-
2
-
-
0015528241
-
Quantitative analysis of bacterial migration in chemotaxis
-
Dahlquist, F. W., P. Lovely, and D. E. Koshland. 1972. Quantitative analysis of bacterial migration in chemotaxis. Nat. New Biol. 236:120-123.
-
(1972)
Nat. New Biol
, vol.236
, pp. 120-123
-
-
Dahlquist, F.W.1
Lovely, P.2
Koshland, D.E.3
-
3
-
-
0015845216
-
Range of attractant concentrations for bacterial chemotaxis and threshold and size of response over this range - Weber Law and related phenomena
-
Mesibov, R., G. W. Ordal, and J. Adler. 1973. Range of attractant concentrations for bacterial chemotaxis and threshold and size of response over this range - Weber Law and related phenomena. J. Gen. Physiol. 62:203-223.
-
(1973)
J. Gen. Physiol
, vol.62
, pp. 203-223
-
-
Mesibov, R.1
Ordal, G.W.2
Adler, J.3
-
4
-
-
0000432710
-
Temporal stimulation of chemotaxis in Escherichia coli
-
Brown, D. A., and H. C. Berg. 1974. Temporal stimulation of chemotaxis in Escherichia coli. Proc. Natl. Acad. Sci. USA. 71:1388-1393.
-
(1974)
Proc. Natl. Acad. Sci. USA
, vol.71
, pp. 1388-1393
-
-
Brown, D.A.1
Berg, H.C.2
-
5
-
-
0033613145
-
Response tuning in bacterial chemotaxis
-
Jasuja, R., L. Yu, D. R. Trentham, and S. Khan. 1999. Response tuning in bacterial chemotaxis. Proc. Natl. Acad. Sci. USA. 96:11346-11351.
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 11346-11351
-
-
Jasuja, R.1
Yu, L.2
Trentham, D.R.3
Khan, S.4
-
6
-
-
55149108941
-
Experimental verification of the behavioral foundation of bacterial transport parameters using microfluidics
-
Ahmed, T., and R. Stocker. 2008. Experimental verification of the behavioral foundation of bacterial transport parameters using microfluidics. Biophys. J. BioFAST. 10.1529/biophysj.108.134510.
-
(2008)
Biophys. J. BioFAST. 10.1529/biophysj.108.134510
-
-
Ahmed, T.1
Stocker, R.2
-
7
-
-
0037965621
-
A sensitive, versatile microfluidic assay for bacterial chemotaxis
-
Mao, H. B., P. S. Cremer, and M. D. Manson. 2003. A sensitive, versatile microfluidic assay for bacterial chemotaxis. Proc. Natl. Acad. Sci. USA. 100:5449-5454.
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 5449-5454
-
-
Mao, H.B.1
Cremer, P.S.2
Manson, M.D.3
-
8
-
-
48449104873
-
Overview of Mathematical Approaches Used to Model Bacterial Chemotaxis I: The Single Cell
-
Tindall, M., S. Porter, P. Maini, G. Gaglia, and J. Armitage. 2008. Overview of Mathematical Approaches Used to Model Bacterial Chemotaxis I: The Single Cell. Bull. Math. Biol. 70:1525-1569.
-
(2008)
Bull. Math. Biol
, vol.70
, pp. 1525-1569
-
-
Tindall, M.1
Porter, S.2
Maini, P.3
Gaglia, G.4
Armitage, J.5
-
9
-
-
48449102329
-
Overview of Mathematical Approaches Used to Model Bacterial Chemotaxis II: Bacterial Populations
-
Tindall, M., P. Maini, S. Porter, and J. Armitage. 2008. Overview of Mathematical Approaches Used to Model Bacterial Chemotaxis II: Bacterial Populations. Bull. Math. Biol. 70:1570-1607.
