Forest age correlates with fine-scale spatial structure of Matsutake mycorrhizas

Mycological Research

Volumn 113, Issue 5, 2009, Pages 541-551

  Amend, Anthony ^a   Keeley, Sterling ^b   Garbelotto, Matteo ^c  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b UNIVERSITY OF HAWAII   (United States)

^c UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

Fairy rings; Isolation by distance; Spatial autocorrelation; Spore dispersal; Succession

Indexed keywords

FUNGAL DNA;

AGE CLASS; DISPERSAL; FUNGUS; GENETIC MARKER; MUSHROOM; MYCORRHIZA; OLD-GROWTH FOREST; SPORULATION; SUCCESSION;

ANALYSIS OF VARIANCE; ARTICLE; GENETIC VARIABILITY; GENETICS; GENOTYPE; MYCORRHIZA; POPULATION DYNAMICS; POPULATION GENETICS; SINGLE NUCLEOTIDE POLYMORPHISM; TREE; TRICHOLOMA;

ANALYSIS OF VARIANCE; DNA, FUNGAL; GENETIC VARIATION; GENETICS, POPULATION; GENOTYPE; MYCORRHIZAE; POLYMORPHISM, SINGLE NUCLEOTIDE; POPULATION DYNAMICS; TREES; TRICHOLOMA;

BACTERIA (MICROORGANISMS); BASIDIOMYCOTA; TRICHOLOMA MATSUTAKE;

EID: 67349143379     PISSN: 09537562     EISSN: 14698102     Source Type: Journal    
DOI: 10.1016/j.mycres.2009.01.005     Document Type: Article

References (63)

