-
1
-
-
34547604477
-
Crystal structure of the Murray Valley encephalitis virus NS5 methyltransferase domain in complex with cap analogues
-
Assenberg R., Ren J., Verma A., Walter T.S., Alderton D., Hurrelbrink R.J., Fuller S.D., Bressanelli S., Owens R.J., Stuart D.I., and Grimes J.M. Crystal structure of the Murray Valley encephalitis virus NS5 methyltransferase domain in complex with cap analogues. J. Gen. Virol. 88 (2007) 2228-2236
-
(2007)
J. Gen. Virol.
, vol.88
, pp. 2228-2236
-
-
Assenberg, R.1
Ren, J.2
Verma, A.3
Walter, T.S.4
Alderton, D.5
Hurrelbrink, R.J.6
Fuller, S.D.7
Bressanelli, S.8
Owens, R.J.9
Stuart, D.I.10
Grimes, J.M.11
-
3
-
-
0017226202
-
Aurintricarboxylic acid is a nonspecific enzyme inhibitor
-
Bina-Stein M., and Tritton T.R. Aurintricarboxylic acid is a nonspecific enzyme inhibitor. Mol. Pharmacol. 12 (1976) 191-193
-
(1976)
Mol. Pharmacol.
, vol.12
, pp. 191-193
-
-
Bina-Stein, M.1
Tritton, T.R.2
-
4
-
-
57749204973
-
Recognition of RNA cap in the Wesselsbron virus NS5 methyltransferase domain: implications for RNA capping mechanisms in Flavivirus
-
Bollati M., Milani M., Mastrangelo E., Ricagno S., Tedeschi G., Nonnis S., Decroly E., Selisko B., de Lamballerie X., Coutard B., Canard B., and Bolognesi M. Recognition of RNA cap in the Wesselsbron virus NS5 methyltransferase domain: implications for RNA capping mechanisms in Flavivirus. J. Mol. Biol. 385 (2009) 140-152
-
(2009)
J. Mol. Biol.
, vol.385
, pp. 140-152
-
-
Bollati, M.1
Milani, M.2
Mastrangelo, E.3
Ricagno, S.4
Tedeschi, G.5
Nonnis, S.6
Decroly, E.7
Selisko, B.8
de Lamballerie, X.9
Coutard, B.10
Canard, B.11
Bolognesi, M.12
-
5
-
-
1342269713
-
Superior 5′ homogeneity of RNA from ATP-initiated transcription under the T7 φ 2.5 promoter
-
Coleman T.M., Wang G., and Huang F. Superior 5′ homogeneity of RNA from ATP-initiated transcription under the T7 φ 2.5 promoter. Nucleic Acids Res. 32 (2004) e14
-
(2004)
Nucleic Acids Res.
, vol.32
-
-
Coleman, T.M.1
Wang, G.2
Huang, F.3
-
6
-
-
0018001339
-
Simultaneous analysis of families of sigmoidal curves: application to bioassay, radioligand assay, and physiological dose-response curves
-
DeLean A., Munson P.J., and Rodbard D. Simultaneous analysis of families of sigmoidal curves: application to bioassay, radioligand assay, and physiological dose-response curves. Am. J. Physiol. 235 (1978) e97-e102
-
(1978)
Am. J. Physiol.
, vol.235
-
-
DeLean, A.1
Munson, P.J.2
Rodbard, D.3
-
7
-
-
34247564968
-
Distinct RNA elements confer specificity to flavivirus RNA cap methylation events
-
Dong H., Ray D., Ren S., Zhang B., Puig-Basagoiti F., Takagi Y., Ho C.K., Li H., and Shi P.-Y. Distinct RNA elements confer specificity to flavivirus RNA cap methylation events. J. Virol. 81 (2007) 4412-4421
-
(2007)
J. Virol.
, vol.81
, pp. 4412-4421
-
-
Dong, H.1
Ray, D.2
Ren, S.3
Zhang, B.4
Puig-Basagoiti, F.5
Takagi, Y.6
Ho, C.K.7
Li, H.8
Shi, P.-Y.9
-
8
-
-
42449160175
-
West Nile virus methyltransferase catalyzes two methylations of the viral RNA cap through a substrate repositioning mechanism
-
Dong H., Ren S., Zhang B., Zhou Y., Puig-Basagoiti F., Li H., and Shi P.Y. West Nile virus methyltransferase catalyzes two methylations of the viral RNA cap through a substrate repositioning mechanism. J. Virol. 82 (2008) 4295-4307
-
(2008)
J. Virol.
, vol.82
, pp. 4295-4307
-
-
Dong, H.1
Ren, S.2
Zhang, B.3
Zhou, Y.4
Puig-Basagoiti, F.5
Li, H.6
Shi, P.Y.7
-
9
-
-
50049109958
-
Flavivirus methyltransferase: a novel antiviral target
-
Dong H., Zhang B., and Shi P.Y. Flavivirus methyltransferase: a novel antiviral target. Antiviral Res. 80 (2008) 1-10
-
(2008)
Antiviral Res.
