-
1
-
-
41249096306
-
Using quality scores and longer reads improves accuracy of Solexa read mapping
-
2335322 18307793
-
Smith A Xuan Z Zhang M Using quality scores and longer reads improves accuracy of Solexa read mapping BMC Bioinformatics 2008, 9:128. 2335322 18307793
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 128
-
-
Smith, A.1
Xuan, Z.2
Zhang, M.3
-
2
-
-
40049104732
-
SOAP: Short oligonucleotide alignment program
-
18227114
-
Li R Li Y Kristiansen K Wang J SOAP: Short oligonucleotide alignment program Bioinformatics 2008, 24:713-714. 18227114
-
(2008)
Bioinformatics
, vol.24
, pp. 713-714
-
-
Li, R.1
Li, Y.2
Kristiansen, K.3
Wang, J.4
-
4
-
-
43349089437
-
GeneTrack - A genomic data processing and visualization framework
-
18388141
-
Albert I Wachi S Jiang C Pugh BF GeneTrack - a genomic data processing and visualization framework Bioinformatics 2008, 24:1305-1306. 18388141
-
(2008)
Bioinformatics
, vol.24
, pp. 1305-1306
-
-
Albert, I.1
Wachi, S.2
Jiang, C.3
Pugh, B.F.4
-
5
-
-
38049150833
-
Automation of in-silico data analysis processes through workflow management systems
-
18056132
-
Romano P Automation of in-silico data analysis processes through workflow management systems Briefings in Bioinformatics 2008, 9:57-68. 18056132
-
(2008)
Briefings in Bioinformatics
, vol.9
, pp. 57-68
-
-
Romano, P.1
-
6
-
-
0037046558
-
Creating a bioinformatics nation - A web-services model will allow biological data to be fully exploited
-
12000935
-
Stein L Creating a bioinformatics nation - A web-services model will allow biological data to be fully exploited Nature 2002, 417:119-120. 12000935
-
(2002)
Nature
, vol.417
, pp. 119-120
-
-
Stein, L.1
-
7
-
-
33846088142
-
The Molecular Biology Database Collection: 2006 update
-
1347524 16381871
-
Galperin MY The Molecular Biology Database Collection: 2006 update Nucleic Acids Research 2006, 34:D3-5. 1347524 16381871
-
(2006)
Nucleic Acids Research
, vol.34
-
-
Galperin, M.Y.1
-
8
-
-
33846088142
-
The Molecular Biology Database Collection: 2007 update
-
1761423 17148484
-
Galperin MY The Molecular Biology Database Collection: 2007 update Nucleic Acids Research 2007, 35:D3-D4. 1761423 17148484
-
(2007)
Nucleic Acids Research
, vol.35
-
-
Galperin, M.Y.1
-
9
-
-
38549098540
-
The molecular biology database collection: 2008 update
-
2238887 18025043
-
Galperin MY The molecular biology database collection: 2008 update Nucleic Acids Research 2008, 36:D2-D4. 2238887 18025043
-
(2008)
Nucleic Acids Research
, vol.36
-
-
Galperin, M.Y.1
-
10
-
-
38549170427
-
Priorities for nucleotide trace, sequence and annotation data capture at the Ensembl Trace Archive and the EMBL Nucleotide Sequence Database
-
2238915 18039715
-
Cochrane G Akhtar R Aldebert P Althorpe N Baldwin A Bates K Bhattacharyya S Bonfield J Bower L Browne P Castro M Cox T Demiralp F Eberhardt R Faruque N Hoad G Jang M Kulikova T Labarga A Leinonen R Leonard S Lin Q Lopez R Lorenc D McWilliam H Mukherjee G Nardone F Plaister S Robinson S Sobhany S Vaughan R Wu D Zhu W Apweiler R Hubbard T Birney E Priorities for nucleotide trace, sequence and annotation data capture at the Ensembl Trace Archive and the EMBL Nucleotide Sequence Database Nucl Acids Res 2008, 36:D5-12. 2238915 18039715
-
(2008)
Nucl Acids Res
, vol.36
-
-
Cochrane, G.1
Akhtar, R.2
Aldebert, P.3
Althorpe, N.4
Baldwin, A.5
Bates, K.6
Bhattacharyya, S.7
Bonfield, J.8
Bower, L.9
Browne, P.10
Castro, M.11
Cox, T.12
Demiralp, F.13
Eberhardt, R.14
Faruque, N.15
Hoad, G.16
Jang, M.17
Kulikova, T.18
Labarga, A.19
Leinonen, R.20
Leonard, S.21
Lin, Q.22
Lopez, R.23
Lorenc, D.24
McWilliam, H.25
Mukherjee, G.26
Nardone, F.27
Plaister, S.28
Robinson, S.29
Sobhany, S.30
Vaughan, R.31
Wu, D.32
Zhu, W.33
Apweiler, R.34
Hubbard, T.35
Birney, E.36
more..
