Proteomics analysis of perilymph and cerebrospinal fluid in mouse

Laryngoscope

Volumn 119, Issue 5, 2009, Pages 953-958

  Leary Swan, Erin E ^a,b   Peppi, Marcello ^c,d   Chen, Zhiqiang ^c,d   Green, Karin M ^e   Evans, James E ^e   McKenna, Michael J ^c   Mescher, Mark J ^a   Kujawa, Sharon G ^c,d   Sewell, William F ^c,d  

^a CHARLES STARK DRAPER LABORATORY   (United States)

^b USA   (United States)

^c HARVARD MEDICAL SCHOOL   (United States)

^d MASSACHUSETTS EYE AND EAR INFIRMARY   (United States)

^e UNIVERSITY OF MASSACHUSETTS MEDICAL SCHOOL   (United States)

Author keywords

Biofouling; Drug delivery; Inner ear; Intracochlear; Protein

Indexed keywords

ALBUMIN; ALPHA 2 MACROGLOBULIN; APOLIPOPROTEIN; CARBONATE DEHYDRATASE; CARBOXYLESTERASE; CYSTATIN; GLOBULIN; HIGH MOLECULAR WEIGHT KININOGEN; LACTATE DEHYDROGENASE; MURINOLGOBULIN; PROSTAGLANDIN D SYNTHASE; PROTEINASE INHIBITOR; SERINE PROTEINASE INHIBITOR; UNCLASSIFIED DRUG;

ANIMAL EXPERIMENT; ANIMAL TISSUE; ARTICLE; CAPILLARY CHROMATOGRAPHY; CEREBROSPINAL FLUID; CONTROLLED STUDY; LIQUID CHROMATOGRAPHY; MALE; MASS SPECTROMETRY; MOUSE; NONHUMAN; PERILYMPH; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN FUNCTION; PROTEIN INTERACTION; PROTEOMICS; ANIMAL; CHEMISTRY;

ANIMALS; CEREBROSPINAL FLUID; CHROMATOGRAPHY, LIQUID; MALE; MASS SPECTROMETRY; MICE; PERILYMPH; PROTEOMICS;

EID: 66349119294     PISSN: 0023852X     EISSN: None     Source Type: Journal    
DOI: 10.1002/lary.20209     Document Type: Article

References (23)

1. Swan EEL, Mescher MJ, Sewell WF, Tao SL, Borenstein JT. Inner ear drug delivery for auditory applications. Adv Drug Del Rev 2008; 60:1583-1599.
2. Babensee JE, Anderson JM, McIntire LV, Mikos AG. Host response to tissue engineered devices. Adv Drug Del Rev 1998; 33:111-139.
3. Castner DG, Ratner BD. Biomedical surface science: foundations to frontiers. Surf Sci 2002; 500:28-60.
4. Thalmann I., Comegys T., Liu S., Ito Z., Thalmann R. Protein profiles of perilymph and endolymph of the guinea pig. Hear Res 1992; 63:37-42.
5. Thalmann I., Kohut R., Ryu J., Comegys T., Senarita M., Thalmann R. Protein profile of human perilymph: in search of markers for the diagnosis of perilymph fistula and other inner ear disease. Otolaryngol Head Neck Surg 1994; 111: 273-280.
6. Paugh DR, Telian SA, Disher MJ. Identification of perilymph proteins by two-dimensional gel electrophoresis. Otolaryngol Head Neck Surg 1991; 104:517-525.
7. Arrer E., Oberascher G., Gibitz H. A. map of cochlear perilymph protein based on high-resolution two-dimensional electrophoresis. Eur Arch Otorhinolaryngol 1990; 247: 271-273.
8. Salt AN, Hale SA, Plontke SK. Perilymph sampling from the cochlear apex: a reliable method to obtain higher purity perilymph samples from the scala tympani. J Neurosci Meth 2006; 153:121-129.
9. Vogelweid CM, Kier AB. A technique for the collection of cerebrospinal fluid from mice. Lab Animal Sci 1988; 38: 91-92.
10. Ross P., Huang Y., Marchese J., et al. Multiplexed protein quantitation in Saccharomyces cerevisiae using aminereactive isobaric tagging reagents. Mol Cell Proteomics 2004; 3:1154-1169.
11. Elias J., Gygi S. Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry. Nat Methods 2007; 4:207-214.
12. Ishihama Y., Oda Y., Tabata T., et al. Exponentially modified protein abundance index (emPAI) for estimation of absolute protein amount in proteomics by the number of sequenced peptides per protein. Mol Cell Proteomics 2005; 4:1265-1272.
13. Browne C., Bennett H., Solomon S. The isolation of peptides by high-performance liquid chromatography using predicted elution positions. Anal Biochem 1982; 124:201-208.
14. Urade Y., Hayaishi O. Biochemical, structural, genetic, physiological, and pathophysiological features of lipocalin-type prostaglandin D synthase. Biochim Biophys Acta 2000; 1482:259-271.
15. Goldstein A., Aronow L., Kalman S. Principles of Drug Action: The Basis of Pharmacology. New York: John Wiley and Sons; 1974.
16. Bhattacharya SK. Focus on molecules: cochlin. Exp Eye Res 2006; 82:355-356.
17. Lai K., Kolippakkam D., Berretta L. Comprehensive and quantitative proteome profiling of the mouse liver and plasma. Hepatology 2008; 47:1043-1051.
18. Zhang S., Wright G., Yang Y Materials and techniques for electrochemical biosensor design and construction. Biosens Bioelectron 2000; 15:273-282.
19. Sasaki DY, Cox JD, Follstaedt SC, Curry MS, Skirboll SK, Gourley PL. Glial cell adhesion and protein adsorption on SAM coated semiconductor and glass surfaces of a microfluidic structure. Proc SPIE 2001; 4265:152-163.
20. Richardson RRJ, Miller JA, Reichert WM. Polyimides as biomaterials: preliminary biocompatibility testing. Biomaterials 1993; 14:627-635.
21. Lim C., Slack S., Ufer S., Lindner E. Protein adsorption to planar electrochemical sensors and sensor materials. Pure Appl Chem 2004; 76:753-764.
22. Scharfstein J., Schmitz V., Svensjo E., Granato A., Monteiro A. Kininogens coordinate adaptive immunity through the proteolytic release of bradykinin, an endogenous danger signal driving dendritic cell maturation. Scand J Immunol 2007; 66:128-136.
23. Yung L., Lim F., Khan M., et al. High-molecular-weight kininogen preadsorbed to glass surface markedly reduces neutrophil adhesion. Biomaterials 2000; 21:405-414.