, vol.80
, pp. 1-10
-
-
Dong, H.1
Zhang, B.2
Shi, P.Y.3
-
10
-
-
0037013858
-
An RNA cap (nucleoside-2′-O-)-methyltransferase in the flavivirus RNA polymerase NS5: crystal structure and functional characterization
-
Egloff M.P., Benarroch D., Selisko B., Romette J.L., and Canard B. An RNA cap (nucleoside-2′-O-)-methyltransferase in the flavivirus RNA polymerase NS5: crystal structure and functional characterization. EMBO J. 21 (2002) 2757-2768
-
(2002)
EMBO J.
, vol.21
, pp. 2757-2768
-
-
Egloff, M.P.1
Benarroch, D.2
Selisko, B.3
Romette, J.L.4
Canard, B.5
-
11
-
-
34548148632
-
Structural and functional analysis of methylation and 5′-RNA sequence requirements of short capped RNAs by the methyltransferase domain of Dengue virus NS5
-
Egloff M.P., Decroly E., Malet H., Selisko B., Benarroch D., Ferron F., and Canard B. Structural and functional analysis of methylation and 5′-RNA sequence requirements of short capped RNAs by the methyltransferase domain of Dengue virus NS5. J. Mol. Biol. 372 (2007) 723-736
-
(2007)
J. Mol. Biol.
, vol.372
, pp. 723-736
-
-
Egloff, M.P.1
Decroly, E.2
Malet, H.3
Selisko, B.4
Benarroch, D.5
Ferron, F.6
Canard, B.7
-
12
-
-
0004250845
-
-
Lippicott Williams & Wilkins, Philadelphia, PA
-
Fields B.N., Howley P.M., Griffin D.E., Lamb R.A., Martin M.A., Roizman B., Straus S.E., and Knipe D.M. Fields Virology. 4th ed. (2001), Lippicott Williams & Wilkins, Philadelphia, PA
-
(2001)
Fields Virology. 4th ed.
-
-
Fields, B.N.1
Howley, P.M.2
Griffin, D.E.3
Lamb, R.A.4
Martin, M.A.5
Roizman, B.6
Straus, S.E.7
Knipe, D.M.8
-
13
-
-
0000125764
-
A new model for calculating atomic charges in molecules
-
Gasteiger J., and Marsili M. A new model for calculating atomic charges in molecules. Tetrahedron Lett. (1978) 3181-3184
-
(1978)
Tetrahedron Lett.
, pp. 3181-3184
-
-
Gasteiger, J.1
Marsili, M.2
-
14
-
-
0021871375
-
A computational procedure for determining energetically favourable binding sites on biologically important macromolecules
-
Goodford P.J. A computational procedure for determining energetically favourable binding sites on biologically important macromolecules. J. Med. Chem. 28 (1985) 849-857
-
(1985)
J. Med. Chem.
, vol.28
, pp. 849-857
-
-
Goodford, P.J.1
-
15
-
-
18044367101
-
Dengue fever: new paradigms for a changing epidemiology
-
Guha-Sapir D., and Schimmer B. Dengue fever: new paradigms for a changing epidemiology. Emerg. Themes Epidemiol. 2 (2005) 1
-
(2005)
Emerg. Themes Epidemiol.
, vol.2
, pp. 1
-
-
Guha-Sapir, D.1
Schimmer, B.2
-
16
-
-
58149476178
-
Aurintricarboxylic acid inhibits influenza virus neuraminidase
-
Hung H.-C., Tseng C.-P., Yang J.-M., Ju Y.-W., Tseng S.-N., Chen Y.-F., Chao Y.-S., Hsiehd H.-P., Shih S.-R., and Hsu J.T.-A. Aurintricarboxylic acid inhibits influenza virus neuraminidase. Antiviral Res. 81 (2009) 123-131
-
(2009)
Antiviral Res.
