Comparative proteome analysis of two antagonist Bacillus subtilis strains

Journal of Microbiology and Biotechnology

Volumn 19, Issue 4, 2009, Pages 351-357

  Zhang, C X ^a,b   Zhao, X ^a   Han, F ^a   Yang, M F ^a   Chen, H ^a   Chida, T ^c   Shen, S H ^a  

^a INSTITUTE OF BOTANY   (China)

^b INSTITUTE OF PLANT PROTECTION   (China)

^c Chemicals Agrochemicals Planning and Development Department   (Japan)

Author keywords

2DE PAGE; Bacillus subtilis; In vitro antifungal activity; Magnaporthe grisea P131; Proteomics

Indexed keywords

ACONITATE HYDRATASE; AMYLASE ISOENZYME; CELL PROTEIN; CELLULASE; HEAT SHOCK PROTEIN; PROTEOME; SECRETORY PROTEIN;

ANTIFUNGAL ACTIVITY; ARTICLE; BACILLUS SUBTILIS; BACTERIAL GROWTH; BACTERIAL STRAIN; BACTERIUM CULTURE; CONTROLLED STUDY; IN VITRO STUDY; MAGNAPORTHE GRISEA; MATRIX ASSISTED LASER DESORPTION IONIZATION TIME OF FLIGHT MASS SPECTROMETRY; NONHUMAN; NUCLEOTIDE SEQUENCE; PROTEIN ANALYSIS; PROTEIN DATABASE; PROTEIN EXPRESSION; STRAIN DIFFERENCE;

ANTIBIOSIS; ANTIFUNGAL AGENTS; BACILLUS SUBTILIS; BACTERIAL PROTEINS; DATABASES, PROTEIN; ELECTROPHORESIS, GEL, TWO-DIMENSIONAL; MAGNAPORTHE; PROTEOME; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION;

BACILLUS SUBTILIS; MAGNAPORTHE GRISEA;

EID: 67649352699     PISSN: 10177825     EISSN: 17388872     Source Type: Journal    
DOI: 10.4014/jmb.0805.346     Document Type: Article

References (32)