-
12
-
-
33644522932
-
Archetypes: Constraint-based domain models for future-proof information systems
-
Baclawski K, Kilov H
-
Beale T Archetypes: Constraint-based domain models for future-proof information systems OOPSLA; 4-8 November 2002; Seattle Baclawski K, Kilov H 2002:16-32.
-
(2002)
OOPSLA; 4-8 November 2002; Seattle
, pp. 16-32
-
-
Beale, T.1
-
13
-
-
27644456295
-
An analysis of extensible modelling for functional genomics data
-
1262694 16188029
-
Jones AR Paton NW An analysis of extensible modelling for functional genomics data Bmc Bioinformatics 2005, 6:235. 1262694 16188029
-
(2005)
Bmc Bioinformatics
, vol.6
, pp. 235
-
-
Jones, A.R.1
Paton, N.W.2
-
17
-
-
0003885423
-
-
Boston, MA: Addison-Wesley Longman Publishing Co., Inc 8
-
Sommerville I Software Engineering Boston, MA: Addison-Wesley Longman Publishing Co., Inc 8 2006.
-
(2006)
Software Engineering
-
-
Sommerville, I.1
-
20
-
-
1642398074
-
Architecture and design of adaptive object-models
-
Yoder JW Balaguer F Johnson R Architecture and design of adaptive object-models SIGPLAN Not 2001, 36:50-60.
-
(2001)
SIGPLAN Not
, vol.36
, pp. 50-60
-
-
Yoder, J.W.1
Balaguer, F.2
Johnson, R.3
-
26
-
-
85008028648
-
On To Components
-
Meyer B On To Components Computer 1999, 32:139-140.
-
(1999)
Computer
, vol.32
, pp. 139-140
-
-
Meyer, B.1
-
31
-
-
0028446067
-
Using semantic values to facilitate interoperability among heterogeneous information systems
-
Sciore E Siegel M Rosenthal A Using semantic values to facilitate interoperability among heterogeneous information systems ACM Trans Database Syst 1994, 19:254-290.
-
(1994)
ACM Trans Database Syst
, vol.19
, pp. 254-290
-
-
Sciore, E.1
Siegel, M.2
Rosenthal, A.3
-
32
-
-
0034069495
-
Gene Ontology: Tool for the unification of biology
-
10802651
-
Ashburner M Ball CA Blake JA Botstein D Butler H Cherry JM Davis AP Dolinski K Dwight SS Eppig JT Harris MA Hill DP Issel-Tarver L Kasarskis A Lewis S Matese JC Richardson JE Ringwald M Rubin GM Sherlock G Gene Ontology: Tool for the unification of biology Nature Genetics 2000, 25:25-29. 10802651
-
(2000)
Nature Genetics
, vol.25
, pp. 25-29
-
-
Ashburner, M.1
Ball, C.A.2
Blake, J.A.3
Botstein, D.4
Butler, H.5
Cherry, J.M.6
Davis, A.P.7
Dolinski, K.8
Dwight, S.S.9
Eppig, J.T.10
Harris, M.A.11
Hill, D.P.12
Issel-Tarver, L.13
Kasarskis, A.14
Lewis, S.15
Matese, J.C.16
Richardson, J.E.17
Ringwald, M.18
Rubin, G.M.19
Sherlock, G.20
more..