, vol.81
, pp. 123-131
-
-
Hung, H.-C.1
Tseng, C.-P.2
Yang, J.-M.3
Ju, Y.-W.4
Tseng, S.-N.5
Chen, Y.-F.6
Chao, Y.-S.7
Hsiehd, H.-P.8
Shih, S.-R.9
Hsu, J.T.-A.10
-
18
-
-
35348920605
-
Virtual screening and bioassay study of novel inhibitors for Dengue virus mRNA cap (nucleoside-2′O)-methyltransferase
-
Luzhkov V.B., Selisko B., Nordqvist A., Peyrane F., Decroly E., Alvarez K., Karlen A., Canard B., and Qvist J. Virtual screening and bioassay study of novel inhibitors for Dengue virus mRNA cap (nucleoside-2′O)-methyltransferase. Bioorg. Med. Chem. 15 (2007) 7795-7802
-
(2007)
Bioorg. Med. Chem.
, vol.15
, pp. 7795-7802
-
-
Luzhkov, V.B.1
Selisko, B.2
Nordqvist, A.3
Peyrane, F.4
Decroly, E.5
Alvarez, K.6
Karlen, A.7
Canard, B.8
Qvist, J.9
-
19
-
-
34249845069
-
Crystal structure of the RNA polymerase domain of the West Nile virus non-structural protein 5
-
Malet H., Egloff M.-P., Selisko B., Butcher R.E., Wright P.J., Roberts M., Gruez A., Sulzenbacher G., Vonrhein C., Bricogne G., Mackenzie J.M., Khromykh A.A., Davidson A.D., and Canard B. Crystal structure of the RNA polymerase domain of the West Nile virus non-structural protein 5. J. Biol. Chem. 282 (2007) 10678-10689
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 10678-10689
-
-
Malet, H.1
Egloff, M.-P.2
Selisko, B.3
Butcher, R.E.4
Wright, P.J.5
Roberts, M.6
Gruez, A.7
Sulzenbacher, G.8
Vonrhein, C.9
Bricogne, G.10
Mackenzie, J.M.11
Khromykh, A.A.12
Davidson, A.D.13
Canard, B.14
-
20
-
-
0008025298
-
Convergence properties of free energy calculations: α-cyclodextrin complexes as a case study
-
Mark A.E., van Helden S.P., Smith P.E., Janssen L.H.M., and van Gunsteren W.F. Convergence properties of free energy calculations: α-cyclodextrin complexes as a case study. J. Am. Chem. Soc. 116 (1994) 6293-6302
-
(1994)
J. Am. Chem. Soc.
, vol.116
, pp. 6293-6302
-
-
Mark, A.E.1
van Helden, S.P.2
Smith, P.E.3
Janssen, L.H.M.4
van Gunsteren, W.F.5
-
21
-
-
34249779250
-
Structural bases for substrate recognition and activity in Meaban virus nucleoside-2′-O-methyltransferase
-
Mastrangelo E., Bollati M., Milani M., Selisko B., Peyrane F., Canard B., Grard G., de Lamballerie X., and Bolognesi M. Structural bases for substrate recognition and activity in Meaban virus nucleoside-2′-O-methyltransferase. Protein Sci. 16 (2007) 1133-1145
-
(2007)
Protein Sci.
, vol.16
, pp. 1133-1145
-
-
Mastrangelo, E.1
Bollati, M.2
Milani, M.3
Selisko, B.4
Peyrane, F.5
Canard, B.6
Grard, G.7
de Lamballerie, X.8
Bolognesi, M.9
-
22
-
-
11644261806
-
Automated docking using a lamarckian genetic algorithm and empirical binding free energy function
-
Morris G.M., Goodsell D.S., Halliday R.S., Huey R., Hart W.E., Belew R.K., and Olson A.J. Automated docking using a lamarckian genetic algorithm and empirical binding free energy function. J. Comput. Chem. 19 (1998) 1639-1662
-
(1998)
J. Comput. Chem.
, vol.19
, pp. 1639-1662
-
-
Morris, G.M.1
Goodsell, D.S.2
Halliday, R.S.3
Huey, R.4
Hart, W.E.5
Belew, R.K.6
Olson, A.J.7
-
23
-
-
33947397199
-
Aurintricarboxylic acid inhibits the early stage of vaccinia virus replication by targeting both cellular and viral factors
-
Myskiw C., Deschambault Y., Jefferies K., He R., and Cao J. Aurintricarboxylic acid inhibits the early stage of vaccinia virus replication by targeting both cellular and viral factors. J. Virol. 81 (2007) 3027-3032
-
(2007)
J. Virol.
, vol.81
, pp. 3027-3032
-
-
Myskiw, C.1
Deschambault, Y.2
Jefferies, K.3
He, R.4
Cao, J.5
-
24
-
-
34047219728
-
High-yield production of short GrppA- and 7MeGpppA-capped RNAs and HPLC-monitoring of methyltransfer reactions at the guanine-N7 and adenosine-2′ O positions
-
Peyrane F., Selisko B., Decroly E., Vasseur J.J., Benarroch D., Canard B., and Alvarez K. High-yield production of short GrppA- and 7MeGpppA-capped RNAs and HPLC-monitoring of methyltransfer reactions at the guanine-N7 and adenosine-2′ O positions. Nucleic Acids Res. 35 (2007) e26
-
(2007)
Nucleic Acids Res.
