-
1
-
-
0027278557
-
Instability and decay of the primary structure of DNA
-
Lindahl,T. (1993) Instability and decay of the primary structure of DNA. Nature, 362, 709-715.
-
(1993)
Nature
, vol.362
, pp. 709-715
-
-
Lindahl, T.1
-
2
-
-
0028675314
-
Reconstitution of the DNA base excision-repair pathway
-
Dianov,G. and Lindahl,T. (1994) Reconstitution of the DNA base excision-repair pathway. Curr. Biol., 4, 1069-1076.
-
(1994)
Curr. Biol
, vol.4
, pp. 1069-1076
-
-
Dianov, G.1
Lindahl, T.2
-
3
-
-
0029842307
-
Reconstitution of DNA base excision-repair with purified human proteins: Interaction between DNA polymerase beta and the XRCC1 protein
-
Kubota,Y., Nash,R.A., Klungland,A., Schar,P., Barnes,D.E. and Lindahl,T. (1996) Reconstitution of DNA base excision-repair with purified human proteins: Interaction between DNA polymerase beta and the XRCC1 protein. EMBO J., 15, 6662-6670.
-
(1996)
EMBO J
, vol.15
, pp. 6662-6670
-
-
Kubota, Y.1
Nash, R.A.2
Klungland, A.3
Schar, P.4
Barnes, D.E.5
Lindahl, T.6
-
4
-
-
0030957997
-
Second pathway for completion of human DNA base excision-repair: Reconstitution with purified proteins and requirement for DNase IV (FEN1)
-
Klungland,A. and Lindahl,T. (1997) Second pathway for completion of human DNA base excision-repair: Reconstitution with purified proteins and requirement for DNase IV (FEN1). EMBO J., 16, 3341-3348.
-
(1997)
EMBO J
, vol.16
, pp. 3341-3348
-
-
Klungland, A.1
Lindahl, T.2
-
5
-
-
0041589201
-
Enzymology of base excision repair in the hyperthermophilic archaeon Pyrobaculum aerophilum
-
Sartori,A.A. and Jiricny,J. (2003) Enzymology of base excision repair in the hyperthermophilic archaeon Pyrobaculum aerophilum. J. Biol. Chem. 278, 24563-24576.
-
(2003)
J. Biol. Chem
, vol.278
, pp. 24563-24576
-
-
Sartori, A.A.1
Jiricny, J.2
-
6
-
-
0028857681
-
The base excision repair pathway
-
Seeberg,E., Eide,L. and Bjoras,M. (1995) The base excision repair pathway. Trends Biochem. Sci., 20, 391-397.
-
(1995)
Trends Biochem. Sci
, vol.20
, pp. 391-397
-
-
Seeberg, E.1
Eide, L.2
Bjoras, M.3
-
7
-
-
0034734383
-
Structure and function in the uracil-DNA glycosylase superfamily
-
Pearl,L.H. (2000) Structure and function in the uracil-DNA glycosylase superfamily. Mutat. Res., 460, 165-181.
-
(2000)
Mutat. Res
, vol.460
, pp. 165-181
-
-
Pearl, L.H.1
-
8
-
-
15644383855
-
Complete genome sequence of Methanobacterium thermoautotrophicum deltaH: Functional analysis and comparative genomics
-
Smith,D.R., Doucette-Stamm,L.A., Deloughery,C., Lee,H., Dubois,J., Aldredge,T., Bashirzadeh,R., Blakely,D., Cook,R., Gilbert,K. et al. (1997) Complete genome sequence of Methanobacterium thermoautotrophicum deltaH: Functional analysis and comparative genomics. J. Bacteriol., 179, 7135-7155.
