Variation in the gene encoding acetolactate-synthase in Lolium species and proactive detection of mutant, herbicide-resistant alleles

Weed Research

Volumn 49, Issue 3, 2009, Pages 326-336

  Delye C ^a   Boucansaud, K ^a   Pernin, F ^a   Le Corre, V ^a  

^a CEMAGREF   (France)

Author keywords

Acetolactate synthase; Derived cleaved amplified polymorphic sequence; Diagnosis; Genetics; Herbicide; Nucleotide variation; Resistance; Ryegrass

Indexed keywords

ALLELE; BIOASSAY; ENZYME ACTIVITY; FORAGE; GENE EXPRESSION; GENETIC VARIATION; GRASS; HERBICIDE; INHIBITOR; MOLECULAR ANALYSIS; MUTATION; PESTICIDE RESISTANCE; POLYMORPHISM; SELECTION; WEED;

FESTUCA; LOLIUM; VULPIA;

EID: 65849440909     PISSN: 00431737     EISSN: 13653180     Source Type: Journal    
DOI: 10.1111/j.1365-3180.2009.00700.x     Document Type: Article

References (32)

1. Broster JC Pratley JE (2006) A decade of monitoring herbicide resistance in Lolium rigidum in Australia. Australian Journal of Experimental Agriculture 46, 1151 1160. (Pubitemid 44195791)
2. Bulinska-Radomska Z Lester RN (1988) Intergeneric relationships of Lolium, Festuca and Vulpia (Poaceae) and their phylogeny. Plant Systematics and Evolution 159, 217 227.
3. Burnet MWM, Hart Q, Holtum JAM Powles SB (1994) Resistance to nine herbicide classes in a population of rigid ryegrass (Lolium rigidum). Weed Science 42, 369 377. (Pubitemid 2138708)
4. Charlesworth B, Morgan MT Charlesworth D (1993) The effect of deleterious mutations on neutral molecular variation. Genetics 134, 1289 1303. (Pubitemid 23220050)
5. Charmet G, Balfourier F Chatard V (1996) Taxonomic relationships and interspecific hybridization in the genus Lolium (grasses). Genetic Resources and Crop Evolution 43, 319 327. (Pubitemid 126705960)
6. Charmet G, Ravel C Balfourier F (1997) Phylogenetic analysis in the Festuca-Lolium complex using molecular markers and ITS rDNA. Theoretical and Applied Genetics 94, 1038 1046. (Pubitemid 27299562)
7. Christopher JT, Powles SB, Liljegren DR Holtum JAM (1991) Cross-resistance to herbicides in annual ryegrass (Lolium rigidum). II. Chlorsulfuron resistance involves a wheat-like detoxification system. Plant Physiology 95, 1036 1043. (Pubitemid 21913919)
8. Christopher JT, Powles SB Holtum JAM (1992) Resistance to acetolactate synthase-inhibiting herbicides in annual ryegrass (Lolium rigidum) involves at least two mechanisms. Plant Physiology 100, 1909 1913.
9. Corbett C-AL Tardif FJ (2006) Detection of resistance to acetolactate synthase inhibitors in weeds with emphasis on DNA-based techniques: a review. Pest Management Science 62, 584 597. (Pubitemid 44031309)
10. Corpet F (1988) Multiple sequence alignment with hierarchical clustering. Nucleic Acids Research 16, 10881 10890.
11. Délye C Boucansaud K (2008) A molecular assay for the proactive detection of target site-based resistance to herbicides inhibiting acetolactate synthase in Alopecurus myosuroides. Weed Research 48, 97 101.
12. Délye C, Matéjicek A Gasquez J (2002) PCR-based detection of resistance to acetyl-CoA carboxylase-inhibiting herbicides in black-grass (Alopecurus myosuroides Huds) and ryegrass (Lolium rigidum Gaud). Pest Management Science 58, 474 478. (Pubitemid 34453471)
13. Délye C, Zhang X-Q, Chalopin C, Michel S Powles SB (2003) An isoleucine residue within the carboxyl-transferase domain of multidomain acetyl-CoA carboxylase is a major determinant of sensitivity to aryloxyphenoxypropionate, but not to cyclohexanedione inhibitors. Plant Physiology 132, 1717 1724. (Pubitemid 36872917)