, vol.35
-
-
Peyrane, F.1
Selisko, B.2
Decroly, E.3
Vasseur, J.J.4
Benarroch, D.5
Canard, B.6
Alvarez, K.7
-
25
-
-
33748669852
-
West Nile virus 5′-cap structure is formed by sequential guanine N-7 and ribose 2′-O methylations by nonstructural protein 5
-
Ray D., Shah A., Tilgner M., Guo Y., Zhao Y., Dong H., Deas T.S., Zhou Y., Li H., and Shi P.Y. West Nile virus 5′-cap structure is formed by sequential guanine N-7 and ribose 2′-O methylations by nonstructural protein 5. J. Virol. 80 (2006) 8362-8370
-
(2006)
J. Virol.
, vol.80
, pp. 8362-8370
-
-
Ray, D.1
Shah, A.2
Tilgner, M.3
Guo, Y.4
Zhao, Y.5
Dong, H.6
Deas, T.S.7
Zhou, Y.8
Li, H.9
Shi, P.Y.10
-
26
-
-
57149088067
-
Molecular targets for flavivirus drug discovery
-
Sampath A., and Padmanabhan R. Molecular targets for flavivirus drug discovery. Antiviral Res. 81 (2009) 6-15
-
(2009)
Antiviral Res.
, vol.81
, pp. 6-15
-
-
Sampath, A.1
Padmanabhan, R.2
-
27
-
-
0345196609
-
Specific interaction of aurintricarboxylic acid with the human immunodeficiency virus/CD4 cell receptor
-
Schols D., Baba M., Pauwels R., Desmyter J., and De Clercq E. Specific interaction of aurintricarboxylic acid with the human immunodeficiency virus/CD4 cell receptor. Proc. Natl. Acad. Sci. U.S.A. 86 (1989) 3322-3326
-
(1989)
Proc. Natl. Acad. Sci. U.S.A.
, vol.86
, pp. 3322-3326
-
-
Schols, D.1
Baba, M.2
Pauwels, R.3
Desmyter, J.4
De Clercq, E.5
-
28
-
-
27344454932
-
GROMACS: fast, flexible and free
-
van der Spoel D., Lindahl E., Hess B., Groenhof G., Mark A.E., and Berendsen H.J.C. GROMACS: fast, flexible and free. J. Comput. Chem. 26 (2005) 1701-1718
-
(2005)
J. Comput. Chem.
, vol.26
, pp. 1701-1718
-
-
van der Spoel, D.1
Lindahl, E.2
Hess, B.3
Groenhof, G.4
Mark, A.E.5
Berendsen, H.J.C.6
-
29
-
-
34247610261
-
Crystal structure of the Dengue virus RNA-dependent RNA polymerase catalytic domain at 1.85-angstrom resolution
-
Yap T.L., Xu T., Chen Y.L., Malet H., Egloff M.P., Canard B., Vasudevan S.G., and Lescar J. Crystal structure of the Dengue virus RNA-dependent RNA polymerase catalytic domain at 1.85-angstrom resolution. J. Virol. 81 (2007) 4753-4765
-
(2007)
J. Virol.
, vol.81
, pp. 4753-4765
-
-
Yap, T.L.1
Xu, T.2
Chen, Y.L.3
Malet, H.4
Egloff, M.P.5
Canard, B.6
Vasudevan, S.G.7
Lescar, J.8
-
30
-
-
34247113349
-
Structure and function of flavivirus NS5 methyltransferase
-
Zhou Y., Ray D., Zhao Y., Dong H., Ren S., Li Z., Guo Y., Bernard K.A., Shi P.Y., and Li H. Structure and function of flavivirus NS5 methyltransferase. J. Virol. 81 (2007) 3891-3903
-
(2007)
J. Virol.
, vol.81
, pp. 3891-3903
-
-
Zhou, Y.1
Ray, D.2
Zhao, Y.3
Dong, H.4
Ren, S.5
Li, Z.6
Guo, Y.7
Bernard, K.A.8
Shi, P.Y.9
Li, H.10
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