-
1
-
-
33845547793
-
Multilocus sequence typing supports the hypothesis that cow- and human-associated Salmonella isolates represent distinct and overlapping populations
-
Alcaine, S. D., Y. Soyer, L. D. Warnick, W. L. Su, S. Sukhnanand, J. Richards, E. D. Fortes, P. McDonough, T. P. Root, N. B. Dumas, Y. Grohn, and M. Wiedmann. 2006. Multilocus sequence typing supports the hypothesis that cow- and human-associated Salmonella isolates represent distinct and overlapping populations. Appl. Environ. Microbiol. 72:7575-7585.
-
(2006)
Appl. Environ. Microbiol.
, vol.72
, pp. 7575-7585
-
-
Alcaine, S.D.1
Soyer, Y.2
Warnick, L.D.3
Su, W.L.4
Sukhnanand, S.5
Richards, J.6
Fortes, E.D.7
McDonough, P.8
Root, T.P.9
Dumas, N.B.10
Grohn, Y.11
Wiedmann, M.12
-
2
-
-
25844441743
-
Ceftiofur-resistant Salmonella strains isolated from dairy farms represent multiple widely distributed subtypes that evolved by independent horizontal gene transfer
-
Alcaine, S. D., S. S. Sukhnanand, L. D. Warnick, W. L. Su, P. McGann, P. McDonough, and M. Wiedmann. 2005. Ceftiofur-resistant Salmonella strains isolated from dairy farms represent multiple widely distributed subtypes that evolved by independent horizontal gene transfer. Antimicrob. Agents Chemother. 49:4061-4067.
-
(2005)
Antimicrob. Agents Chemother.
, vol.49
, pp. 4061-4067
-
-
Alcaine, S.D.1
Sukhnanand, S.S.2
Warnick, L.D.3
Su, W.L.4
McGann, P.5
McDonough, P.6
Wiedmann, M.7
-
3
-
-
0033555906
-
Tandem repeats finder: A program to analyze DNA sequences
-
DOI 10.1093/nar/27.2.573
-
Benson, G. 1999. Tandem repeats finder: a program to analyze DNA sequences. Nucleic Acids Res. 27:573-580. (Pubitemid 29210025)
-
(1999)
Nucleic Acids Research
, vol.27
, Issue.2
, pp. 573-580
-
-
Benson, G.1
-
4
-
-
49949099468
-
Impact of compounding error on strategies for subtyping pathogenic bacteria
-
Call, D. R., L. Orfe, M. A. Davis, S. Lafrentz, and M. S. Kang. 2008. Impact of compounding error on strategies for subtyping pathogenic bacteria. Foodborne Pathog. Dis. 5:505-516.
-
(2008)
Foodborne Pathog. Dis.
, vol.5
, pp. 505-516
-
-
Call, D.R.1
Orfe, L.2
Davis, M.A.3
Lafrentz, S.4
Kang, M.S.5
-
5
-
-
42949120621
-
Outbreak of multidrug-resistant Salmonella enterica serotype Newport infections associated with consumption of unpasteurized Mexican-style aged cheese - Illinois, March 2006-April 2007
-
Centers for Disease Control and Prevention
-
Centers for Disease Control and Prevention. 2008. Outbreak of multidrug-resistant Salmonella enterica serotype Newport infections associated with consumption of unpasteurized Mexican-style aged cheese - Illinois, March 2006-April 2007. MMWR Morb. Mortal. Wkly. Rep. 57:432-435.
-
(2008)
MMWR Morb. Mortal. Wkly. Rep.
, vol.57
, pp. 432-435
-
-
-
6
-
-
0037188854
-
Outbreak of multidrug-resistant Salmonella Newport - United States, January-April 2002
-
Centers for Disease Control and Prevention
-
Centers for Disease Control and Prevention. 2002. Outbreak of multidrug-resistant Salmonella Newport - United States, January-April 2002. MMWR Morb. Mortal. Wkly. Rep. 51:545-548.
-
(2002)
MMWR Morb. Mortal. Wkly. Rep.
, vol.51
, pp. 545-548
-
-
-
7
-
-
33645711624
-
PulseNet USA: A five-year update
-
Gerner-Smidt, P., K. Hise, J. Kincaid, S. Hunter, S. Rolando, E. Hyytia-Trees, E. M. Ribot, and B. Swaminathan. 2006. PulseNet USA: a five-year update. Foodborne Pathog. Dis. 3:9-19.
-
(2006)
Foodborne Pathog. Dis.
