Isolation and biochemical characterization of two lipases from a metagenomic library of China Holstein cow rumen

Biochemical and Biophysical Research Communications

Volumn 385, Issue 4, 2009, Pages 605-611

  Liu, Kailang ^a   Wang, Jiaqi ^a   Bu, Dengpan ^a   Zhao, Shengguo ^a   McSweeney, Chris ^b   Yu, Ping ^a   Li, Dan ^a  

^a INSTITUTE OF PLANT PROTECTION   (China)

^b CSIRO   (Australia)

Author keywords

Culture independent; Lipase; Metagenomics; Rumen

Indexed keywords

BACTERIAL ENZYME; CARBOXYLESTERASE; LAURIC ACID; PALMITIC ACID; RLIPE1 LIPASE; RLIPE2 LIPASE; STEARIC ACID; TRIACYLGLYCEROL LIPASE; UNCLASSIFIED DRUG;

ARTICLE; COW; ENZYME ACTIVITY; ENZYME ANALYSIS; ENZYME ISOLATION; ENZYME SPECIFICITY; HYDROLYSIS; LIPID METABOLISM; METAGENOMICS; NUCLEOTIDE SEQUENCE; PH; PHYLOGENY; PRIORITY JOURNAL; RUMINANT STOMACH; SEQUENCE HOMOLOGY; THERMOSTABILITY;

ACIDAMINOCOCCACEAE; AMINO ACID SEQUENCE; ANIMALS; CATTLE; FATTY ACIDS; FEMALE; GENE LIBRARY; GENOMICS; LIPASE; MOLECULAR SEQUENCE DATA; PHYLOGENY; RUMEN;

BACTERIA (MICROORGANISMS); THERMOSINUS CARBOXYDIVORANS;

EID: 67349209546     PISSN: 0006291X     EISSN: 10902104     Source Type: Journal    
DOI: 10.1016/j.bbrc.2009.05.110     Document Type: Article

References (24)

1. Lock A.L., and Bauman D.E. Modifies milk fat composition of dairy cows to enhance fatty acids beneficial to human health. Lipids 39 (2004) 1197-1206
2. Doreau M., Demeyer D.I., and Van Nevel C.J. Transformation and effects of unsaturated fatty acids in the rumen: consequences on milk fat secretion. In: Welch R.A.S., Burns D.J.W., Davis S.R., Popay A.I., and Prosser C.G. (Eds). Milk Composition, Production and Biotechnology (1997), CAB International, Wallinford, Oxfordshire 73-92
3. Harfoot C.G., and Hazlewood G.P. Lipid metabolism in the rumen. In: Hobson P.N., and Stewart C.S. (Eds). The Rumen Microbial Ecosystem (1997), Chapman & Hall, London 382-426
4. Kemp P., White R.M., and Lander D.J. The hydrogenation of unsaturated fatty acids by five bacterial isolates from the sheep rumen, including a new species. J. Gen. Microbiol. 90 (1975) 100-114
5. Kemp P., Lander D.J., and Gunstone F.D. The hydrogenation of some cis- and trans-octadecenoic acids to stearic acid by a rumen Fusocillus sp. Br. J. Nutr. 52 (1984) 165-170
6. Krause D., and Russell J.B. How many ruminal bacteria are there?. J. Dairy Sci. 79 (1996) 1467-1475
7. Stewart C.S., Flint H.J., and Bryant M.P. The rumen bacteria. In: Hobson P.N., and Stewart C.S. (Eds). The Rumen Microbial Ecosystem. second ed. (1998), Blackie Academic and Professionals, New York 10-72
8. Firkins J.L., and Yu Z. Characterisation and quantification of the microbial populations in the rumen. In: Sejrsen K., Hvelplund T., and Nielsen M.O. (Eds). Ruminant Physiology, Digestion, Metabolism and Impact of Nutrition on Gene Expression, Immunology and Stress (2006), Wageningen Academic Publishers, Wageningen 19-54
9. Russell J.B., and Rychlik J.L. Factors that alter rumen microbial ecology. Science 292 (2001) 1119-1122
10. McSweeney C.S., Denman S.E., Wright A.D.G., and Yu Z. Application of recent DNA/RNA-based techniques in rumen ecology. Asian-Aust. J. Anim. Sci. 20 (2007) 283-294
11. Rees H.C., Grant S., Jones B., Grant W.D., and Heaphy S. Detecting cellulase and esterase enzyme activities encoded by novel genes present in environmental DNA libraries. Extremophiles 7 (2003) 415-421
12. Voget S., Leggewie C., Uesbeck A., Raasch C., Jaeger K.E., and Streit W.R. Prospecting for novel biocatalysts in a soil metagenome. Appl. Environ. Microbiol. 69 (2003) 6235-6242
13. Ranjan R., Grover A., Kapardar R.K., and Sharma R. Isolation of novel lipolytic genes from uncultured bacteria of pond water. Biochem. Biophys. Res. Commun. 335 (2005) 57-65
14. Elend C., Schmeisser C., Leggewie C., Babiak P., Carballeira J.D., Steele H.L., Reymond J.L., Jaeger K.E., and Streit W.R. Isolation and biochemical characterization of two novel metagenome-derived esterases. Appl. Environ. Microbiol. 72 (2006) 3637-3645
15. Nam K.H., Kim M.Y., Kim S.J., Priyadarshi A., Lee W.H., and Hwang K.Y. Structural and functional analysis of a novel EstE5 belonging to the subfamily of hormone-sensitive lipase. Biochem. Biophys. Res. Commun. 379 (2009) 553-556
16. Zhu Y.X., Wang J.Q., Ma R.L., Huang L., and Dong Z.Y. Construction and analysis of rumen bacterial artificial chromosome library from a dairy cow rumen microflora. Acta Microbiol. Sinica 47 (2007) 213-217
17. Gisela K., and Jaeger K.E. Specific and sensitive plate assay for lipases. Appl. Environ. Microbiol. 53 (1987) 211-213
18. Sambrook J., and Russell D.W. Molecular Cloning: A Laboratory Manual. third ed. vols. 1-3 (2001), Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York
19. Altschul S.F., Madden T.L., Schaffer A.A., Zhang J., Zhang Z., Miller W., and Lipman D.J. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25 (1997) 3389-3402
20. Tatusov R.L., Galperin M.Y., Natale D.A., and Koonin E.V. The COG database: a tool for genome-scale analysis of protein functions and evolution. Nucleic Acids Res. 28 (2000) 33-36
21. Thompson J.D., Higgins D.G., and Gibson T.J. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22 (1994) 4673-4680
22. Kumar S., Dudley J., Nei M., and Tamura K. MEGA: a biologist-centric software for evolutionary analysis of DNA and protein sequences. Brief. Bioinform. 9 (2008) 299-306
23. Arpigny J.L., and Jaeger K.E. Bacterial lipolytic enzymes: classification and properties. Biochem. J. 343 (1999) 177-183
24. Sokolova T.G., Gonzalez J.M., Kostrikina N.A., Chernyh N.A., Tourova T.P., Kato C., Bonch-Osmolovskaya E.A., and Robb F.T. Carboxydibrachium pacificum gen. nov., sp. nov., a new anaerobic, thermophilic, CO-utilizing marine bacterium from Okinawa Trough. Int. J. Syst. Evol. Microbiol. 51 (2001) 141-149