Locked 5Zs-biliverdin blocks the Meta-RA to Meta-RC transition in the functional cycle of bacteriophytochrome Agp1

FEBS Letters

Volumn 581, Issue 28, 2007, Pages 5425-5429

  Seibeck, Sven ^a   Borucki, Berthold ^a   Otto, Harald ^a   Inomata, Katsuhiko ^b   Khawn, Htoi ^b   Kinoshita, Hideki ^b   Michael, Norbert ^a   Lamparter, Tilman ^a   Heyn, Maarten P ^a  

^a FREIE UNIVERSITÄT BERLIN   (Germany)

^b KANAZAWA UNIVERSITY   (Japan)

Author keywords

Biliverdin; Photoreceptor; Phytochrome

Indexed keywords

AGP1 BACTERIOPHYTOCHROME; BILIVERDIN; PHYTOCHROME; UNCLASSIFIED DRUG;

ARTICLE; CHEMICAL BOND; CONFORMATION; PRIORITY JOURNAL; SPECTRUM;

AMINO ACID TRANSPORT SYSTEMS, NEUTRAL; BACTERIAL PROTEINS; BILIVERDINE; CIRCULAR DICHROISM; HYDROGEN-ION CONCENTRATION; KINETICS; LIGHT; MOLECULAR STRUCTURE; PHOTOCHEMISTRY; PHYTOCHROME; PROTONS;

EID: 36049048341     PISSN: 00145793     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.febslet.2007.10.043     Document Type: Article

References (20)

1. Rockwell N.C., Su Y.S., and Lagarias J.C. Phytochrome structure and signaling mechanisms. Ann. Rev. Plant Biol. 57 (2006) 837-858
2. Wagner J.R., Brunzelle J.S., Forest K.T., and Vierstra R.D. A light-sensing knot revealed by the structure of the chromophore-binding domain of phytochrome. Nature 438 (2005) 325-331
3. Wagner J.R., Zhang J., Brunzelle J.S., Vierstra R.D., and Forest K.T. High resolution structure of Deinococcus bacteriophytochrome yields new insights into phytochrome architecture and evolution. J. Biol. Chem. 282 (2007) 12298-12309
4. Yang X., Stojkovic E.A., Kuk J., and Moffat K. Crystal structure of the chromophore binding domain of an unusual bacteriophytochrome, RpBphP3, reveals residues that modulate photo conversion. Proc. Natl. Acad. Sci. USA 104 (2007) 12571-12576
5. van Thor J.J., Ronayne K.L., and Towrie M. Formation of the early photoproduct Lumi-R of cyanobacterial phytochrome Cph1 observed by ultrafast mid-infrared spectroscopy. J. Am. Chem. Soc. 129 (2007) 126-132
6. Schumann C., Gross R., Michael N., Lamparter T., and Diller R. Sub-picosecond mid-infrared spectroscopy of the phytochrome Agp1 from Agrobacterium tumefaciens. ChemPhysChem 8 (2007) 1657-1663
7. Mroginski M.A., Murgida D.H., von Stetten D., Kneip C., Mark F., and Hildebrandt P. Determination of the chromophore structures in the photoinduced reaction cycle of phytochrome. J. Am. Chem. Soc. 126 (2004) 16734-16735
8. van Thor J.J., Mackeen M., Kuprov I., Dwek R.A., and Wormald M.R. Chromophore structure in the photocycle of the cyanobacterial phytochrome Cph1. Biophys. J. 91 (2006) 1811-1822
9. 15N MAS NMR studies of Cph1 phytochrome: chromophore dynamics and intramolecular signal transduction. J. Phys. Chem. B 110 (2006) 20580-20585
10. Bhattacharya S., Marti T., Otto H., Heyn M.P., and Khorana H.G. A bacteriorhodopsin analog reconstituted with a nonisomerizable 13-trans retinal derivative displays light insensitivity. J. Biol. Chem. 267 (1992) 6757-6762
11. fr-like adducts. J. Biol. Chem. 280 (2005) 24491-24497
12. Inomata K., Noack S., Hamman M.A.S., Khawn H., Kinoshita H., Murata Y., Michael N., Scheerer P., Krauss N., and Lamparter T. Assembly of synthetic locked chromophores with Agrobacterium phytochromes Agp1 and Agp2. J. Biol. Chem. 281 (2006) 28162-28173
13. fr formation. J. Biol. Chem. 282 (2007) 2116-2123
14. Borucki B., von Stetten D., Seibeck S., Lamparter T., Michael N., Mroginski M.A., Otto H., Murgida D.H., Heyn M.P., and Hildebrandt P. Light-induced proton release of phytochrome is coupled to the transient deprotonation of the tetrapyrrole chromophore. J. Biol. Chem. 280 (2005) 34358-34364
15. van Thor J.J., Borucki B., Crielaard W., Otto H., Lamparter T., Hughes J., Hellingwerf K.J., and Heyn M.P. Light-induced proton release and proton uptake reactions in cyanobacterial phytochrome Cph1. Biochemistry 40 (2001) 11460-11471
16. Borucki B. Proton transfer in the photoreceptors phytochrome and photoactive yellow protein. Photochem. Photobiol. Sci. 5 (2006) 553-566
17. Borucki B., Otto H., Rottwinkel G., Hughes J., Heyn M.P., and Lamparter T. Mechanism of Cph1 phytochrome assembly from stopped-flow kinetics and circular dichroism. Biochemistry 42 (2003) 13684-13697
18. Scharnagl C., Köst-Reyes E., and Schneider S. Circular dichroism of chromopeptides from phycocyanin. Z. Naturforsch. 38c (1983) 951-959
19. Giraud E., Zappa S., Vuillet L., Adriano J.-M., Hannibal L., Fardoux J., Berthomieu C., Boyer P., Pignol D., and Verméglio A. A new type of bacteriophytochrome acts in tandem with a classical bacteriophytochrome to control the antennae synthesis in Rhodopseudomonas palustris. J. Biol. Chem. 28 (2005) 32389-32397
20. Kyndt J.A., Fitch J.C., Meyer T.E., and Cusanovich M.A. The photoactivated PYP domain of Rhodospirillum centenum Ppr accelerates the recovery of the bacteriophytochrome domain after white light illumination. Biochemistry 46 (2007) 8256-8262