메뉴 건너뛰기




Volumn 37, Issue 3, 2009, Pages 175-186

Molecular evolution of the junctophilin gene family

Author keywords

Calcium signaling; Excitable cells; Excitation contraction coupling; Junctional membrane complex; MORN motif

Indexed keywords

CALCIUM;

EID: 66349127484     PISSN: 10948341     EISSN: 15312267     Source Type: Journal    
DOI: 10.1152/physiolgenomics.00017.2009     Document Type: Article
Times cited : (74)

References (54)
  • 1
    • 0029889221 scopus 로고    scopus 로고
    • Local alignment statistics
    • DOI 10.1016/S0076-6879(96)66029-7
    • Altschul SF, Gish W. Local alignment statistics. Methods Enzymol 266: 460-480, 1996. (Pubitemid 26165883)
    • (1996) Methods in Enzymology , vol.266 , pp. 460-480
    • Altschul, S.F.1    Gish, W.2
  • 2
    • 33745256005 scopus 로고    scopus 로고
    • Approximate likelihood-ratio test for branches: A fast, accurate, and powerful alternative
    • DOI 10.1080/10635150600755453, PII T8083888667361
    • Anisimova M, Gascuel O. Approximate likelihood-ratio test for branches: a fast, accurate, and powerful alternative. Syst Biol 55: 539-552, 2006. (Pubitemid 43922340)
    • (2006) Systematic Biology , vol.55 , Issue.4 , pp. 539-552
    • Anisimova, M.1    Gascuel, O.2
  • 3
    • 3242692393 scopus 로고    scopus 로고
    • Macromolecular complexes regulating cardiac ryanodine receptor function
    • DOI 10.1016/j.yjmcc.2004.05.026, PII S0022282804001671
    • Bers DM. Macromolecular complexes regulating cardiac ryanodine receptor function. J Mol Cell Cardiol 37: 417-429, 2004. (Pubitemid 38953370)
    • (2004) Journal of Molecular and Cellular Cardiology , vol.37 , Issue.2 , pp. 417-429
    • Bers, D.M.1
  • 4
    • 2442713832 scopus 로고    scopus 로고
    • GeneWise and Genomewise
    • DOI 10.1101/gr.1865504
    • Birney E, Clamp M, Durbin R. GeneWise and Genomewise. Genome Res 14: 988-995, 2004. (Pubitemid 38660520)
    • (2004) Genome Research , vol.14 , Issue.5 , pp. 988-995
    • Birney, E.1    Clamp, M.2    Durbin, R.3
  • 7
    • 33846510967 scopus 로고    scopus 로고
    • Novel mechanism for sudden infant death syndrome: Persistent late sodium current secondary to mutations in caveolin-3
    • DOI 10.1016/j.hrthm.2006.11.030, PII S1547527106022284
    • Cronk LB, Ye B, Kaku T, Tester DJ, Vatta M, Makielski JC, Ackerman MJ. Novel mechanism for sudden infant death syndrome: persistent late sodium current secondary to mutations in caveolin-3. Heart Rhythm 4: 161-166, 2007. (Pubitemid 46158709)
    • (2007) Heart Rhythm , vol.4 , Issue.2 , pp. 161-166
    • Cronk, L.B.1    Ye, B.2    Kaku, T.3    Tester, D.J.4    Vatta, M.5    Makielski, J.C.6    Ackerman, M.J.7
  • 10
    • 26444603772 scopus 로고    scopus 로고
    • Two rounds of whole genome duplication in the ancestral vertebrate
    • DOI 10.1371/journal.pbio.0030314, e314
    • Dehal P, Boore JL. Two rounds of whole genome duplication in the ancestral vertebrate. PLoS Biol 3: e314, 2005. (Pubitemid 41437140)
    • (2005) PLoS Biology , vol.3 , Issue.10
    • Dehal, P.1    Boore, J.L.2
  • 12
    • 0021084453 scopus 로고
    • Calcium-induced release of calcium from the cardiac sarcoplasmic reticulum
    • Fabiato A. Calcium-induced release of calcium from the cardiac sarcoplasmic reticulum. Am J Physiol Cell Physiol 245: C1-C14, 1983. (Pubitemid 14225289)
    • (1983) American Journal of Physiology - Cell Physiology , vol.14 , Issue.1
    • Fabiato, A.1
  • 13
    • 30744464873 scopus 로고    scopus 로고
    • Insulin-dependent interactions of proteins with GLUT4 revealed through stable isotope labeling by amino acids in cell culture (SILAC)