-
(2008)
Bull. Math. Biol
, vol.70
, pp. 1570-1607
-
-
Tindall, M.1
Maini, P.2
Porter, S.3
Armitage, J.4
-
10
-
-
0035312774
-
Transmembrane signaling in bacterial chemoreceptors
-
Falke, J. J., and G. L. Hazelbauer. 2001. Transmembrane signaling in bacterial chemoreceptors. Trends Biochem. Sci. 26:257-265.
-
(2001)
Trends Biochem. Sci
, vol.26
, pp. 257-265
-
-
Falke, J.J.1
Hazelbauer, G.L.2
-
11
-
-
0033865904
-
Localization of components of the chemotaxis machinery of Escherichia coli using fluorescent protein fusions
-
Sourjik, V., and H. C. Berg. 2000. Localization of components of the chemotaxis machinery of Escherichia coli using fluorescent protein fusions. Mol. Microbiol. 37:740-751.
-
(2000)
Mol. Microbiol
, vol.37
, pp. 740-751
-
-
Sourjik, V.1
Berg, H.C.2
-
13
-
-
0035866594
-
Generation of gradients having complex shapes using microfluidic networks
-
Dertinger, S. K. W., D. T. Chiu, N. L. Jeon, and G. M. Whitesides. 2001. Generation of gradients having complex shapes using microfluidic networks. Anal. Chem. 73:1240-1246.
-
(2001)
Anal. Chem
, vol.73
, pp. 1240-1246
-
-
Dertinger, S.K.W.1
Chiu, D.T.2
Jeon, N.L.3
Whitesides, G.M.4
-
14
-
-
17744392648
-
Three-dimensional fluorescent particle tracking at micron-scale using a single camera
-
Wu, M., J. W. Roberts, and M. Buckley. 2005. Three-dimensional fluorescent particle tracking at micron-scale using a single camera. Exp. Fluids. 38:461-465.
-
(2005)
Exp. Fluids
, vol.38
, pp. 461-465
-
-
Wu, M.1
Roberts, J.W.2
Buckley, M.3
-
15
-
-
33746072604
-
Collective bacterial dynamics revealed using a three-dimensional population-scale defocused particle tracking technique
-
Wu, M., J. W. Roberts, S. Kim, D. L. Koch, and M. P. DeLisa. 2006. Collective bacterial dynamics revealed using a three-dimensional population-scale defocused particle tracking technique. Appl. Environ. Microbiol. 72:4987-4994.
-
(2006)
Appl. Environ. Microbiol
, vol.72
, pp. 4987-4994
-
-
Wu, M.1
Roberts, J.W.2
Kim, S.3
Koch, D.L.4
DeLisa, M.P.5
-
17
-
-
34249810035
-
A hydrogel-based microfluidic device for the studies of directed cell migration
-
Cheng, S. -Y., S. Heilman, M. Wasserman, S. Archer, M. L. Shuler, et al. 2007. A hydrogel-based microfluidic device for the studies of directed cell migration. Lab Chip. 7:763-769.
-
(2007)
Lab Chip
, vol.7
, pp. 763-769
-
-
Cheng, S.-Y.1
Heilman, S.2
Wasserman, M.3
Archer, S.4
Shuler, M.L.5
-
18
-
-
0000130214
-
Motile behavior of bacteria
-
Berg, H. C. 2000. Motile behavior of bacteria. Phys. Today. 53:24-29.
-
(2000)
Phys. Today
, vol.53
, pp. 24-29
-
-
Berg, H.C.1
-
19
-
-
0034460297
-
How signals are heard during bacterial chemotaxis: Protein-protein interactions in sensory signal propagation
-
Bren, A., and M. Eisenbach. 2000. How signals are heard during bacterial chemotaxis: Protein-protein interactions in sensory signal propagation. J. Bacteriol. 182:6865-6873.
