Next generation synthetic vectors for transformation of the plastid genome of higher plants

Plant Molecular Biology

Volumn 70, Issue 5, 2009, Pages 487-498

  Sinagawa García, Sugey Ramona ^a,b   Tungsuchat Huang, Tarinee ^a   Paredes López, Octavio ^b   Maliga, Pal ^a  

^a RUTGERS UNIVERSITY   (United States)

^b DEPARTAMENTO DE INGENIERÍA GENÉTICA   (Mexico)

Author keywords

Homologous recombination; Nicotiana tabacum; Plastid transformation; Tobacco; Vector

Indexed keywords

ACETYL COENZYME A CARBOXYLASE; MESSENGER RNA; RBCL PROTEIN, PLASTID; RIBULOSEBISPHOSPHATE CARBOXYLASE; SPACER DNA; SPECTINOMYCIN;

ARTICLE; DRUG EFFECT; DRUG RESISTANCE; GENE EXPRESSION REGULATION; GENE VECTOR; GENETIC TRANSFORMATION; GENETICS; IMMUNOBLOTTING; METABOLISM; NORTHERN BLOTTING; PLANT; PLASTID GENOME; POLYACRYLAMIDE GEL ELECTROPHORESIS; TOBACCO; TRANSGENIC PLANT;

ACETYL-COA CARBOXYLASE; BLOTTING, NORTHERN; DNA, INTERGENIC; DRUG RESISTANCE; ELECTROPHORESIS, POLYACRYLAMIDE GEL; GENE EXPRESSION REGULATION, PLANT; GENETIC VECTORS; GENOME, PLASTID; IMMUNOBLOTTING; PLANTS; PLANTS, GENETICALLY MODIFIED; RIBULOSE-BISPHOSPHATE CARBOXYLASE; RNA, MESSENGER; SPECTINOMYCIN; TOBACCO; TRANSFORMATION, GENETIC;

EMBRYOPHYTA; ESCHERICHIA COLI; NICOTIANA TABACUM;

EID: 67649224281     PISSN: 01674412     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11103-009-9486-x     Document Type: Article

References (54)

