 2002. (Pubitemid 34654642)
29. Torday JS, Rehan VK. Stretch-stimulated surfactant synthesis is coordinated by the paracrine actions of PTHrP and leptin. Am J Physiol Lung Cell Mol Physiol 283: L130-L135, 2002. (Pubitemid 34764549)
30. Torday JS. Parathyroid hormone-related protein is a gravisensor in lung and bone cell biology. Adv Space Res 32: 1569-1576, 2003. (Pubitemid 38034108)
31. Torday JS, Rehan VK. Mechanotransduction determines the structure and function of lung and bone: a theoretical model for the pathophysiology of chronic disease. Cell Biochem Biophys 37: 235-246, 2003.
32. Torday JS, Torres E, Rehan VK. The role of fibroblast transdifferentiation in lung epithelial cell proliferation, differentiation, and repair in vitro. Pediatr Pathol Mol Med 22: 189-207, 2003. (Pubitemid 36548148)
33. Torday JS. A periodic table for biology. Scientist 18: 32-33, 2004. (Pubitemid 38943317)
34. Torday JS, Rehan VK. Deconvoluting lung evolution using functional/comparative genomics. Am J Respir Cell Mol Biol 31: 8-12, 2004. (Pubitemid 38888033)
35. Torday JS, Rehan VK. The evolutionary continuum from lung development to homeostasis and repair. Am J Physiol Lung Cell Mol Physiol 292: L608-L611, 2007. (Pubitemid 46376977)
36. Torday JS, Rehan VK. Developmental cell/molecular biologic approach to the etiology and treatment of bronchopulmonary dysplasia. Pediatr Res 62: 2-7, 2007. (Pubitemid 46985841)
37. Torday JS, Ihida-Stansbury K, Rehan VK. Leptin stimulates Xenopus lung development: evolution in a dish. Evol Dev 11: 218-223, 2009.
38. Torday JS, Rehan VK. Exploiting cellular-developmental evolution as the scientific basis for preventive medicine. Med Hypotheses 72: 596-602, 2009.
39. Voas MG, Rebay I. Signal integration during development: insights from the Drosophila eye. Dev Dyn 229: 162-175, 2004. (Pubitemid 38036832)
40. Warburton D, Bellusci S, De Langhe S, Del Moral PM, Fleury V, Mailleux A, Tefft D, Unbekandt M, Wang K, Shi W. Molecular mechanisms of early lung specification and branching morphogenesis. Pediatr Res 57: 26R-37R, 2005. (Pubitemid 40593243)
41. Weibel ER, Taylor CR, Bolis L. Principles of Animal Design. Cambridge UK: Cambridge University Press, 1998.
42. West GB, Brown JH, Enquist BJ. A general model for the origin of allometric scaling laws in biology. Science 276: 122-126, 1997. (Pubitemid 27161259)