-
(2000)
J. Bacteriol
, vol.182
, pp. 6865-6873
-
-
Bren, A.1
Eisenbach, M.2
-
20
-
-
0037039384
-
Receptor sensitivity in bacterial chemotaxis
-
Sourjik, V., and H. C. Berg. 2002. Receptor sensitivity in bacterial chemotaxis. Proc. Natl. Acad. Sci. USA. 99:123-127.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 123-127
-
-
Sourjik, V.1
Berg, H.C.2
-
21
-
-
10344256764
-
Single-cell FRET imaging of phosphatase activity in the Escherichia coli chemotaxis system
-
Vaknin, A., and H. C. Berg. 2004. Single-cell FRET imaging of phosphatase activity in the Escherichia coli chemotaxis system. Proc. Natl. Acad. Sci. USA. 101:17072-17077.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 17072-17077
-
-
Vaknin, A.1
Berg, H.C.2
-
22
-
-
1842473065
-
Functional interactions between receptors in bacterial chemotaxis
-
Sourjik, V., and H. C. Berg. 2004. Functional interactions between receptors in bacterial chemotaxis. Nature. 428:437-441.
-
(2004)
Nature
, vol.428
, pp. 437-441
-
-
Sourjik, V.1
Berg, H.C.2
-
23
-
-
0027476771
-
Polar location of the chemoreceptor complex in the Escherichia coli cell
-
Maddock, J. R., and L. Shapiro. 1993. Polar location of the chemoreceptor complex in the Escherichia coli cell. Science. 259:1717-1723.
-
(1993)
Science
, vol.259
, pp. 1717-1723
-
-
Maddock, J.R.1
Shapiro, L.2
-
24
-
-
0032492852
-
Receptor clustering as a cellular mechanism to control sensitivity
-
Bray, D., M. D. Levin, and C. J. Morton-Firth. 1998. Receptor clustering as a cellular mechanism to control sensitivity. Nature. 393:85-88.
-
(1998)
Nature
, vol.393
, pp. 85-88
-
-
Bray, D.1
Levin, M.D.2
Morton-Firth, C.J.3
-
25
-
-
0033621154
-
Heightened sensitivity of a lattice of membrane receptors
-
Duke, T. A. J., and D. Bray. 1999. Heightened sensitivity of a lattice of membrane receptors. Proc. Natl. Acad. Sci. USA. 96:10104-10108.
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 10104-10108
-
-
Duke, T.A.J.1
Bray, D.2
-
26
-
-
0037816259
-
Quantitative modeling of sensitivity in bacterial chemotaxis: The role of coupling among different chemoreceptor species
-
Mello, B. A., and Y. H. Tu. 2003. Quantitative modeling of sensitivity in bacterial chemotaxis: The role of coupling among different chemoreceptor species. Proc. Natl. Acad. Sci. USA. 100:8223-8228.
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 8223-8228
-
-
Mello, B.A.1
Tu, Y.H.2
-
27
-
-
28444449791
-
An allosteric model for heterogeneous receptor complexes: Understanding bacterial chemotaxis responses to multiple stimuli
-
Mello, B. A., and Y. H. Tu. 2005. An allosteric model for heterogeneous receptor complexes: Understanding bacterial chemotaxis responses to multiple stimuli. Proc. Natl. Acad. Sci. USA. 102:17354-17359.
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 17354-17359
-
-
Mello, B.A.1
Tu, Y.H.2
-
28
-
-
32444433329
-
Chemosensing in Escherichia coli: Two regimes of two-state receptors
-
Keymer, J. E., R. G. Endres, M. Skoge, Y. Meir, and N. S. Wingreen. 2006. Chemosensing in Escherichia coli: Two regimes of two-state receptors. Proc. Natl. Acad. Sci. USA. 103:1786-1791.
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 1786-1791
-
-
Keymer, J.E.1
Endres, R.G.2
Skoge, M.3
Meir, Y.4
Wingreen, N.S.5
-
29
-
-
0038637779
-
Perfect and near-perfect adaptation in a model of bacterial chemotaxis
-
Mello, B. A., and Y. Tu. 2003. Perfect and near-perfect adaptation in a model of bacterial chemotaxis. Biophys. J. 84:2943-2956.