    • DOI 10.1021/pr0502626
    • Foster LJ, Rudich A, Talior I, Patel N, Huang X, Furtado LM, Bilan PJ, Mann M, Klip A. Insulin-dependent interactions of proteins with GLUT4 revealed through stable isotope labeling by amino acids in cell culture (SILAC). J Proteome Res 5: 64-75, 2006. (Pubitemid 43100798)
    • (2006) Journal of Proteome Research , vol.5 , Issue.1 , pp. 64-75
    • Foster, L.J.1    Rudich, A.2    Talior, I.3    Patel, N.4    Huang, X.5    Furtado, L.M.6    Bilan, P.J.7    Mann, M.8    Klip, A.9
  • 15
    • 7444272876 scopus 로고    scopus 로고
    • Proteomics-based identification of proteins interacting with Smad3: SREBP-2 forms a complex with Smad3 and inhibits its transcriptional activity
    • DOI 10.1016/j.febslet.2004.09.069, PII S0014579304012025
    • Grimsby S, Jaensson H, Dubrovska A, Lomnytska M, Hellman U, Souchelnytskyi S. Proteomics-based identification of proteins interacting with Smad3: SREBP-2 forms a complex with Smad3 and inhibits its transcriptional activity. FEBS Lett 577: 93-100, 2004. (Pubitemid 39452366)
    • (2004) FEBS Letters , vol.577 , Issue.1-2 , pp. 93-100
    • Grimsby, S.1    Jaensson, H.2    Dubrovska, A.3    Lomnytska, M.4    Hellman, U.5    Souchelnytskyi, S.6
  • 17
    • 0242578620 scopus 로고    scopus 로고
    • A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood
    • DOI 10.1080/10635150390235520
    • Guindon S, Gascuel O. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52: 696-704, 2003. (Pubitemid 37365050)
    • (2003) Systematic Biology , vol.52 , Issue.5 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 18
    • 23144433822 scopus 로고    scopus 로고
    • PHYML Online - A web server for fast maximum likelihood-based phylogenetic inference
    • DOI 10.1093/nar/gki352
    • Guindon S, Lethiec F, Duroux P, Gascuel O. PHYML Online - a web server for fast maximum likelihood-based phylogenetic inference. Nucleic Acids Res 33: W557-W559, 2005. (Pubitemid 44529983)
    • (2005) Nucleic Acids Research , vol.33 , Issue.WEB. SERV. ISS
    • Guindon, S.1    Lethiec, F.2    Duroux, P.3    Gascuel, O.4
  • 23
    • 34247144568 scopus 로고    scopus 로고
    • The N-terminal membrane occupation and recognition nexus domain of Arabidopsis phosphatidylinositol phosphate kinase 1 regulates enzyme activity
    • DOI 10.1074/jbc.M611342200
    • Im YJ, Davis AJ, Perera IY, Johannes E, Allen NS, Boss WF. The N-terminal membrane occupation and recognition nexus domain of Arabidopsis phosphatidylinositol phosphate kinase 1 regulates enzyme activity. J Biol Chem 282: 5443-5452, 2007. (Pubitemid 47093745)
    • (2007) Journal of Biological Chemistry , vol.282 , Issue.8 , pp. 5443-5452
    • Yang, J.I.1    Davis, A.J.2    Perera, I.Y.3    Johannes, E.4    Allen, N.S.5    Boss, W.F.6
  • 24
    • 0035802106 scopus 로고    scopus 로고
    • Deficiency of triad junction and contraction in mutant skeletal muscle lacking junctophilin type 1
    • DOI 10.1083/jcb.200105040
    • Ito K, Komazaki S, Sasamoto K, Yoshida M, Nishi M, Kitamura K, Takeshima H. Deficiency of triad junction and contraction in mutant skeletal muscle lacking junctophilin type 1. J Cell Biol 154: 1059-1067, 2001. (Pubitemid 34286184)
    • (2001) Journal of Cell Biology , vol.154 , Issue.5 , pp. 1059-1067
    • Ito, K.1    Komazaki, S.2    Sasamoto, K.3    Yoshida, M.4    Nishi, M.5    Kitamura, K.6    Takeshima, H.7
  • 25
    • 0037205752 scopus 로고    scopus 로고
    • Deficiency of triad formation in developing skeletal muscle cells lacking junctophilin type 1