14. Délye C, Straub C, Michel S Le Corre V (2004) Nucleotide variability at the acetyl coenzyme A carboxylase gene and the signature of herbicide selection in the grass weed Alopecurus myosuroides (Huds.). Molecular Biology and Evolution 21, 884 892. (Pubitemid 38529730)
15. Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series 41, 95 98.
16. Heap I (2008) International Survey of Herbicide Resistant Weeds (available at: http://www.weedscience.com ; last accessed 10 February 2009).
17. Humphreys MW, Yadav RS, Cairns AJ, Turner LB, Humphreys J Skøt L (2006) A changing climate for grassland research. New Phytologist 169, 9 26.
18. Martínez-Ghersa MA, Ghersa CM, Vila-Aiub MM, Satorre EH Radosevich SR (1997) Evolution of resistance to diclofop-methyl in rye-grass (Lolium multiflorum): investigation of the role of introgression with related species. Pesticide Science 51, 305 308. (Pubitemid 27515334)
19. McCourt JA Duggleby RG (2006) Acetohydroxyacid synthase and its role in the biosynthetic pathway for branched-chain amino-acids. Amino Acids 31, 173 210. (Pubitemid 44222578)
20. Neff MM, Neff JD, Chory J Pepper AE (1998) dCAPS, a simple technique for the genetic analysis of single nucleotide polymorphisms: experimental applications in Arabidopsis thaliana genetics. Plant Journal 14, 387 392. (Pubitemid 28236003)
21. Neff MM, Turk E Kalishman M (2002) Web-based primer design for single nucleotide polymorphism analysis. Trends in Genetics 18, 613 615. (Pubitemid 35346679)
22. Owen MJ, Walsh MJ, Llewellyn RS Powles SB (2007) Widespread occurrence of multiple herbicide resistance in Western Australian annual ryegrass (Lolium rigidum) populations. Australian Journal of Agricultural Research 58, 711 718. (Pubitemid 47123442)
23. Preston C Powles SB (2002) Evolution of herbicide resistance in weeds: initial frequency of target site-based resistance to acetolactate synthase-inhibiting herbicides in Lolium rigidum. Heredity 88, 8 13. (Pubitemid 34171971)
24. Tajima F (1996) The amount of DNA polymorphism maintained in a finite population when the neutral mutation rate varies among sites. Genetics 143, 1457 1465. (Pubitemid 26238576)
25. Tan M-K Medd RW (2002) Characterisation of the acetolactate synthase (ALS) gene of Raphanus raphanistrum L. and the molecular assay of mutations associated with herbicide resistance. Plant Science 163, 195 205.
26. Tan M-K, Preston C Wang G-X (2007) Molecular basis of multiple resistance to ACCase-inhibiting herbicides in Lolium rigidum. Weed Research 47, 534 541. (Pubitemid 350076040)
27. Tranel PJ Wright TR (2002) Resistance of weeds to ALS-inhibiting herbicides: what have we learned? Weed Science 50, 700 712. (Pubitemid 43666268)
28. Tranel PJ, Jiang W, Patzoldt WL Wright TR (2004) Intraspecific variability of the acetolactate synthase gene. Weed Science 52, 236 241. (Pubitemid 44272372)
29. Tranel PJ, Wright TR Heap IN (2008) ALS Mutations from Resistant Weeds (available at: http://www.weedscience.org ; last accessed 10 February 2009).
30. Wagner J, Haas HU Hurle K (2002) Identification of ALS inhibitor-resistant Amaranthus biotypes using polymerase chain reaction amplification of specific alleles. Weed Research 42, 280 286.
31. Wang G-X, Tan M-K, Rakshit S et al. (2007) Discovery of single-nucleotide mutations in acetolactate synthase genes by ecotilling. Pesticide Biochemistry and Physiology 88, 143 148. (Pubitemid 46452721)
32. Whaley CM, Wilson HP Westwood JH (2007) A new mutation in plant ALS confers resistance to five classes of ALS-inhibiting herbicides. Weed Science 55, 83 90. (Pubitemid 46588527)