1. I Birch-Machin C Newell JM Hibberd JC Gray 2004 Accumulation of rotavirus VP6 protein in chloroplasts of transplastomic tobacco is limited by protein stability Plant Biotechnol J 2 261 270 10.1111/j.1467-7652.2004.00072.x
2. R Bock 2001 Transgenic plastids in basic research and plant biotechnology J Mol Biol 312 425 438 10.1006/jmbi.2001.4960
3. R Bock 2007 Plastid biotechnology: prospects for herbicide and insect resistance, metabolic engineering and molecular farming Curr Opin Biotechnol 18 100 106 10.1016/j.copbio.2006.12.001
4. R Bock P Maliga 1995 In vivo testing of a tobacco plastid DNA segment for guide RNA function in psbL editing Mol Gen Genet 247 439 443
5. R Bock H Kössel P Maliga 1994 Introduction of a heterologous editing site into the tobacco plastid genome: the lack of RNA editing leads to a mutant phenotype EMBO J 13 4623 4628 (Pubitemid 24310212)
6. H Carrer P Maliga 1995 Targeted insertion of foreign genes into the tobacco plastid genome without physical linkage to the selectable marker gene Biotechnology 13 791 794 10.1038/nbt0895-791
7. H Carrer JM Staub P Maliga 1990 Gentamycin resistance in Nicotiana conferred by AAC(3)-I, a narrow substrate specificity acetyl transferase Plant Mol Biol 17 301 303 10.1007/BF00039510
8. H Carrer TN Hockenberry Z Svab P Maliga 1993 Kanamycin resistance as a selectable marker for plastid transformation in tobacco Mol Gen Genet 241 49 56 (Pubitemid 23299204)
9. SK Chakrabarti KA Lutz B Lertwirijawong Z Svab P Maliga 2006 Expression of the cry9Aa2 B.t. gene in the tobacco chlroplasts confers extreme resistance to potato tuber moth Transgenic Res 15 481 488 10.1007/s11248-006-0018-z
10. GM Church W Gilbert 1984 Genomic sequencing Proc Natl Acad Sci USA 81 1991 1995 10.1073/pnas.81.7.1991 (Pubitemid 14146592)
11. H Daniell S Chebolu S Kumar M Singleton R Falconer 2005 Chloroplast-derived vaccine antigens and other therapeutic proteins Vaccine 23 1779 1783 10.1016/j.vaccine.2004.11.004
12. N Dufourmantel B Pelissier F Garcon G Peltier JM Ferullo G Tissot 2004 Generation of fertile transplastomic soybean Plant Mol Biol 55 479 489 10.1007/s11103-004-0192-4
13. EM Horvath SO Peter T Joët D Rumeau L Cournac GV Horvath TA Kavanagh C Schäfer G Peltier P Medgyesy 2000 Target inactivation of the plastid ndhB gene in tobacco results in an enhanced sensitivity of photosynthesis to moderate stomatal closure Plant Physiol 123 1337 1350 10.1104/pp.123.4.1337
14. H Kanamoto A Yamashita H Asao S Okumura H Takase M Hattori A Yokota K Tomizawa 2006 Efficient and stable transformation of Lactuca sativa L. cv. Cisco (lettuce) plastids Transgenic Res 15 205 217 10.1007/s11248-005-3997-2
15. I Kanevski P Maliga DF Rhoades S Gutteridge 1999 Plastome engineering of ribulose-1, 5-bisphosphate carboxylase/oxygenase in tobacco to form a sunflower large subunit and a tobacco small subunit hybrid Plant Physiol 119 133 141 10.1104/pp.119.1.133 (Pubitemid 29384589)
16. TA Kavanagh ND Thanh NT Lao N [tmp] McGrath SO Peter EM Horváth PJ Dix P Medgyesy 1999 Homeologous plastid DNA transformation in tobacco is mediated by multiple recombination events Genetics 152 1111 1122 (Pubitemid 29330910)
17. O Khakhlova R Bock 2006 Elimination of deleterious mutations in plastid genomes by gene conversion Plant J 46 85 94 10.1111/j.1365-313X.2006.02673.x
18. SMJ Klaus FC Huang TJ Golds H-U Koop 2004 Generation of marker-free plastid transformants using a transiently cointegrated selection gene Nat Biotechnol 22 225 229 10.1038/nbt933
19. Koop HU, Herz S, Golds TJ, Nickelsen J (2007) The genetic transformation of plastids. In: Bock R (ed) Cell and molecular biology of plastids (topics in current genetics). Springer Verlag, Berlin, pp 457-510
20. H Kuroda P Maliga 2001 Sequences downstream of the translation initiation codon are important determinants of translation efficiency in chloroplasts Plant Physiol 125 430 436 10.1104/pp.125.1.430
21. C Lelivelt M [tmp] McCabe C Newell B de Snoo K Van Dunn I Birch-Machin JC Gray K Mills JM Nugent 2005 Plastid transformation in lettuce (Lactuca sativa L) Plant Mol Biol 58 763 774 10.1007/s11103-005-7704-8
22. KA Lutz P Maliga 2007 Construction of marker-free transplastomic plants Curr Opin Biotechnol 18 107 114 10.1016/j.copbio.2007.02.003
23. KA Lutz P Maliga 2008 Plastid genomes in a regenerating tobacco shoot derive from a small number of copies selected through a stochastic process Plant J 56 975 983 10.1111/j.1365-313X.2008.03655.x
24. KA Lutz Z Svab P Maliga 2006 Construction of marker-free transplastomic tobacco using the Cre-loxP site-specific recombination system Nat Protocols 1 900 910 10.1038/nprot.2006.118
25. KA Lutz AK Azhagiri T Tungsuchat-Huang P Maliga 2007 A guide to choosing vectors for transformation of the plastid genome of higher plants Plant Physiol 145 1201 1210 10.1104/pp.107.106963
26. P Maliga 2003 Progress towards commercialization of plastid transformation technology Trends Biotechnol 21 20 28 10.1016/S0167-7799(02) 00007-0
27. P Maliga 2004 Plastid transformation in higher plants Annu Rev Plant Biol 55 289 313 10.1146/annurev.arplant.55.031903.141633