, vol.3
, pp. 9-19
-
-
Gerner-Smidt, P.1
Hise, K.2
Kincaid, J.3
Hunter, S.4
Rolando, S.5
Hyytia-Trees, E.6
Ribot, E.M.7
Swaminathan, B.8
-
8
-
-
0034757959
-
Determining confidence intervals when measuring genetic diversity and the discriminatory abilities of typing methods for microorganisms
-
Grundmann, H., S. Hori, and G. Tanner. 2001. Determining confidence intervals when measuring genetic diversity and the discriminatory abilities of typing methods for microorganisms. J. Clin. Microbiol. 39:4190-4192.
-
(2001)
J. Clin. Microbiol.
, vol.39
, pp. 4190-4192
-
-
Grundmann, H.1
Hori, S.2
Tanner, G.3
-
9
-
-
0346256761
-
Emergence of multidrug-resistant Salmonella enterica serotype Newport infections resistant to expanded-spectrum cephalosporins in the United States
-
Gupta, A., J. Fontana, C. Crowe, B. Bolstorff, A. Stout, S. Van Duyne, M. P. Hoekstra, J. M. Whichard, T. J. Barrett, and F. J. Angulo. 2003. Emergence of multidrug-resistant Salmonella enterica serotype Newport infections resistant to expanded-spectrum cephalosporins in the United States. J. Infect. Dis. 188:1707-1716.
-
(2003)
J. Infect. Dis.
, vol.188
, pp. 1707-1716
-
-
Gupta, A.1
Fontana, J.2
Crowe, C.3
Bolstorff, B.4
Stout, A.5
Van Duyne, S.6
Hoekstra, M.P.7
Whichard, J.M.8
Barrett, T.J.9
Angulo, F.J.10
-
10
-
-
0023738045
-
Numerical index of the discriminatory ability of typing systems: An application of Simpson's index of diversity
-
Hunter, P. R., and M. A. Gaston. 1988. Numerical index of the discriminatory ability of typing systems: an application of Simpson's index of diversity. J. Clin. Microbiol. 26:2465-2466.
-
(1988)
J. Clin. Microbiol.
, vol.26
, pp. 2465-2466
-
-
Hunter, P.R.1
Gaston, M.A.2
-
11
-
-
85046911274
-
Human multidrug-resistant Salmonella Newport infections, Wisconsin, 2003-2005
-
Karon, A. E., J. R. Archer, M. J. Sotir, T. A. Monson, and J. J. Kazmierczak. 2007. Human multidrug-resistant Salmonella Newport infections, Wisconsin, 2003-2005. Emerg. Infect. Dis. 13:1777-1780.
-
(2007)
Emerg. Infect. Dis.
, vol.13
, pp. 1777-1780
-
-
Karon, A.E.1
Archer, J.R.2
Sotir, M.J.3
Monson, T.A.4
Kazmierczak, J.J.5
-
12
-
-
0037387157
-
DNA fingerprinting of Salmonella enterica subsp. enterica serovar Typhimurium with emphasis on phage type DT104 based on variable number of tandem repeat loci
-
Lindstedt, B. A., E. Heir, E. Gjernes, and G. Kapperud. 2003. DNA fingerprinting of Salmonella enterica subsp. enterica serovar Typhimurium with emphasis on phage type DT104 based on variable number of tandem repeat loci. J. Clin. Microbiol. 41:1469-1479.
-
(2003)
J. Clin. Microbiol.
, vol.41
, pp. 1469-1479
-
-
Lindstedt, B.A.1
Heir, E.2
Gjernes, E.3
Kapperud, G.4
-
13
-
-
5344254628
-
Multiple-locus variable-number tandem-repeats analysis of Salmonella enterica subsp. enterica serovar Typhimurium using PCR multiplexing and multicolor capillary electrophoresis
-
Lindstedt, B. A., T. Vardund, L. Aas, and G. Kapperud. 2004. Multiple-locus variable-number tandem-repeats analysis of Salmonella enterica subsp. enterica serovar Typhimurium using PCR multiplexing and multicolor capillary electrophoresis. J. Microbiol. Methods 59:163-172.
-
(2004)
J. Microbiol. Methods
, vol.59
, pp. 163-172
-
-
Lindstedt, B.A.1
Vardund, T.2
Aas, L.3
Kapperud, G.4
-
14
-
-
33745728380
-
Emergence of multidrug-resistant Salmonella enterica serotype Newport in Minnesota
-
Lopes, V. C., S. D. Wedel, J. B. Bender, K. E. Smith, F. T. Leano, D. J. Boxrud, D. C. Lauer, B. T. Velayudhan, and K. V. Nagaraja. 2006. Emergence of multidrug-resistant Salmonella enterica serotype Newport in Minnesota. Clin. Infect. Dis. 43:210-213.
-
(2006)
Clin. Infect. Dis.