1. Abesha E., Caetano-Anolles G., and Hoiland K. Population genetics and spatial structure of the fairy ring fungus Marasmius oreades in a Norwegian sand dune ecosystem. Mycologia 95 (2003) 1021-1031
2. Arnaud-Haond S., Duarte C.M., Alberto F., and Serrao E.A. Standardizing methods to address clonality in population studies. Molecular Ecology 16 (2007) 5115-5139
3. Agapow P.M., and Burt A. Indices of multilocus linkage disequilibrium. Molecular Ecology Notes 1 (2001) 101-102
4. Bergemann S.E., and Miller S.L. Size, distribution, and persistence of genets in local populations of the late-stage ectomycorrhizal basidiomycete, Russula brevipes. New Phytologist 156 (2002) 313-320
5. Bonello P., Bruns T.D., and Gardes M. Genetic structure of a natural population of the ectomycorrhizal fungus Suillus pungens. New Phytologist 138 (1998) 533-542
6. Carriconde F., Gryta H., Jargeat P., Mouhamadou B., and Gardes M. High sexual reproduction and limited contemporary dispersal in the ectomycorrhizal fungus Tricholoma scalpturatum: new insights from population genetics and spatial autocorrelation analysis. Molecular Ecology 17 (2008) 4433-4445
7. Cho I.H., Namgung H.J., Choi H.K., and Kim Y.S. Volatiles and key odorants in the pileus and stipe of pine-mushroom (Tricholoma matsutake Sing.). Food Chemistry 106 (2008) 71-76
8. Dahlberg A. Population ecology of Suillus variegatus in old Swedish Scots pine forests. Mycological Research 101 (1997) 47-54
9. Dahlberg A., Jonsson L., and Nylund J.E. Species diversity and distribution of biomass above and below ground among ectomycorrhizal fungi in an old-growth Norway spruce forest in south Sweden. Canadian Journal of Botany 75 (1997) 1323-1335
10. Dahlberg A., and Stenlid J. Population structure and dynamics in Suillus bovinus as indicated by spatial distribution of fungal clones. New Phytologist 115 (1990) 487-493
11. Dahlberg A., and Stenlid J. Size, distribution and biomass of genets in populations of Suillus bovinus (L.: Fr.) Roussel revealed by somatic incompatibility. New Phytologist 128 (1994) 225-234
12. Dahlberg A., and Stenlid J. Spatiotemporal patterns in ectomycorrhizal populations. Canadian Journal of Botany 73 (1995) S1222-S1230
13. Deacon J.W., and Fleming L.V. Interactions of ectomycorrhizal fungi. In: Allen M.F. (Ed). Mycorrhizal Functioning. an Integrative Plant-fungal Process (1992), Chapman & Hall, London 249-300
14. Dighton J., White J.F., and Oudemans P. The Fungal Community: its organization and role in the ecosystem (2005), CRC Press, Boca Raton, USA
15. Diniz-Filho J.A.F., and De Campos Telles M.P. Spatial autocorrelation analysis and the identification of operational units for conservation in continuous populations. Conservation Biology 16 (2002) 924-935
16. Double M.C., Peakall R., Beck N.R., and Cockburn A. Dispersal, philopatry, and infidelity: dissecting local genetic structure in superb fairy-wrens (Malurs cyaneus). Evolution 59 (2005) 625-635
17. Douhovnikoff V., and Dodd R.S. Intra-clonal variation and a similarity threshold for identification of clones: application to Salix exigua using AFLP molecular markers. TAG Theoretical and Applied Genetics 106 (2003) 1307-1315
18. Dowson C.G., Rayner A.D.M., and Boddy L. Spatial dynamics and interactions of the woodland fairy ring fungus, Clitocybe nebularis. New Phytologist 111 (1989) 699-705
19. Dunham S.M., Kretzer A., and Pfrender M.E. Characterization of Pacific golden chanterelle (Cantharellus formosus) genet size using co-dominant microsatellite markers. Molecular Ecology 12 (2003) 1607-1618
20. Dunham S.M., O'Dell T.E., and Molina R. Spatial analysis of within-population microsatellite variability reveals restricted gene flow in the Pacific golden chanterelle (Cantharellus formosus). Mycologia 98 (2006) 250-259
21. Fiore-Donno A.M., and Martin F. Populations of ectomycorrhizal Laccaria amethystina and Xerocomus spp. show contrasting colonization patterns in a mixed forest. New Phytologist 152 (2001) 533-542
22. Francis R., and Read D.J. The contributions of mycorrhizal fungi to the determination of plant community structure. Plant and Soil 159 (1994) 11-25
