Molecular analysis of tea clones (Camellia sinensis) using AFLP markers

International Journal of Integrative Biology

Volumn 5, Issue 2, 2009, Pages 130-135

  Mishra, Rajan Kumar ^a   Chaudhury, Sandip ^a   Ahmad, Altaf ^a   Pradhan, M ^b   Siddiqi, Tariq O ^a  

^a HAMDARD UNIVERSITY   (India)

^b RAVENSHAW UNIVERSITY   (India)

Author keywords

AFLP; Camellia; DNA fingerprinting; Genetic marker

Indexed keywords

GENOMIC DNA; PLANT DNA;

AMPLIFIED FRAGMENT LENGTH POLYMORPHISM; ARTICLE; CHINA; CONTROLLED STUDY; GENE POOL; GENETIC MARKER; GENETIC POLYMORPHISM; GENETIC VARIABILITY; GEOGRAPHIC DISTRIBUTION; INDIA; MOLECULAR CLONING; MORPHOLOGICAL TRAIT; NONHUMAN; PLANT GENOME; STRUCTURAL HOMOLOGY; TEA;

CAMELLIA; CAMELLIA SINENSIS;

EID: 65549123669     PISSN: 09738363     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (32)

1. Banerjee B (1992) Botanical classifications of tea. in Tea: Cultivation to consumption, Chapman and Hall, London, ISSN 0412338505 pp: 25-51.
2. Fuentes JL, Escobar F, et al. (1999) Analysis of genetic diversity in Cuban rice varieties using isozyme, RAPD and AFLP markers. Euphytica. 109: 107-115.
3. Jaccard A (1908) Nouvelies researchers sur la distribution florale. Bulletm la Socete Vaudoise de Siences Naturalles. 44: 223-270.
4. Jones DA, Thomas CM, et al. (1997) Isolation of the tomato Cf-9 gene for resistance to Cladosporium fulvum by transposon tagging. Science. 266: 789-793.
5. Joshi SP, Ranjekar PK, et al. (1999) Molecular markers in plant genome analysis. Curr. Sci. 77: 230-240.
6. Kingdon-ward F. (1950) Does wild tea exist? Nature. 165: 297-299.
7. Lanteri S, Saba E, et al. (2004) Amplified fragment length polymorphism for genetic diversity assessment in globe artichoke. Theor. Appl. Genet. 108: 1534-1544.
8. Lynch M and Milligan BG (1994) Analysis of population genetic structure writh RAPD markers. Mol. Ecol. 3: 91-99.
9. Mackill DJ (1995) Classifying japonica rice cultivars with RAPD markers. Crop Sci. 35: 889-894.
10. Mackill DJ, Zhang E, et al. (1996) Level of polymorphism and genetic mapping of AFLP markers in rice. Genome. 39: 969-977.
11. Magoma GN, Wachira FN, Obanda M, Imbuga M et al (2000) The use of catechins as biochemical markers in diversity studies of tea (Camellia sinensis). Genet. Resour. Crop Evol. 47: 107-114.
12. Marsolais JV, Pringle JS, et al. (1993) Assessment of random amplified polymorphic DNA (RAPD) as genetic-markers for determining the origin of interspecific lilac hybrids. Taxon. 42: 531-537.
13. Matsumoto S, Takeuchi A, et al. (1994) Molecular cloning of phenylalanine ammonia-lyase cDNA and classification of varieties of tea plants (Camellia sinensis) using tea Pal cDNA probe. Theor. Appl. Genet. 89: 671-675.
14. Nagata T and Sakai S (1984) Differences in caffeine, flavanols and amino acid contents in leaves of cultivated species of Camellia. Jpn J Bred. 34: 459-467.
15. Orozco-Castillo C, Chalmers KJ, et al. (1994) Detection of genetic diversity and selective gene introgression in coffee using RAPD markers. Theor. Appl. Genet. 87: 934-940.
16. Paul S, Wachira FN, et al. (1997) Diversity and genetic differentiation among populations of Indian and Kenyan tea (Camellia sinensis L) O. Kuntze) revealed by AFLP markers. Theor. Appl. Genet., 94: 255-263
17. Robert EAH, Wight W, et al. (1958) Paper chromatography as an aid in the taxonomy of Theo Camellia's. New Phytol. 57(2): 211-225.
18. Rohlf FJ (1992) NTSYS-pc. Numerical Taxonomy and multivariate analysis system(version 2.02). Exeter Software, Setauket, NY.
19. Sealy J (1958) A revision of genus Camellia. R Hortic. Soc., London.
20. Skroch PW and Nienhuis J (1995) Qualitative and quantitative characterization of RAPD variation among snap bean (Phaseolus vulgaris) genotypes. Theor. Appl. Genet. 91: 1078-1085.
21. Sobral BWS and Honeycutt RJ (1993) High output genetic mapping in polyploids using PCR-generated markers. Theor. Appl. Genet. 86: 105-112.
22. Song BK, Clyde MM, et al. (2000) Genetic relatedness among Lansium domesticum accessions using RAPD Markers. Ann Bot. 86: 299-307.
23. Sul IW, Korban SS (1996) A highly efficient method for isolating genomic DNA from plant tissues. Int Assoc Plant Tissue Cult. 2: 113-116.
24. Takeda Y and Toyao T (1980) Identification and classification of the green tea varieties by the morphological characters of flower organs. Tea Res. J. 52: 1-6.
25. Thomas CM, Vos P, et al. (1995) Identification of amplified restriction fragment polymorphism (AFLP) markers tightly linked to the tomato Cf-9 gene for resistance to Claosporium fulvum. Plant J. 5: 785-794.
26. Volis S, Yakbov B, et al. (2001) Tests for adaptive RAPD variation in population genetic structure of wild barley (Hordeum spontaneum Koch). Biol. J. Linn. Soc. 74: 289-303.
27. Vos P, Hogers M, et al. (1995) AFLP: a new concept for DNA fingerprinting. Nucl. Acids Res. 23: 4407-4414.
28. Vos P and Kuiper M (1997) AFLP analysis. In: DNA markers: Protocols, Applications and Overviews. G. Caetano-Anolles and P.M. Gresshoff, eds. J. Wiley and Sons, inc., New York pp. 115-131.
29. Wachira FNR, Waugh R, et al. (1995) Detection of genetic diversity in tea (Camellia sinensis) using RAPD markers. Genome 38: 201-210.
30. Wight W (1959) Nomenclature and classification of the tea plant. Nature. 183: 1726-1728.
31. Wight W (1962) Tea classification revised. Curr. Sc., 31: 298-299.
32. Wood DJ and Barua DN (1958) Species hybrids of tea. Nature. 181: 1674-1675.