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Volumn 57, Issue 2, 2009, Pages 131-141

On the utility of DNA barcoding for species differentiation among brown macroalgae (Phaeophyceae) including a novel extraction protocol

Author keywords

Barcode; Cytochrome c oxidase 1; DNA extraction; Fucales; Kelp; Laminariales; Phaeophyceae; Tilopteridales

Indexed keywords

CELL ORGANELLE; CONCENTRATION (COMPOSITION); DNA FINGERPRINTING; GENETIC DIFFERENTIATION; IDENTIFICATION METHOD; MACROALGA; PHENOLIC COMPOUND; POLYMERASE CHAIN REACTION; TAXONOMY;

EID: 66149156972     PISSN: 13220829     EISSN: 14401835     Source Type: Journal    
DOI: 10.1111/j.1440-1835.2009.00530.x     Document Type: Article
Times cited : (88)

References (24)
  • 2
    • 85046992036 scopus 로고
    • A field-compatible method for extraction of fingerprint-quality DNA from Macrocystis pyrifera (Phaeophyceae)
    • Coyer, J. A., Steller, D. L. Alberte, R. S. 1995. A field-compatible method for extraction of fingerprint-quality DNA from Macrocystis pyrifera (Phaeophyceae). J. Phycol. 30 : 545 52.
    • (1995) J. Phycol. , vol.30 , pp. 545-552
    • Coyer, J.A.1    Steller, D.L.2    Alberte, R.S.3
  • 3
    • 0037007637 scopus 로고    scopus 로고
    • Challenges for taxonomy
    • Godfray, H. C. 2002. Challenges for taxonomy. Nature 417 : 17 19.
    • (2002) Nature , vol.417 , pp. 17-19
    • Godfray, H.C.1
  • 5
    • 0042531561 scopus 로고    scopus 로고
    • Barcoding animal life: Cytochrome c oxidase subunit 1 divergences among closely related species
    • Hebert, P. D. N., Ratnasingham, S. deWaard, J. R. 2003b. Barcoding animal life: Cytochrome c oxidase subunit 1 divergences among closely related species. Proc. R. Soc. B. 270 : S96 9.
    • (2003) Proc. R. Soc. B. , vol.270 , pp. 96-99
    • Hebert, P.D.N.1    Ratnasingham, S.2    Dewaard, J.R.3
  • 6
    • 6944255373 scopus 로고    scopus 로고
    • Ten species in one: DNA barcoding reveals cryptic species in the neotropical skipper butterfly Astraptes fulgerator
    • Herbert, P. D. N., Penton, E. H., Burns, J. M., Janzen, D. H. Hallwachs, W. 2004a. Ten species in one: DNA barcoding reveals cryptic species in the neotropical skipper butterfly Astraptes fulgerator. Proc. Natl Acad. Sci. USA 101 : 14812 17.
    • (2004) Proc. Natl Acad. Sci. USA , vol.101 , pp. 14812-14817
    • Herbert, P.D.N.1    Penton, E.H.2    Burns, J.M.3    Janzen, D.H.4    Hallwachs, W.5
  • 8
    • 33847342073 scopus 로고    scopus 로고
    • A fast and inexpensive DNA extraction/purification protocol for brown macroalgae
    • Hoarau, G., Coyer, J. A., Stam, W. T. Olsen, J. L. 2007. A fast and inexpensive DNA extraction/purification protocol for brown macroalgae. Mol. Ecol. Notes 7 : 191 3.
    • (2007) Mol. Ecol. Notes , vol.7 , pp. 191-193
    • Hoarau, G.1    Coyer, J.A.2    Stam, W.T.3    Olsen, J.L.4
  • 9
    • 33751313616 scopus 로고    scopus 로고
    • An inexpensive, automation-friendly protocol for recovering high-quality DNA
    • Ivanova, N. V., DeWaard, J. R. Hebert, P. D. N. 2006. An inexpensive, automation-friendly protocol for recovering high-quality DNA. Mol. Ecol. Notes 6 : 998 1002.
    • (2006) Mol. Ecol. Notes , vol.6 , pp. 998-1002
    • Ivanova, N.V.1    Dewaard, J.R.2    Hebert, P.D.N.3
  • 10
    • 65349085716 scopus 로고    scopus 로고
    • Assigning morphological variants of Fucus (Fucales, Phaeophyceae) in Canadian waters to recognized species using DNA barcoding
    • Kucera, H. K. Saunders, G. W. 2008. Assigning morphological variants of Fucus (Fucales, Phaeophyceae) in Canadian waters to recognized species using DNA barcoding. Botany 86 : 1065 79.
    • (2008) Botany , vol.86 , pp. 1065-1079
    • Kucera, H.K.1    Saunders, G.W.2
  • 11
    • 33645552819 scopus 로고    scopus 로고
    • A multi-gene molecular investigation of the kelp (Laminariales, Phaeophyceae) supports substantial taxonomic re-organization
    • Lane, C. E., Mayes, C., Druehl, L. Saunders, G. W. 2006. A multi-gene molecular investigation of the kelp (Laminariales, Phaeophyceae) supports substantial taxonomic re-organization. J. Phycol. 42 : 493 512.
    • (2006) J. Phycol. , vol.42 , pp. 493-512
    • Lane, C.E.1    Mayes, C.2    Druehl, L.3    Saunders, G.W.4
  • 12
    • 34447272660 scopus 로고    scopus 로고
    • A molecular assessment of northeast Pacific Alaria species (Laminariales, Paeophyceae) with reference to the utility of DNA barcoding
    • Lane, C. E., Lindstrom, S. C. Saunders, G. W. 2007. A molecular assessment of northeast Pacific Alaria species (Laminariales, Paeophyceae) with reference to the utility of DNA barcoding. Mol. Phylogenet. Evol. 44 : 634 48.