    • DOI 10.1016/S0014-5793(02)03042-9, PII S0014579302030429
    • Komazaki S, Ito K, Takeshima H, Nakamura H. Deficiency of triad formation in developing skeletal muscle cells lacking junctophilin type 1. FEBS Lett 524: 225-229, 2002. (Pubitemid 34804864)
    • (2002) FEBS Letters , vol.524 , Issue.1-3 , pp. 225-229
    • Komazaki, S.1    Ito, K.2    Takeshima, H.3    Nakamura, H.4
  • 26
    • 1642369985 scopus 로고    scopus 로고
    • Functional analysis of mammalian genes using amphibian embryonic cells
    • DOI 10.1093/jmicro/53.1.87
    • Komazaki S, Nakamura H. Functional analysis of mammalian genes using amphibian embryonic cells. J Electron Microsc (Tokyo) 53: 87-92, 2004. (Pubitemid 38370860)
    • (2004) Journal of Electron Microscopy , vol.53 , Issue.1 , pp. 87-92
    • Komazaki, S.1    Nakamura, H.2
  • 29
    • 45849154166 scopus 로고    scopus 로고
    • An improved general amino acid replacement matrix
    • Le SQ, Gascuel O. An improved general amino acid replacement matrix. Mol Biol Evol 25: 1307-1320, 2008.
    • (2008) Mol Biol Evol , vol.25 , pp. 1307-1320
    • Le, S.Q.1    Gascuel, O.2
  • 30
    • 33745608093 scopus 로고    scopus 로고
    • MORN motifs in plant PIPKs are involved in the regulation of subcellular localization and phospholipid binding
    • DOI 10.1038/sj.cr.7310058, PII 7310058
    • Ma H, Lou Y, Lin WH, Xue HW. MORN motifs in plant PIPKs are involved in the regulation of subcellular localization and phospholipid binding. Cell Res 16: 466-478, 2006. (Pubitemid 43987399)
    • (2006) Cell Research , vol.16 , Issue.5 , pp. 466-478
    • Ma, H.1    Lou, Y.2    Lin, W.H.3    Xue, H.W.4
  • 32
    • 26244444380 scopus 로고    scopus 로고
    • From 2R to 3R: Evidence for a fish-specific genome duplication (FSGD)
    • DOI 10.1002/bies.20293
    • Meyer A, Van de Peer Y. From 2R to 3R: evidence for a fish-specific genome duplication (FSGD). Bioessays 27: 937-945, 2005. (Pubitemid 41415948)
    • (2005) BioEssays , vol.27 , Issue.9 , pp. 937-945
    • Meyer, A.1    Van De Peer, Y.2
  • 37
    • 0141992070 scopus 로고    scopus 로고
    • Coexpression of junctophilin type 3 and type 4 in brain
    • DOI 10.1016/S0169-328X(03)00341-3
    • Nishi M, Sakagami H, Komazaki S, Kondo H, Takeshima H. Coexpression of junctophilin type 3 and type 4 in brain. Brain Res Mol Brain Res 118: 102-110, 2003. (Pubitemid 37238992)
    • (2003) Molecular Brain Research , vol.118 , Issue.1-2 , pp. 102-110
    • Nishi, M.1    Sakagami, H.2    Komazaki, S.3    Kondo, H.4    Takeshima, H.5
  • 38
    • 33750456519 scopus 로고    scopus 로고
    • Global, in Vivo, and Site-Specific Phosphorylation Dynamics in Signaling Networks
    • DOI 10.1016/j.cell.2006.09.026, PII S0092867406012748
    • Olsen JV, Blagoev B, Gnad F, Macek B, Kumar C, Mortensen P, Mann M. Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. Cell 127: 635-648, 2006. (Pubitemid 44647421)
    • (2006) Cell , vol.127 , Issue.3 , pp. 635-648
    • Olsen, J.V.1    Blagoev, B.2    Gnad, F.3    Macek, B.4    Kumar, C.5    Mortensen, P.6    Mann, M.7
  • 40
    • 34247847732 scopus 로고    scopus 로고
    • Conformation-dependent stability of junctophilin 1 (JP1) and Ryanodine Receptor Type 1 (RyR1) channel complex is mediated by their hyper-reactive thiols
    • DOI 10.1074/jbc.M609936200
    • Phimister AJ, Lango J, Lee EH, Ernst-Russell MA, Takeshima H, Ma J, Allen PD, Pessah IN. Conformation-dependent stability of junctophilin 1 (JP1) and ryanodine receptor type 1 (RyR1) channel complex is mediated by their hyper-reactive thiols. J Biol Chem 282: 8667-8677, 2007. (Pubitemid 47093508)