-
(1997)
J. Bacteriol
, vol.179
, pp. 7135-7155
-
-
Smith, D.R.1
Doucette-Stamm, L.A.2
Deloughery, C.3
Lee, H.4
Dubois, J.5
Aldredge, T.6
Bashirzadeh, R.7
Blakely, D.8
Cook, R.9
Gilbert, K.10
-
9
-
-
33751012715
-
The Methanothermobacter thermautotrophicus ExoIII homologue Mth212 is a DNA uridine endonuclease
-
Georg,J., Schomacher,L., Chong,J.P., Majernik,A.I., Raabe,M., Urlaub,H., Muller,S., Ciirdaeva,E., Kramer,W. and Fritz,H.J. (2006) The Methanothermobacter thermautotrophicus ExoIII homologue Mth212 is a DNA uridine endonuclease. Nucleic Acids Res., 34, 5325-5336.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 5325-5336
-
-
Georg, J.1
Schomacher, L.2
Chong, J.P.3
Majernik, A.I.4
Raabe, M.5
Urlaub, H.6
Muller, S.7
Ciirdaeva, E.8
Kramer, W.9
Fritz, H.J.10
-
10
-
-
13844320315
-
A recombinant exonuclease III homologue of the thermophilic archaeon Methanothermobacter thermautotrophicus
-
Pfeifer,S. and Greiner-Stoffele,T. (2005) A recombinant exonuclease III homologue of the thermophilic archaeon Methanothermobacter thermautotrophicus. DNA Repair, 4, 433-444.
-
(2005)
DNA Repair
, vol.4
, pp. 433-444
-
-
Pfeifer, S.1
Greiner-Stoffele, T.2
-
11
-
-
0029065955
-
Gene disruption in Escherichia coli: TcR and KmR cassettes with the option of Flp-catalyzed excision of the antibiotic-resistance determinant
-
Cherepanov,P.P. and Wackernagel,W. (1995) Gene disruption in Escherichia coli: TcR and KmR cassettes with the option of Flp-catalyzed excision of the antibiotic-resistance determinant. Gene 158, 9-14.
-
(1995)
Gene
, vol.158
, pp. 9-14
-
-
Cherepanov, P.P.1
Wackernagel, W.2
-
12
-
-
0034612342
-
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
-
Datsenko,K.A. and Wanner,B.L. (2000) One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc. Natl Acad. Sci. USA, 97, 6640-6645.
-
(2000)
Proc. Natl Acad. Sci. USA
, vol.97
, pp. 6640-6645
-
-
Datsenko, K.A.1
Wanner, B.L.2
-
13
-
-
13444306705
-
A novel nuclease-ATPase (Nar71) from archaea is part of a proposed thermophilic DNA repair system
-
Guy,C.P., Majernik,A.I., Chong,J.P. and Bolt,E.L. (2004) A novel nuclease-ATPase (Nar71) from archaea is part of a proposed thermophilic DNA repair system. Nucleic Acids Res., 32, 6176-6186.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 6176-6186
-
-
Guy, C.P.1
Majernik, A.I.2
Chong, J.P.3
Bolt, E.L.4
-
14
-
-
0033214481
-
Isolation and characterization of a split B-type DNA polymerase from the archaeon Methanobacterium thermoautotrophicum deltaH
-
Kelman,Z., Pietrokovski,S. and Hurwitz,J. (1999) Isolation and characterization of a split B-type DNA polymerase from the archaeon Methanobacterium thermoautotrophicum deltaH. J. Biol. Chem., 274, 28751-28761.
-
(1999)
J. Biol. Chem
, vol.274
, pp. 28751-28761
-
-
Kelman, Z.1
Pietrokovski, S.2
Hurwitz, J.3
-
15
-
-
0017184389
-
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
-
Bradford,M.M. (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem., 72, 248-254.
-
(1976)
Anal. Biochem
, vol.72
, pp. 248-254
-
-
Bradford, M.M.1
-
16
-
-
0037052965
-
A novel type of uracil-DNA glycosylase mediating repair of hydrolytic DNA damage in the extremely thermophilic eubacterium Thermus thermophilus
-
Starkuviene,V. and Fritz,H.J. (2002) A novel type of uracil-DNA glycosylase mediating repair of hydrolytic DNA damage in the extremely thermophilic eubacterium Thermus thermophilus. Nucleic Acids Res., 30, 2097-2102.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 2097-2102
-
-
Starkuviene, V.1
Fritz, H.J.2
-
17
-
-
0027013049
-
Fast quantitative assay of sequence-specific endonuclease activity based on DNA sequencer technology
-
Gläsner,W., Merkl,R., Schmidt,S., Cech,D. and Fritz,H.J. (1992) Fast quantitative assay of sequence-specific endonuclease activity based on DNA sequencer technology. Biol. Chem. Hoppe. Seyler, 373, 1223-1225.
-
(1992)
Biol. Chem. Hoppe. Seyler
, vol.373
, pp. 1223-1225
-
-
Gläsner, W.1
Merkl, R.2
Schmidt, S.3
Cech, D.4
Fritz, H.J.5
-
18
-
-
34547567980
-
OligoCalc: An online oligonucleotide properties calculator
-
Kibbe,W.A. (2007) OligoCalc: An online oligonucleotide properties calculator. Nucleic Acids Res., 35, W43-W46.