, vol.43
, pp. 210-213
-
-
Lopes, V.C.1
Wedel, S.D.2
Bender, J.B.3
Smith, K.E.4
Leano, F.T.5
Boxrud, D.J.6
Lauer, D.C.7
Velayudhan, B.T.8
Nagaraja, K.V.9
-
15
-
-
4143150937
-
Supplement 2002 (nono. 46. 46) to the Kauffmann-White scheme
-
Popoff, M. Y., J. Bockemuhl, and L. L. Gheesling. 2004. Supplement 2002 (nono. 46. 46) to the Kauffmann-White scheme. Res. Microbiol. 155:568-570.
-
(2004)
Res. Microbiol.
, vol.155
, pp. 568-570
-
-
Popoff, M.Y.1
Bockemuhl, J.2
Gheesling, L.L.3
-
16
-
-
10844243674
-
Variable number of tandem repeats in Salmonella enterica subsp. enterica for typing purposes
-
Ramisse, V., P. Houssu, E. Hernandez, F. Denoeud, V. Hilaire, O. Lisanti, F. Ramisse, J. D. Cavallo, and G. Vergnaud. 2004. Variable number of tandem repeats in Salmonella enterica subsp. enterica for typing purposes. J. Clin. Microbiol. 42:5722-5730.
-
(2004)
J. Clin. Microbiol.
, vol.42
, pp. 5722-5730
-
-
Ramisse, V.1
Houssu, P.2
Hernandez, E.3
Denoeud, F.4
Hilaire, V.5
Lisanti, O.6
Ramisse, F.7
Cavallo, J.D.8
Vergnaud, G.9
-
17
-
-
33645707707
-
Standardization of pulsed-field gel electrophoresis protocols for the subtyping of Escherichia coli O157:H7, Salmonella, and Shigella for PulseNet
-
Ribot, E. M., M. A. Fair, R. Gautom, D. N. Cameron, S. B. Hunter, B. Swaminathan, and T. J. Barrett. 2006. Standardization of pulsed-field gel electrophoresis protocols for the subtyping of Escherichia coli O157:H7, Salmonella, and Shigella for PulseNet. Foodborne Pathog. Dis. 3:59-67.
-
(2006)
Foodborne Pathog. Dis.
, vol.3
, pp. 59-67
-
-
Ribot, E.M.1
Fair, M.A.2
Gautom, R.3
Cameron, D.N.4
Hunter, S.B.5
Swaminathan, B.6
Barrett, T.J.7
-
18
-
-
0033990048
-
Primer3 on the WWW for general users and for biologist programmers
-
Rozen, S., and H. Skaletsy. 2000. Primer3 on the WWW for general users and for biologist programmers. Methods Mol. Biol. 132:365-386.
-
(2000)
Methods Mol. Biol.
, vol.132
, pp. 365-386
-
-
Rozen, S.1
Skaletsy, H.2
-
19
-
-
33746156048
-
Highly resistant Salmonella Newport-MDRAmpC transmitted through the domestic US food supply: A FoodNet case-control study of sporadic Salmonella Newport infections, 2002-2003
-
Varma, J. K., R. Marcus, S. A. Stenzel, S. S. Hanna, S. Gettner, B. J. Anderson, T. Hayes, B. Shiferaw, T. L. Crume, K. Joyce, K. E. Fullerton, A. C. Voetsch, and F. J. Angulo. 2006. Highly resistant Salmonella Newport-MDRAmpC transmitted through the domestic US food supply: a FoodNet case-control study of sporadic Salmonella Newport infections, 2002-2003. J. Infect. Dis. 194:222-230.
-
(2006)
J. Infect. Dis.
, vol.194
, pp. 222-230
-
-
Varma, J.K.1
Marcus, R.2
Stenzel, S.A.3
Hanna, S.S.4
Gettner, S.5
Anderson, B.J.6
Hayes, T.7
Shiferaw, B.8
Crume, T.L.9
Joyce, K.10
Fullerton, K.E.11
Voetsch, A.C.12
Angulo, F.J.13
-
20
-
-
33750959626
-
Variable-number tandem repeats that are useful in genotyping isolates of Salmonella enterica subsp. enterica serovars Typhimurium and Newport
-
Witonski, D., R. Stefanova, A. Ranganathan, G. E. Schutze, K. D. Eisenach, and M. D. Cave. 2006. Variable-number tandem repeats that are useful in genotyping isolates of Salmonella enterica subsp. enterica serovars Typhimurium and Newport. J. Clin. Microbiol. 44:3849-3854.
-
(2006)
J. Clin. Microbiol.
, vol.44
, pp. 3849-3854
-
-
Witonski, D.1
Stefanova, R.2
Ranganathan, A.3
Schutze, G.E.4
Eisenach, K.D.5
Cave, M.D.6
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