-
33
-
-
33748792021
-
Bio-ontologies: Current trends and future directions
-
1847325 16899495
-
Bodenreider O Stevens R Bio-ontologies: Current trends and future directions Brief Bioinform 2006, 7:256-274. 1847325 16899495
-
(2006)
Brief Bioinform
, vol.7
, pp. 256-274
-
-
Bodenreider, O.1
Stevens, R.2
-
39
-
-
0034117360
-
TAMBIS: Transparent Access to Multiple Bioinformatics Information Sources
-
10842744
-
Stevens R Baker P Bechhofer S Ng G Jacoby A Paton NW Goble CA Brass A TAMBIS: Transparent Access to Multiple Bioinformatics Information Sources Bioinformatics 2000, 16:184-186. 10842744
-
(2000)
Bioinformatics
, vol.16
, pp. 184-186
-
-
Stevens, R.1
Baker, P.2
Bechhofer, S.3
Ng, G.4
Jacoby, A.5
Paton, N.W.6
Goble, C.A.7
Brass, A.8
-
40
-
-
35148889036
-
The Functional Genomics Experiment model (FuGE): An extensible framework for standards in functional genomics
-
17921998
-
Jones AR Miller M Aebersold R Apweiler R Ball CA Brazma A DeGreef J Hardy N Hermjakob H Hubbard SJ Hussey P Igra M Jenkins H Julian RK Laursen K Oliver SG Paton NW Sansone SA Sarkans U Stoeckert CJ Taylor CF Whetzel PL White JA Spellman P Pizarro A The Functional Genomics Experiment model (FuGE): An extensible framework for standards in functional genomics Nature Biotechnology 2007, 25:1127-1133. 17921998
-
(2007)
Nature Biotechnology
, vol.25
, pp. 1127-1133
-
-
Jones, A.R.1
Miller, M.2
Aebersold, R.3
Apweiler, R.4
Ball, C.A.5
Brazma, A.6
DeGreef, J.7
Hardy, N.8
Hermjakob, H.9
Hubbard, S.J.10
Hussey, P.11
Igra, M.12
Jenkins, H.13
Julian, R.K.14
Laursen, K.15
Oliver, S.G.16
Paton, N.W.17
Sansone, S.A.18
Sarkans, U.19
Stoeckert, C.J.20
Taylor, C.F.21
Whetzel, P.L.22
White, J.A.23
Spellman, P.24
Pizarro, A.25
more..
-
41
-
-
0037163144
-
Design and implementation of microarray gene expression markup language (MAGE-ML)
-
Spellman P Miller M Stewart J Troup C Sarkans U Chervitz S Bernhart D Sherlock G Ball C Lepage M Swiatek M Marks WL Goncalves J Markel S Iordan D Shojatalab M Pizarro A White J Hubley R Deutsch E Senger M Aronow B Robinson A Bassett D Stoeckert C Brazma A Design and implementation of microarray gene expression markup language (MAGE-ML) Genome Biology 2002, 3 research0046.0041 research0046.0049.
-
(2002)
Genome Biology
, vol.3
-
-
Spellman, P.1
Miller, M.2
Stewart, J.3
Troup, C.4
Sarkans, U.5
Chervitz, S.6
Bernhart, D.7
Sherlock, G.8
Ball, C.9
Lepage, M.10
Swiatek, M.11
Marks, W.L.12
Goncalves, J.13
Markel, S.14
Iordan, D.15
Shojatalab, M.16
Pizarro, A.17
White, J.18
Hubley, R.19
Deutsch, E.20
Senger, M.21
Aronow, B.22
Robinson, A.23
Bassett, D.24
Stoeckert, C.25
Brazma, A.26
more..
|