    • (2007) Mol. Phylogenet. Evol. , vol.44 , pp. 634-648
    • Lane, C.E.1    Lindstrom, S.C.2    Saunders, G.W.3
  • 14
    • 84989658208 scopus 로고
    • DNA extraction methods for kelp (Laminariales) tissue
    • Mayes, C., Saunders, G. W., Tan, I. H. Druehl, L. D. 1992. DNA extraction methods for kelp (Laminariales) tissue. J. Phycol. 28 : 712 16.
    • (1992) J. Phycol. , vol.28 , pp. 712-716
    • Mayes, C.1    Saunders, G.W.2    Tan, I.H.3    Druehl, L.D.4
  • 15
    • 33748894695 scopus 로고    scopus 로고
    • DNA barcoding in land plants: Evaluation of rbcL in a multigene tiered approach
    • Newmaster, S. G., Fazekas, A. J. Ragupathy, S. 2006. DNA barcoding in land plants: evaluation of rbcL in a multigene tiered approach. Can. J. Bot. 84 : 335 41.
    • (2006) Can. J. Bot. , vol.84 , pp. 335-341
    • Newmaster, S.G.1    Fazekas, A.J.2    Ragupathy, S.3
  • 16
    • 0034937047 scopus 로고    scopus 로고
    • An effective DNA extraction protocol for brown algae
    • Phillips, N., Smith, C. M. Morden, C. W. 2001. An effective DNA extraction protocol for brown algae. Phycol. Res. 49 : 97 102.
    • (2001) Phycol. Res. , vol.49 , pp. 97-102
    • Phillips, N.1    Smith, C.M.2    Morden, C.W.3
  • 17
    • 33748371658 scopus 로고    scopus 로고
    • Assessing the use of the mitochondrial COI marker for use in DNA barcoding of red algae (Rhodophyta)
    • Robba, L., Russell, S. J., Barker, G. L. Brodie, J. 2006. Assessing the use of the mitochondrial COI marker for use in DNA barcoding of red algae (Rhodophyta). Am. J. Bot. 93 : 1101 8.
    • (2006) Am. J. Bot. , vol.93 , pp. 1101-1108
    • Robba, L.1    Russell, S.J.2    Barker, G.L.3    Brodie, J.4
  • 18
    • 84989634749 scopus 로고
    • Gel purification of red algal genomic DNA - An inexpensive and rapid method for the isolation of polymerase chain reaction-friendly DNA
    • Saunders, G. W. 1993. Gel purification of red algal genomic DNA - an inexpensive and rapid method for the isolation of polymerase chain reaction-friendly DNA. J. Phycol. 29 : 251 4.
    • (1993) J. Phycol. , vol.29 , pp. 251-254
    • Saunders, G.W.1
  • 19
    • 33645782783 scopus 로고    scopus 로고
    • Applying DNA barcoding to red macroalgae: A preliminary appraisal holds promise for future applications
    • Saunders, G. W. 2005. Applying DNA barcoding to red macroalgae: a preliminary appraisal holds promise for future applications. Proc. R. Soc. B. 360 : 1879 88.
    • (2005) Proc. R. Soc. B. , vol.360 , pp. 1879-1888
    • Saunders, G.W.1
  • 20
    • 0028868255 scopus 로고
    • The phylogenetic affinities of Notheia anomala (Fucales, Phaeophyceae) as determined for partial small-subunit ribosomal-RNA gene-sequences
    • Saunders, G. W. Kraft, G. T. 1995. The phylogenetic affinities of Notheia anomala (Fucales, Phaeophyceae) as determined for partial small-subunit ribosomal-RNA gene-sequences. Phycologia 34 : 383 9.
    • (1995) Phycologia , vol.34 , pp. 383-389
    • Saunders, G.W.1    Kraft, G.T.2
  • 21
    • 0004248459 scopus 로고    scopus 로고
    • Sinauer Associates. Sunderland, MA.
    • Swofford, D. L. 2002. PAUP*. Sinauer Associates, Sunderland, MA.
    • (2002) PAUP*.
    • Swofford, D.L.1
  • 22
    • 0035092505 scopus 로고    scopus 로고
    • Phylogeny of the Dumontiaceae (Gigartinales, Rhodophyta) and associated families based on SSU rDNA and internal transcribed spacer sequence data
    • Tai, V., Lindstrom, S. Saunders, G. W. 2001. Phylogeny of the Dumontiaceae (Gigartinales, Rhodophyta) and associated families based on SSU rDNA and internal transcribed spacer sequence data. J. Phycol. 37 : 184 96.
    • (2001) J. Phycol. , vol.37 , pp. 184-196
    • Tai, V.1    Lindstrom, S.2    Saunders, G.W.3
  • 23
    • 33646467989 scopus 로고    scopus 로고
    • The future of tropical forest species
    • Wright, S. J. Muller-Landau, H. C. 2006. The future of tropical forest species. Biotropica 38 (3 287 301.
    • (2006) Biotropica , vol.38 , Issue.3 , pp. 287-301
    • Wright, S.J.1    Muller-Landau, H.C.2
  • 24
    • 0011901808 scopus 로고    scopus 로고
    • Random amplified polymorphic DNA markers for three Japanese laminarian species
    • Yotsukura, N., Kawai, T., Motomura, T. Ichimura, T. 2001. Random amplified polymorphic DNA markers for three Japanese laminarian species. Fish. Sci. 67 : 857 62.
    • (2001) Fish. Sci. , vol.67 , pp. 857-862
    • Yotsukura, N.1    Kawai, T.2    Motomura, T.3    Ichimura, T.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.