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Kibbe, W.A.1
-
19
-
-
0032998425
-
Polymorphism identification and quantitative detection of genomic DNA by invasive cleavage of oligonucleotide probes
-
Lyamichev,V., Mast,A.L., Hall,J.G., Prudent,J.R., Kaiser,M.W., Takova,T., Kwiatkowski,R.W., Sander,T.J., de Arruda,M., Arco,D.A. et al. (1999) Polymorphism identification and quantitative detection of genomic DNA by invasive cleavage of oligonucleotide probes. Nat. Biotechnol., 17, 292-296.
-
(1999)
Nat. Biotechnol
, vol.17
, pp. 292-296
-
-
Lyamichev, V.1
Mast, A.L.2
Hall, J.G.3
Prudent, J.R.4
Kaiser, M.W.5
Takova, T.6
Kwiatkowski, R.W.7
Sander, T.J.8
de Arruda, M.9
Arco, D.A.10
-
20
-
-
0033028685
-
Comparison of the 5′ nuclease activities of Taq DNA polymerase and its isolated nuclease domain
-
Lyamichev,V., Brow,M.A., Varvel,V.E. and Dahlberg,J.E. (1999) Comparison of the 5′ nuclease activities of Taq DNA polymerase and its isolated nuclease domain. Proc. Natl Acad. Sci. USA, 96, 6143-6148.
-
(1999)
Proc. Natl Acad. Sci. USA
, vol.96
, pp. 6143-6148
-
-
Lyamichev, V.1
Brow, M.A.2
Varvel, V.E.3
Dahlberg, J.E.4
-
21
-
-
0033597786
-
A comparison of eubacterial and archaeal structure-specific 5′-exonucleases
-
Kaiser,M.W., Lyamicheva,N., Ma,W., Miller,C., Neri,B., Fors,L. and Lyamichev,V.I. (1999) A comparison of eubacterial and archaeal structure-specific 5′-exonucleases. J. Biol. Chem., 274, 21387-21394.
-
(1999)
J. Biol. Chem
, vol.274
, pp. 21387-21394
-
-
Kaiser, M.W.1
Lyamicheva, N.2
Ma, W.3
Miller, C.4
Neri, B.5
Fors, L.6
Lyamichev, V.I.7
-
22
-
-
0742321956
-
Structural basis for FEN-1 substrate specificity and PCNA-mediated activation in DNA replication and repair
-
Chapados,B.R., Hosfield,D.J., Han,S., Qiu,J., Yelent,B., Shen,B. and Tainer,J.A. (2004) Structural basis for FEN-1 substrate specificity and PCNA-mediated activation in DNA replication and repair. Cell, 116, 39-50.
-
(2004)
Cell
, vol.116
, pp. 39-50
-
-
Chapados, B.R.1
Hosfield, D.J.2
Han, S.3
Qiu, J.4
Yelent, B.5
Shen, B.6
Tainer, J.A.7
-
23
-
-
0020807940
-
Methyl-directed repair of DNA base-pair mismatches in vitro
-
Lu,A.L., Clark,S. and Modrich,P. (1983) Methyl-directed repair of DNA base-pair mismatches in vitro. Proc. Natl Acad. Sci. USA, 80 4639-4643.
-
(1983)
Proc. Natl Acad. Sci. USA
, vol.80
, pp. 4639-4643
-
-
Lu, A.L.1
Clark, S.2
Modrich, P.3
-
24
-
-
0023046807
-
Hydrolysis by restriction endonucleases at their DNA recognition sequences substituted with mismatched base pairs
-
Shenoy,S., Daigle,K., Ehrlich,K.C., Gehrke,C.W. and Ehrlich,M. (1986) Hydrolysis by restriction endonucleases at their DNA recognition sequences substituted with mismatched base pairs. Nucleic Acids Res. 14, 4407-4420.
-
(1986)
Nucleic Acids Res
, vol.14
, pp. 4407-4420
-
-
Shenoy, S.1
Daigle, K.2
Ehrlich, K.C.3
Gehrke, C.W.4
Ehrlich, M.5
-
25
-
-
0034734377
-
Abasic site recognition by two apurinic/apyrimidinic endonuclease families in DNA base excision repair: The 30 ends justify the means
-
Mol,C.D., Hosfield,D.J. and Tainer,J.A. (2000) Abasic site recognition by two apurinic/apyrimidinic endonuclease families in DNA base excision repair: The 30 ends justify the means. Mutat. Res., 460, 211-229.