-
(2003)
Biophys. J
, vol.84
, pp. 2943-2956
-
-
Mello, B.A.1
Tu, Y.2
-
30
-
-
0030797355
-
Robustness in simple biochemical networks
-
Barkai, N., and S. Leibler. 1997. Robustness in simple biochemical networks. Nature. 387:913-917.
-
(1997)
Nature
, vol.387
, pp. 913-917
-
-
Barkai, N.1
Leibler, S.2
-
31
-
-
0034712843
-
Robust perfect adaptation in bacterial chemotaxis through integral feedback control
-
Yi, T. M., Y. Huang, M. I. Simon, and J. Doyle. 2000. Robust perfect adaptation in bacterial chemotaxis through integral feedback control. Proc. Natl. Acad. Sci. USA. 97:4649-4653.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 4649-4653
-
-
Yi, T.M.1
Huang, Y.2
Simon, M.I.3
Doyle, J.4
-
32
-
-
33644661720
-
A three-channel microfluidic device for generating static linear gradients and its application to the quantitative analysis of bacterial chemotaxis
-
Diao, J. P., L. Young, S. Kim, E. A. Fogarty, S. M. Heilman, et al. 2006. A three-channel microfluidic device for generating static linear gradients and its application to the quantitative analysis of bacterial chemotaxis. Lab Chip. 6:381-388.
-
(2006)
Lab Chip
, vol.6
, pp. 381-388
-
-
Diao, J.P.1
Young, L.2
Kim, S.3
Fogarty, E.A.4
Heilman, S.M.5
-
33
-
-
34447317531
-
Pair velocity correlations among swimming Escherichia coli bacteria are determined by force-quadrupole hydrodynamic interactions
-
Liao, Q., G. Subramanian, M. P. DeLisa, D. L. Koch, and M. Wu. 2007. Pair velocity correlations among swimming Escherichia coli bacteria are determined by force-quadrupole hydrodynamic interactions. Phys. Fluids. 19:061701-061705.
-
(2007)
Phys. Fluids
, vol.19
, pp. 061701-061705
-
-
Liao, Q.1
Subramanian, G.2
DeLisa, M.P.3
Koch, D.L.4
Wu, M.5
-
34
-
-
34047215637
-
Effects of adaptation in maintaining high sensitivity over a wide range of backgrounds for Escherichia coli chemotaxis
-
Mello, B. A., and Y. H. Tu. 2007. Effects of adaptation in maintaining high sensitivity over a wide range of backgrounds for Escherichia coli chemotaxis. Biophys. J. 92:2329-2337.
-
(2007)
Biophys. J
, vol.92
, pp. 2329-2337
-
-
Mello, B.A.1
Tu, Y.H.2
-
35
-
-
33846807515
-
Physical responses of bacterial chemoreceptors
-
Vaknin, A., and H. C. Berg. 2007. Physical responses of bacterial chemoreceptors. J. Mol. Biol. 366:1416-1423.
-
(2007)
J. Mol. Biol
, vol.366
, pp. 1416-1423
-
-
Vaknin, A.1
Berg, H.C.2
-
36
-
-
33144456516
-
Monitoring bacterial chemotaxis by using bioluminescence resonance energy transfer: Absence of feedback from the flagellar motors
-
Shimizu, T. S., N. Delalez, K. Pichler, and H. C. Berg. 2006. Monitoring bacterial chemotaxis by using bioluminescence resonance energy transfer: Absence of feedback from the flagellar motors. Proc. Natl. Acad. Sci. USA. 103:2093-2097.