23. Garbelotto M., Gonthier P., Linzer R., Nicolotti G., and Otrosina W. A shift in nuclear state as the result of natural interspecific hybridization between two North American taxa of the basidiomycete complex Heterobasidion. Fungal Genetics and Biology 41 (2004) 1046-1051
24. Gherbi H., Delaruelle C., Selosse M.A., and Martin F. High genetic diversity in a population of the ectomycorrhizal basidiomycete Laccaria amethystina in a 150-year-old beech forest. Molecular Ecology 8 (1999) 2003-2013
25. Gill W.M., Guerin-Laguette A., Lapeyrie F., and Suzuki K. Matsutake-morphological evidence of ectomycorrhiza formation between Tricholoma matsutake and host roots in a pure Pinus densiflora forest stand. New Phytologist 147 (2000) 381-388
26. Glenn T.C., and Schable N.A. Isolating Microsatellite DNA Loci. Methods in Enzymology 395 (2005) 202-222
27. Gryta H., Debaud J.C., Effosse A., Gay G., and Marmeisse R. Fine-scale structure of populations of the ectomycorrhizal fungus Hebeloma cylindrosporum in coastal sand dune forest ecosystems. Molecular Ecology 6 (1997) 353-364
28. Gryta H., Debaud J.C., and Marmeisse R. Population dynamics of the symbiotic mushroom Hebeloma cylindrosporum: mycelial persistence and inbreeding. Heredity 84 (2000) 294-302
29. Guidot A., Debaud J.C., and Marmeisse R. Correspondence between genet diversity and spatial distribution of above- and below-ground populations of the ectomycorrhizal fungus Hebeloma cylindrosporum. Molecular Ecology 10 (2001) 1121-1131
30. Guidot A., Gryta H., Gourbiere F., Debaud J.C., and Marmeisse R. Forest habitat characteristics affect balance between sexual reproduction and clonal propagation of the ectomycorrhizal mushroom Hebeloma cylindrosporum. Oikos 99 (2002) 25-36
31. Guidot A., Lumini E., Debaud J.C., and Marmeisse R. The nuclear ribosomal DNA intergenic spacer as a target sequence to study intraspecific diversity of the ectomycorrhizal basidiomycete Hebeloma cylindrosporum directly on Pinus root systems. Applied and Environmental Microbiology 65 (1999) 903-909
32. Horton T.R., and Bruns T.D. The molecular revolution in ectomycorrhizal ecology: peeking into the black-box. Molecular Ecology 10 (2001) 1855-1871
33. Hosford D., Pilz D., Molina R., and Amaranthus R. Ecology and management of the commercially harvested American matsutake mushroom. [USDA General Technical Report No. PNW-GTR 412] (1997), USDA, Portland, OR
34. Koide R.T., and Dickie I.A. Effects of mycorrhizal fungi on plant populations. Plant and Soil 244 (2002) 307-317
35. Kretzer A.M., Dunham S., Molina R., and Spatafora J.W. Patterns of vegetative growth and gene flow in Rhizopogon vinicolor and R. vesiculosus (Boletales, Basidiomycota). Molecular Ecology 14 (2005) 2259-2268
36. Lian C., Hogetsu T., Matsushita N., Guerin-Laguette A., Suzuki K., and Yamada A. Development of microsatellite markers from an ectomycorrhizal fungus, Tricholoma matsutake, by an ISSR-suppression-PCR method. Mycorrhiza 13 (2003) 27-31
37. Lian C., Narimatsu M., Nara K., and Hogetsu T. Tricholoma matsutake in a natural Pinus densiflora forest: correspondence between above-and below-ground genets, association with multiple host trees and alteration of existing ectomycorrhizal communities. New Phytologist 171 (2006) 825-836
38. Mallett K.I., and Harrison L.M. The mating system of the fairy ring fungus Marasmius oreades and the genetic relationship of fairy rings. Canadian journal of botany 66 (1988) 1111-1116
39. Murata H., Ohta A., Yamada A., Narimatsu M., and Futamura N. Genetic mosaics in the massive persisting rhizosphere colony "shiro" of the ectomycorrhizal basidiomycete Tricholoma matsutake. Mycorrhiza 15 (2005) 505-512
40. Moore D., and Novak Fraser L. Essential Fungal Genetics (2002), Springer, New York, USA
41. Mueller-Dombois D., and Ellenberg H. Aims and Methods of Vegetation Ecology (1974), Blackburn Press, Caldwell, USA
42. Ogawa M. Microbial ecology of the mycorrhizal fungus, Tricholoma matsutake Ito et Imai (Sing.) in pine forest, 1: Fungal colony (Shiro) of Tricholoma matsutake. Bulletin of the Government Forest Experiment Station 272 (1975) 79-121 (in Japanese with English abstract)