28. RA Monde JC Greene DB Stern 2000 The sequence and secondary structure of the 3-UTR affect 3-end maturation, RNA accumulation, and translation in tobacco chloroplasts Plant Mol Biol 44 529 542 10.1023/A:1026540310934
29. RA Monde G Schuster DB Stern 2000 Processing and degradation of chloroplast mRNA Biochimie 82 573 582 10.1016/S0300-9084(00)00606-4
30. T Murashige F Skoog 1962 A revised medium for the growth and bioassay with tobacco tissue culture Physiol Plant 15 473 497 10.1111/j.1399-3054.1962. tb08052.x
31. JD Palmer 1985 Comparative organization of chloroplast genomes Annu Rev Genet 19 325 354 10.1146/annurev.ge.19.120185.001545
32. M Rogalski MA Schottler W Thiele WX Schulze R Bock 2008 Rpl33, a nonessential plastid-encoded ribosomal protein in tobacco, is required under cold stress conditions Plant Cell 20 2221 2237 10.1105/tpc.108.060392
33. S Ruf M Hermann IJ Berger H Carrer R Bock 2001 Stable genetic transformation of tomato plastids: foreign protein expression in fruit Nat Biotechnol 19 870 875 10.1038/nbt0901-870
34. JM Shaver DJ Oldenburg AJ Bendich 2006 Changes in chloroplast DNA during development in tobacco, Medicago truncatula, pea, and maize Planta 224 72 82 10.1007/s00425-005-0195-7
35. K Shinozaki M Ohme M Tanaka T Wakasugi N Hayashida T Matsubayashi N Zaita J Chunwongse J Obokata K Yamaguchi-Shinozaki C Ohto K Torazawa B-Y Meng M Sugita H Deno T Kamogashira K Yamada J Kusuda F Takaiwa A Kato N Tohdoh H Shimada M Sugiura 1986 The complete nucleotide sequence of the tobacco chloroplast genome: its gene organization and expression EMBO J 5 2043 2049
36. D Silhavy P Maliga 1998 Mapping of the promoters for the nucleus-encoded plastid RNA polymerase (NEP) in the iojap maize mutant Curr Genet 33 340 344 10.1007/s002940050345
37. JM Staub P Maliga 1992 Long regions of homologous DNA are incorporated into the tobacco plastid genome by transformation Plant Cell 4 39 45
38. JM Staub P Maliga 1993 Accumulation of D1 polypeptide in tobacco plastids is regulated via the untranslated region of the psbA mRNA EMBO J 12 601 606
39. JM Staub P Maliga 1994 Translation of psbA mRNA is regulated by light via the 5-untranslated region in tobacco plastids Plant J 6 547 553 10.1046/j.1365-313X.1994.6040547.x
40. JM Staub P Maliga 1995 Expression of a chimeric uidA gene indicates that polycistronic mRNAs are efficiently translated in tobacco plastids Plant J 7 845 848 10.1046/j.1365-313X.1995.07050845.x
41. JM Staub P Maliga 1995 Marker rescue from the Nicotiana tabacum plastid genome using a plastid Escherichia coli shuttle vector Mol Gen Genet 249 37 42 10.1007/BF00290233
42. WJ Stiekema F Heidekamp WG Dirkse J van Beckum P de Haan C ten Bosch JD Louwerse 1988 Molecular cloning and analysis of four potato tuber mRNAs Plant Mol Biol 11 255 269 10.1007/BF00027383
43. Z Svab P Maliga 1993 High-frequency plastid transformation in tobacco by selection for a chimeric aadA gene Proc Natl Acad Sci USA 90 913 917 10.1073/pnas.90.3.913
44. Z Svab P Hajdukiewicz P Maliga 1990 Stable transformation of plastids in higher plants Proc Natl Acad Sci USA 87 8526 8530 10.1073/pnas.87.21.8526
45. MR Thomas RJ Rose 1983 Plastid number and plastid ultrastructural changes associated with tobacco meesophyll protoplast culture and plant regeneration Planta 158 329 338 10.1007/BF00397335
46. T Tungsuchat H Kuroda J Narangajavana P Maliga 2006 Gene activation in plastids by the CRE site-specific recombinase Plant Mol Biol 61 711 718 10.1007/s11103-006-0044-5
47. D Verma H Daniell 2007 Chloroplast vector systems for biotechnology applications Plant Physiol 145 1129 1143 10.1104/pp.107.106690
48. T Wakasugi T Tsudzuki M Sugiura 2001 The genomics of land plant chloroplasts: gene content and alteration of genomic information by RNA editing Photosynth Res 70 107 118 10.1023/A:1013892009589
49. K Wostrikoff D Stern 2007 Rubisco large-subunit translation is autoregulated in response to its assembly state in tobacco chloroplasts Proc Natl Acad Sci USA 104 6466 6471 10.1073/pnas.0610586104
50. M Yukawa T Tsudzuki M Sugiura 2006 The chloroplast genome of Nicotiana sylvestris and Nicotiana tomentosiformis: complete sequencing confirms that the Nicotiana sylvestris progenitor is the maternal genome donor of Nicotiana tabacum Mol Genet Genomics 275 367 373 10.1007/s00438-005-0092-6
51. F Zhou D Karcher R Bock 2007 Identification of a plastid Intercistronic Expression Element (IEE) facilitating the expression of translatable monocistronic mRNAs from operons Plant J 52 961 972 10.1111/j.1365-313X.2007. 03261.x
52. F Zhou JA Badillo-Corona D Karcher N Gonzalez-Rabade K Piepenburg AM Borchers AP Maloney TA Kavanagh JC Gray R Bock 2008 High-level expression of human immunodeficiency virus antigens from the tobacco and tomato plastid genomes Plant Biotechnol J 6 897 913 10.1111/j.1467-7652.2008.00356.x
53. OV Zoubenko LA Allison Z Svab P Maliga 1994 Efficient targeting of foreign genes into the tobacco plastid genome Nucleic Acids Res 22 3819 3824 10.1093/nar/22.19.3819 (Pubitemid 24310088)
54. M Zuker JA Jaeger DH Turner 1991 A comparison of optimal and suboptimal RNA secondary structures predicted by free energy minimization with structures determined by phylogenetic comparison Nucleic Acids Res 19 2707 2714 10.1093/nar/19.10.2707 (Pubitemid 21896908)