    • (2007) Journal of Biological Chemistry , vol.282 , Issue.12 , pp. 8667-8677
    • Phimister, A.J.1    Lango, J.2    Eun, H.L.3    Ernst-Russell, M.A.4    Takeshima, H.5    Jianjie, M.6    Allen, P.D.7    Pessah, I.N.8
  • 42
    • 0035974791 scopus 로고    scopus 로고
    • Stores not just for storage: Intracellular calcium release and synaptic plasticity
    • DOI 10.1016/S0896-6273(01)00402-0
    • Rose CR, Konnerth A. Stores not just for storage. Intracellular calcium release and synaptic plasticity. Neuron 31: 519-522, 2001. (Pubitemid 32835107)
    • (2001) Neuron , vol.31 , Issue.4 , pp. 519-522
    • Rose, C.R.1    Konnerth, A.2
  • 44
    • 0025008168 scopus 로고
    • Sequence logos: A new way to display consensus sequences
    • Schneider TD, Stephens RM. Sequence logos: a new way to display consensus sequences. Nucleic Acids Res 18: 6097-6100, 1990. (Pubitemid 20364672)
    • (1990) Nucleic Acids Research , vol.18 , Issue.20 , pp. 6097-6100
    • Schneider, T.D.1    Stephens, R.M.2
  • 46
    • 0033636778 scopus 로고    scopus 로고
    • Junctophilins: A novel family of junctional membrane complex proteins
    • Takeshima H, Komazaki S, Nishi M, Iino M, Kangawa K. Junctophilins: a novel family of junctional membrane complex proteins. Mol Cell 6: 11-22, 2000.
    • (2000) Mol Cell , vol.6 , pp. 11-22
    • Takeshima, H.1    Komazaki, S.2    Nishi, M.3    Iino, M.4    Kangawa, K.5
  • 48
    • 0029815650 scopus 로고    scopus 로고
    • The human cardiac muscle ryanodine receptor-calcium release channel: Identification, primary structure and topological analysis
    • Tunwell RE, Wickenden C, Bertrand BM, Shevchenko VI, Walsh MB, Allen PD, Lai FA. The human cardiac muscle ryanodine receptor-calcium release channel: identification, primary structure and topological analysis. Biochem J 318: 477-487, 1996. (Pubitemid 26305947)
    • (1996) Biochemical Journal , vol.318 , Issue.2 , pp. 477-487
    • Tunwell, R.E.A.1    Wickenden, C.2    Bertrand, B.M.A.3    Shevchenko, V.I.4    Walsh, M.B.5    Allen, P.D.6    Lai, F.A.7
  • 50
    • 15544374098 scopus 로고    scopus 로고
    • Intracellular calcium release and cardiac disease
    • DOI 10.1146/annurev.physiol.67.040403.114521
    • Wehrens XH, Lehnart SE, Marks AR. Intracellular calcium release and cardiac disease. Annu Rev Physiol 67: 69-98, 2005. (Pubitemid 40404486)
    • (2005) Annual Review of Physiology , vol.67 , pp. 69-98
    • Wehrens, X.H.T.1    Lehnart, S.E.2    Marks, A.R.3
  • 52
    • 1342267006 scopus 로고    scopus 로고
    • Caveolinlopathies: Mutations in caveolin-3 cause four distinct autosomal dominant muscle diseases
    • Woodman SE, Sotgia F, Galbiati F, Minetti C, Lisanti MP. Caveolinopathies: mutations in caveolin-3 cause four distinct autosomal dominant muscle diseases. Neurology 62: 538-543, 2004. (Pubitemid 38252792)
    • (2004) Neurology , vol.62 , Issue.4 , pp. 538-543
    • Woodman, S.E.1    Sotgia, F.2    Galbiati, F.3    Minetti, C.4    Lisanti, M.P.5
  • 53
    • 33748569838 scopus 로고    scopus 로고
    • 2+ store depletion causes STIM1 to accumulate in ER regions closely associated with the plasma membrane
    • 2+ store depletion causes STIM1 to accumulate in ER regions closely associated with the plasma membrane. J Cell Biol 174: 803-813, 2006.
    • (2006) J Cell Biol , vol.174 , pp. 803-813
    • Wu, M.M.1    Buchanan, J.2    Luik, R.M.3    Lewis, R.S.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.