43. Ogawa M. Microbial ecology of the mycorrhizal fungus Tricholoma matsutake Ito et Imai (Sing.) in pine forest, 2 Mycorrhiza formed by Tricholoma matsutake. Bulletin of the Government Forestry Experimental Station 278 (1975) 21-49 (in Japanese with English abstract)
44. Ohta A. Basidiospore germination of Tricholoma matsutake, 1: Effects of organic acids on swelling and germination of the basidiospores. Transactions of the Mycological Society of Japan 27 (1986) 167-173
45. Peabody R.B., Peabody D.C., and Sicard K.M. A genetic mosaic in the fruiting stage of Armillaria gallica. Fungal Genetics and Biology 29 (2000) 72-80
46. Peakall R.O.D., Smouse P.E., and Huff D.R. Evolutionary implications of allozyme and RAPD Variation in diploid populations of dioecious buffalograss Buchloe dactyloides. Molecular Ecology 4 (1995) 135-147
47. Peakall R., Ruibal M., and Lindenmayer D.B. Spatial autocorrelation analysis offers new insights into gene flow in the Australian Bush Rat, Rattus fuscipes. Evolution 57 (2003) 1182-1195
48. Peakall R.O.D., and Smouse P.E. Genalex 6: genetic analysis in Excel. Population genetic software for teaching and research. Molecular Ecology Notes 6 (2006) 288-295
49. Redecker D., Szaro T.M., Bowman R.J., and Bruns T.D. Small genets of Lactarius xanthogalactus, Russula cremoricolor and Amanita francheti in late-stage ectomycorrhizal successions. Molecular Ecology 10 (2001) 1025-1034
50. Redhead S. The pine mushroom industry in Canada and the United States: why it exists and where it is going. In: Palm M.A., and Chapela I.H. (Eds). Mycology in Sustainable Development: Expanding Concepts and Vanishing Borders (1997), Parkway Publishers, North Carolina 11-46
51. Rizzo D.M., and May G. Armillaria ostoyae (Basidiomycotina). Microbiology 140 (1994) 2115-2124
52. Rogstad S.H., Keane B., and Beresh J. Genetic variation across VNTR loci in central North American Taraxacum surveyed at different spatial scales. Plant Ecology 161 (2002) 111-121
53. Rousset F., and Raymond M. GENEPOP (version 1.2): population genetics software for exact tests and ecumenicism. Journal of Heredity 86 (1995) 248-249
54. Sawyer N.A., Chambers S.M., and Cairney J.W.G. Molecular investigation of genet distribution and genetic variation of Cortinarius rotundisporus in eastern Australian sclerophyll forests. New Phytologist 142 (1999) 561-568
55. White T.J., Bruns T., Lee S., and Taylor J. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis M.A., Gelfand D.H., Sninsky J.J., and White T.J. (Eds). PCR protocols: a guide to methods and applications (1990), Academic Press, Inc., New York 315-322
56. Weir B.S., and Cockerham C.C. Estimating F-statistics for the analysis of population structure. Evolution 38 (1984) 1358-1370
57. Wood W.F., and Lefevre C.K. Changing volatile compounds from mycelium and sporocarp of American matsutake mushroom, Tricholoma magnivelare. Biochemical Systematics and Ecology 35 (2007) 634-636
58. Xu J. Fundamentals of fungal molecular population genetic analyses. Current Issues in Molecular Biology 8 (2006) 75-90
59. Xu J., Guo H., and Yang Z.L. Single nucleotide polymorphisms in the ectomycorrhizal mushroom Tricholoma matsutake. Microbiology 153 (2007) 2002-2012
60. Xu J., Sha T.A.O., Li Y., Zhao Z., and Yang Z. Recombination and genetic differentiation among natural populations of the ectomycorrhizal mushroom Tricholoma matsutake from southwestern China. Molecular Ecology 17 (2008) 1238-1247
61. Yajima I., Yanai T., Nakamura M., Sakakibara H., and Hayashi K. volatile flavor compounds of Matsutake - Tricholoma matsutake (Ito et. Imai). Sing. Agricultural and Biological Chemistry 45 (1981) 373-377
62. Yun W., Hall I.R., and Evans L.A. Ectomycorrhizal fungi with edible fruiting bodies. 1. Tricholoma matsutake and related fungi. Economic Botany 51 (1997) 311-327
63. Yun W., and Hall I.R. Edible ectomycorrhizal mushrooms: challenges and achievements. Canadian Journal of Botany 82 (2004) 1063-1073