-
(2000)
Mutat. Res
, vol.460
, pp. 211-229
-
-
Mol, C.D.1
Hosfield, D.J.2
Tainer, J.A.3
-
26
-
-
0026094872
-
The vsr gene product of E. coli K-12 is a strand- and sequence-specific DNA mismatch endonuclease
-
Hennecke,F., Kolmar,H., Brundl,K. and Fritz,H.J. (1991) The vsr gene product of E. coli K-12 is a strand- and sequence-specific DNA mismatch endonuclease. Nature, 353, 776-778.
-
(1991)
Nature
, vol.353
, pp. 776-778
-
-
Hennecke, F.1
Kolmar, H.2
Brundl, K.3
Fritz, H.J.4
-
27
-
-
0029052949
-
A eukaryotic gene encoding an endonuclease that specifically repairs DNA damaged by ultraviolet light
-
Yajima,H., Takao,M., Yasuhira,S., Zhao,J.H., Ishii,C., Inoue,H. and Yasui,A. (1995) A eukaryotic gene encoding an endonuclease that specifically repairs DNA damaged by ultraviolet light. EMBO J., 14, 2393-2399.
-
(1995)
EMBO J
, vol.14
, pp. 2393-2399
-
-
Yajima, H.1
Takao, M.2
Yasuhira, S.3
Zhao, J.H.4
Ishii, C.5
Inoue, H.6
Yasui, A.7
-
28
-
-
0029989496
-
Characterization of a UV endonuclease gene from the fission yeast Schizosaccharomyces pombe and its bacterial homolog
-
Takao,M., Yonemasu,R., Yamamoto,K. and Yasui,A. (1996) Characterization of a UV endonuclease gene from the fission yeast Schizosaccharomyces pombe and its bacterial homolog. Nucleic Acids Res., 24, 1267-1271.
-
(1996)
Nucleic Acids Res
, vol.24
, pp. 1267-1271
-
-
Takao, M.1
Yonemasu, R.2
Yamamoto, K.3
Yasui, A.4
-
29
-
-
0030474259
-
An unusual mechanism for the major human apurinic/apyrimidinic (AP) endonuclease involving 5′ cleavage of DNA containing a benzene-derived exocyclic adduct in the absence of an AP site
-
Hang,B., Chenna,A., Fraenkel-Conrat,H. and Singer,B. (1996) An unusual mechanism for the major human apurinic/apyrimidinic (AP) endonuclease involving 5′ cleavage of DNA containing a benzene-derived exocyclic adduct in the absence of an AP site. Proc. Natl Acad. Sci. USA, 93, 13737-13741.
-
(1996)
Proc. Natl Acad. Sci. USA
, vol.93
, pp. 13737-13741
-
-
Hang, B.1
Chenna, A.2
Fraenkel-Conrat, H.3
Singer, B.4
-
30
-
-
0031682250
-
Differential cleavage of oligonucleotides containing the benzene-derived adduct, 1,N6-benzetheno-dA, by the major human AP endonuclease HAP1 and Escherichia coli exonuclease III and endonuclease IV
-
Hang,B., Chenna,A., Sagi,J. and Singer,B. (1998) Differential cleavage of oligonucleotides containing the benzene-derived adduct, 1,N6-benzetheno-dA, by the major human AP endonuclease HAP1 and Escherichia coli exonuclease III and endonuclease IV. Carcinogenesis, 19, 1339-1343.
-
(1998)
Carcinogenesis
, vol.19
, pp. 1339-1343
-
-
Hang, B.1
Chenna, A.2
Sagi, J.3
Singer, B.4
-
31
-
-
0028854033
-
Substrate preferences of Vsr DNA mismatch endonuclease and their consequences for the evolution of the Escherichia coli K-12 genome
-
Gläsner,W., Merkl,R., Schellenberger,V. and Fritz,H.J. (1995) Substrate preferences of Vsr DNA mismatch endonuclease and their consequences for the evolution of the Escherichia coli K-12 genome. J. Mol. Biol., 245, 1-7.