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 2093-2097
-
-
Shimizu, T.S.1
Delalez, N.2
Pichler, K.3
Berg, H.C.4
-
37
-
-
42149109049
-
Relationship between cellular response and behavioral variability in bacterial chemotaxis
-
Emonet, T., and P. Cluzel. 2008. Relationship between cellular response and behavioral variability in bacterial chemotaxis. Proc. Natl. Acad. Sci. USA. 105:3304-3309.
-
(2008)
Proc. Natl. Acad. Sci. USA
, vol.105
, pp. 3304-3309
-
-
Emonet, T.1
Cluzel, P.2
-
39
-
-
54449097071
-
Modeling the chemotactic response of Escherichia coli to time-varying stimuli
-
Tu, Y., T. S. Shimizu, and H. C. Berg. 2008. Modeling the chemotactic response of Escherichia coli to time-varying stimuli. Proc. Natl. Acad. Sci. USA. 105:14855-14860.
-
(2008)
Proc. Natl. Acad. Sci. USA
, vol.105
, pp. 14855-14860
-
-
Tu, Y.1
Shimizu, T.S.2
Berg, H.C.3
-
40
-
-
0034009901
-
An ultrasensitive bacterial motor revealed by monitoring signaling proteins in single cells
-
Cluzel, P., M. Surette, and S. Leibler. 2000. An ultrasensitive bacterial motor revealed by monitoring signaling proteins in single cells. Science. 287:1652-1655.
-
(2000)
Science
, vol.287
, pp. 1652-1655
-
-
Cluzel, P.1
Surette, M.2
Leibler, S.3
-
41
-
-
28544450485
-
Design principles of a bacterial signalling network
-
Kollmann, M., L. Lovdok, K. Bartholome, J. Timmer, and V. Sourjik. 2005. Design principles of a bacterial signalling network. Nature. 438:504-507.
-
(2005)
Nature
, vol.438
, pp. 504-507
-
-
Kollmann, M.1
Lovdok, L.2
Bartholome, K.3
Timmer, J.4
Sourjik, V.5
-
42
-
-
20744434856
-
AgentCell: A digital single-cell assay for bacterial chemotaxis
-
Emonet, T., C. M. Macal, M. J. North, C. E. Wickersham, and P. Cluzel. 2005. AgentCell: a digital single-cell assay for bacterial chemotaxis. Bioinformatics. 21:2714-2721.
-
(2005)
Bioinformatics
, vol.21
, pp. 2714-2721
-
-
Emonet, T.1
Macal, C.M.2
North, M.J.3
Wickersham, C.E.4
Cluzel, P.5
-
43
-
-
0034961694
-
STOCHSIM: Modelling of stochastic biomolecular processes
-
Le Novere, N., and T. S. Shimizu. 2001. STOCHSIM: modelling of stochastic biomolecular processes. Bioinformatics. 17:575-576.
-
(2001)
Bioinformatics
, vol.17
, pp. 575-576
-
-
Le Novere, N.1
Shimizu, T.S.2
-
46
-
-
0015526205
-
Chemotaxis in Escherichia Coli Analyzed by 3-Dimensional Tracking
-
Berg, H. C., and D. A. Brown. 1972. Chemotaxis in Escherichia Coli Analyzed by 3-Dimensional Tracking. Nature. 239:500-504.
-
(1972)
Nature
, vol.239
, pp. 500-504
-
-
Berg, H.C.1
Brown, D.A.2
-
47
-
-
0347285400
-
Expression of a naturally occurring constitutively active variant of the epidermal growth factor receptor in mouse fibroblasts increases motility
-
Pedersen, M. W., V. Tkach, N. Pedersen, V. Berezin, and H. S. Poulsen. 2004. Expression of a naturally occurring constitutively active variant of the epidermal growth factor receptor in mouse fibroblasts increases motility. Int. J. Cancer. 108:643-653.
-
(2004)
Int. J. Cancer
, vol.108
, pp. 643-653
-
-
Pedersen, M.W.1
Tkach, V.2
Pedersen, N.3
Berezin, V.4
Poulsen, H.S.5
|