1. Abbasi, F. M. and S. Komatsu. 2004. A proteomic approach to analyze salt-responsive proteins in rice leaf sheath. Proteomics 4: 2072-2081.
2. Almeida, F. B. R., F. M. Cerqueira, S. R. N. Nascimento, C. J. Ulhoa, and A. L. Lima. 2007. Mycoparasitism studies of Trichoderma harzianum strains against Rhizoctonia solani: Evaluation of coiling and hydrolytic enzyme production. Biotechnol. Lett. 29: 1189-1193.
3. Bais, H. P., R. Fall, and J. M.Vianco. 2004. Biocontrol of Bacillus subtilis against infection of Arabidopsis roots by Pseudomonas syringae is facilitated by biofilm formation and surfactin production. Plant Physiol. 134: 307-319.
4. Bradbury, A. J., M. J. Gruer, K. E. Rudd, and J. R. Guest. 1996. The second aconitase (AcnB) of Escherichia coli. Microbiology 142: 389-400.
5. Cenci, G.., F. Trotta, and G. Caldini. 2006. Tolerance to challenges miming gastrointestinal transit by spores and vegetative cells of Bacillus clausii. J. Appl. Microbiol. 101: 1208-1215.
6. Chitarra, G. S., P. Breeuwer, M. J. R. Nout, A. C. Aelst, F. M. Rombouts, and T. Abee. 2003. An antifungal compound produced by Bacillus subtilis YM 10-20 inhibits germination of Penicillium roqueforti conidiospores. J. Appl. Microbiol. 94: 159-166.
7. Dean, R. A., N. J. Talbot, D. J. Ebbole, M. L. Farman, T. K. Mitchell, M. J. Orbach, et al. 2005. The genome sequence of the rice blast fungus Magnaporthe grisea. Nature 434: 980-986.
8. Eymann, C., A. Dreisbach, D. Albrecht, J. Bernhardt, D. Becher, S. Gentner, et al. 2004. A comprehensive proteome map of growing Bacillus subtilis cells. Proteomics 4: 2849-2876.
9. Fan, Q., S. P. Tian, Y. X. Li, Y. Wang, Y. Xu, and J. D. Li. 2000. Postharvest biological control of green mold and blue mold of citrus fruits by Bacillus subtilis. Acta Phytopathol Sin 30: 343-348.
10. Fan, Q., S. P. Tian, Y. X. Li, Y. Xu, and Y. Wang. 2000. Biological control of postharvest brown rot in peach and nectarine fruits by Bacillus subtilis (B-912). Acta Bot. Sin. 42: 1137-1143.
11. Hecker, M. and U. Völker. 2004. Towards a comprehensive understanding of Bacillus subtilis cell physiology by physiological proteomics. Proteomics 4: 3727-3750.
12. Huang, X. W., B. Tian, Q. Niu, Q. N. Yang, L. Zhang, and K. Zhang. 2005. An extracellular protease from Brevibacillus laterosporus G4 without parasporal crystals can serve as a pathogenic factor in infection of nematodes. Res. Microbiol. 156: 719-727.
13. Kim, K. H., Y. O. Kim, B. S. Ko, H. J. Youn, and D. S. Lee. 2004. Over-expression of the gene (bglBC1) from Bacillus circulans encoding an endo-β-(1-3),(1-4)-glucanase useful for the preparation of oligosaccharides from barley β-glucan. Biot. Lett. 26: 1749-1755.
14. Krüger, E., E. Witt, S. Ohlmeier, R. Hanschke, and M. Hecker. 2000. The Clp proteases of Bacillus subtilis are directly involved in degradation of misfolded proteins. J. Appl. Bacteriol. 182: 3259-3265.
15. Kunst, F., N. Ogasawara, I. Moszer, A. M. Albertini, G. Alloni, V. et al. 1997. The complete genome sequence of the Grampositive bacterium Bacillus subtilis. Nature 390: 249-256.
16. Lam, Y. W., H. X. Wang, and T. B. Ng. 2000. A robust cysteine-deficient chitinase-like antifungal protein from inner shoots of the edible chive Allium tuberosum. Biochem. Biophys. Res. Co. Commun. 279: 74-80.
17. Leloup, L., J. L. Saux, M. F. Petit-Glatron, and R. Chambert. 1999. Kinetics of the secretion of Bacillus subtilis levanase overproduced during the exponential phase of growth. Microbiology 145: 613-619.
18. Levy, I., Z. Shani, and O. Shoseyocv. 2002. Modification of polysaccharides and plant cell wall by endo-1,4-β-glucanase and cellulose-binding domains. Biomol. Engin. 19: 17-30.
19. Liu, Y. F., Z. Y. Chen, T. B. Ng, J. Zhang, M. G. Zhou, F. P. Song, and Y. Z. Liu. 2006. Bacisubin, an antifungal protein with ribonuclease and hemagglutinating activities from Bacillus subtilis strain B-916. Peptides 28: 553-559.
20. Mäder, U., H. Antelmann, T. Buder, M. K. Dahl, M. Hecker, and G. Homuth. 2002. Bacillus subtilis functional genomics: Genomewide analysis of the DegS-DegU regulon by transcriptomics and proteomics. Mol. Genet. Genomics. 268: 455-467.
21. Marten, P., K. Smalla, and G. Berg. 2000. Genotypic and phenotypic differentiation of an antifungal biocontrol strain belonging to Bacillus subtilis. J. Appl. Microbiol. 89: 463-471.
22. Moreno, A. B., A. M. Pozo, and B. S. Segundo. 2006. Antifungal mechanism of the Aspergillus giganteus AFP against the rice blast fungus Magnaporthe grisea. Appl. Microbiol. Biotechnol. 72: 883-895.
23. Nouwens, A. S., M. D. P. Willcox, B. J. Walsh, and S. J. Cordwell. 2002. Proteomic comparison of membrane and extracellular proteins from invasive (PAO1) and cytotoxic (6206) strains of Pseudomonas aeruginosa. Proteomics 2: 1325-1346.
24. Ryu, C. M., M. A. Farag, C. H. Hu, M. S. Reddy, J. W. Kloepper, and P. W. Pare. 2004. Bacterial volatiles induce systemic resistance in Arabidopsis. Plant Physiol. 134: 1017-1026.
25. Shen, S. H., Y. X. Jing, and T. Y. Kuang. 2003. Proteomics approach to identify wound-response related proteins from rice leaf sheath. Proteomics 3: 527-535.
26. Souto, G. L., M. S. Correa, N. L. Montecchia, N. L. Kerber, N. L. Pucheu, M. Bachur, and A. F. Garcia. 2004. Genetic and functional characterization of a Bacillus sp. strain excreting surfactin and antifungal metabolites partially identified as iturin-like compounds. J. Appl. Microbiol. 97: 1247-1256.
27. Tam, L. T., H. Antelmann, C. Eymann, D. Albrecht, J. Bernhardt, and M. Hecker. 2006. Proteome signatures for stress and starvation in Bacillus subtilis as revealed by a 2-D gel image color coding approach. Proteomics 6: 4565-4585.
28. Tang, Y., J. R. Guest, P. J. Artymiuk, R. C. Read and J. Green 2004. Post-transcriptional regulation of bacterial motility by aconitase proteins. Mol. Microbiol. 51: 1817-1826.
29. Tian, B. Y., J. K. Yang, L. H. Lian, C. Y. Wang, N. Li, and K. Q. Zhang. 2007. Role of an extracellular neutral protease in infection against nematodes by Brevibacillus laterosporus strain G4. Appl. Microbiol. Biotech. 74: 372-380.
30. Tjalsma, H., H. Antelmann, J. D. H. Jongbloed, P. G. Braun, E. Darmon, R. Dorenbos, et al. 2004. Proteomics of protein secretion by Bacillus subtilis: Separating the "secrets" of the secretome. Microbiol. Mol. Biol. R 68: 207-233.
31. Zanen, G., H. Antelmann, R. Meima, J. D. H. Jongbloéd, M. Kolkman, M. Hecker, J. M. Dijl, and W. J. Ouax. 2006. Proteomic dissection of potential signal recognition particle dependence in protein secretion by Bacillus subtilis. Proteomics 6: 3636-3648.
32. Zhang, C. X., X. Zhao, Y. X. Jing, T. Chida, H. Chen, and S. H. Shen. 2008. Phenotypic and biological properties of two antagonist Bacillus subtilis strains. World J. Microbiol. Biotech. 24: 2179-2181.