-
(1995)
J. Mol. Biol
, vol.245
, pp. 1-7
-
-
Gläsner, W.1
Merkl, R.2
Schellenberger, V.3
Fritz, H.J.4
-
32
-
-
4944254822
-
Complete genome sequence of the genetically tractable hydrogenotrophic methanogen Methanococcus maripaludis
-
Hendrickson,E.L., Kaul,R., Zhou,Y., Bovee,D., Chapman,P., Chung,J., Conway de Macario,E., Dodsworth,J.A., Gillett,W., Graham,D.E. et al. (2004) Complete genome sequence of the genetically tractable hydrogenotrophic methanogen Methanococcus maripaludis. J. Bacteriol. 186, 6956-6969.
-
(2004)
J. Bacteriol
, vol.186
, pp. 6956-6969
-
-
Hendrickson, E.L.1
Kaul, R.2
Zhou, Y.3
Bovee, D.4
Chapman, P.5
Chung, J.6
Conway de Macario, E.7
Dodsworth, J.A.8
Gillett, W.9
Graham, D.E.10
-
33
-
-
65549108408
-
Ein neu entdeckter Weg der Reparatur hydrolytisch geschädigter DNA-Cytosinreste, etabliert im thermophilen Archaeon
-
University of Göttingen, Doctoral thesis
-
Schomacher,L. (2007) Ein neu entdeckter Weg der Reparatur hydrolytisch geschädigter DNA-Cytosinreste, etabliert im thermophilen Archaeon Methanothermobacter thermautotrophicus H. University of Göttingen, Doctoral thesis.
-
(2007)
Methanothermobacter thermautotrophicus H
-
-
Schomacher, L.1
-
34
-
-
0037007150
-
The complete genome of hyperthermophile Methanopyrus kandleri AV19 and monophyly of archaeal methanogens
-
Slesarev,A.I., Mezhevaya,K.V., Makarova,K.S., Polushin,N.N., Shcherbinina,O.V., Shakhova,V.V., Belova,G.I., Aravind,L., Natale,D.A., Rogozin,I.B. et al. (2002) The complete genome of hyperthermophile Methanopyrus kandleri AV19 and monophyly of archaeal methanogens. Proc. Natl Acad. Sci. USA, 99, 4644-4649.
-
(2002)
Proc. Natl Acad. Sci. USA
, vol.99
, pp. 4644-4649
-
-
Slesarev, A.I.1
Mezhevaya, K.V.2
Makarova, K.S.3
Polushin, N.N.4
Shcherbinina, O.V.5
Shakhova, V.V.6
Belova, G.I.7
Aravind, L.8
Natale, D.A.9
Rogozin, I.B.10
-
35
-
-
30744456055
-
The genome sequence of Methanosphaera stadtmanae reveals why this human intestinal archaeon is restricted to methanol and H2 for methane formation and ATP synthesis
-
Fricke,W.F., Seedorf,H., Henne,A., Kruer,M., Liesegang,H., Hedderich,R., Gottschalk,G. and Thauer,R.K. (2006) The genome sequence of Methanosphaera stadtmanae reveals why this human intestinal archaeon is restricted to methanol and H2 for methane formation and ATP synthesis. J. Bacteriol., 188, 642-658.
-
(2006)
J. Bacteriol
, vol.188
, pp. 642-658
-
-
Fricke, W.F.1
Seedorf, H.2
Henne, A.3
Kruer, M.4
Liesegang, H.5
Hedderich, R.6
Gottschalk, G.7
Thauer, R.K.8
-
36
-
-
0031922356
-
A novel DNA polymerase family found in Archaea
-
Ishino,Y., Komori,K., Cann,I.K. and Koga,Y. (1998) A novel DNA polymerase family found in Archaea. J. Bacteriol., 180, 2232-2236.
-
(1998)
J. Bacteriol
, vol.180
, pp. 2232-2236
-
-
Ishino, Y.1
Komori, K.2
Cann, I.K.3
Koga, Y.4
-
37
-
-
0022549897
-
Purification and characterization of DNA polymerase from the archaebacterium Methanobacterium thermoautotrophicum
-
Klimczak,L.J., Grummt,F. and Burger,K.J. (1986) Purification and characterization of DNA polymerase from the archaebacterium Methanobacterium thermoautotrophicum. Biochemistry, 25, 4850-4855.
-
(1986)
Biochemistry
, vol.25
, pp. 4850-4855
-
-
Klimczak, L.J.1
Grummt, F.2
Burger, K.J.3
|