Identification of adjacent binding sites for the YY1 and E4BP4 transcription factors in the ovine PrP (Prion) gene promoter

Journal of Biological Chemistry

Volumn 284, Issue 11, 2009, Pages 6716-6724

  Burgess, Stewart T G ^a,d   Shen, Cuicui ^a,b   Ferguson, Laura A ^c   O'Neill, Gerard T ^a   Docherty, Kevin ^c   Hunter, Nora ^a   Goldmann, Wilfred ^a  

^a UNIVERSITY OF EDINBURGH   (United Kingdom)

^b CHINA AGRICULTURAL UNIVERSITY   (China)

^c UNIVERSITY OF ABERDEEN   (United Kingdom)

^d MOREDUN RESEARCH INSTITUTE   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

DIFFERENTIAL BINDING; DNA PROBE; ELECTROPHORETIC MOBILITY SHIFT ASSAY; FUNCTIONAL PROMOTER ANALYSIS; GENE ENCODES; GENE PROMOTER; HAPLOTYPE; INHIBITORY ACTIVITY; ISOFORM; KNOCK OUTS; MOTIF SEQUENCE; NUCLEAR FACTORS; NUCLEAR PROTEINS; POLYMORPHIC VARIANT; PRION PROTEIN; SEQUENCE MOTIFS; SPECIFIC BINDING; TRANSMISSIBLE SPONGIFORM ENCEPHALOPATHIES;

BINDING ENERGY; BINDING SITES; DNA; DNA SEQUENCES; ELECTROPHORETIC MOBILITY; GENES; MAMMALS; NUCLEIC ACIDS; TRANSCRIPTION FACTORS;

TRANSCRIPTION;

DNA; NUCLEAR PROTEIN; PRION PROTEIN; PROTEIN E4BP4; TRANSCRIPTION FACTOR; TRANSCRIPTION FACTOR YY1; UNCLASSIFIED DRUG; BASIC LEUCINE ZIPPER TRANSCRIPTION FACTOR; NFIL3 PROTEIN, HUMAN; NFIL3 PROTEIN, MOUSE; YY1 PROTEIN, HUMAN; YY1 PROTEIN, MOUSE;

ANIMAL CELL; ANIMAL TISSUE; ARTICLE; BINDING SITE; CATTLE; CONTROLLED STUDY; DNA PROBE; GEL MOBILITY SHIFT ASSAY; GENETIC VARIABILITY; GENOTYPE; HAPLOTYPE; MOUSE; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN ANALYSIS; PROTEIN BINDING; PROTEIN EXPRESSION; PROTEIN LOCALIZATION; PROTEIN MOTIF; TRANSCRIPTION REGULATION; ANIMAL; BIOSYNTHESIS; DNA RESPONSIVE ELEMENT; GENETICS; HELA CELL; HUMAN; METABOLISM; PHYSIOLOGY; PRION DISEASE; SHEEP;

MAMMALIA; MURINAE; MUS; OVIS;

ANIMALS; BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTORS; HELA CELLS; HUMANS; MICE; PRION DISEASES; PRPC PROTEINS; RESPONSE ELEMENTS; SHEEP; YY1 TRANSCRIPTION FACTOR;

EID: 65449125058     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M807065200     Document Type: Article

References (45)

1. Weissmann, C., Aguzzi, A., Dormont, D., and Hunter, N. (2003) in British Medical Bulletin Series of Expert Reviews, pp. 321, Oxford University Press, Oxford
2. Prusiner, S. B. (1982) Science 216, 136-144
3. Manson, J. C., Clarke, A. R., Hooper, M. L., Aitchison, L., McConnell, I., and Hope, J. (1994) Mol. Neurobiol. 8, 121-127
4. Manson, J. C., Clarke, A. R., McBride, P. A., McConnell, I., and Hope, J. (1994b) Neurodegeneration 3, 331-340
5. Johnson, R. T. (2005) Lancet Neurol. 10, 635-642
6. Hu, W., Rosenberg, R. N., and Stüve, O. (2007) Acta Neurol. Scand. 116, 75-82
7. Zomosa-Signoret, V., Arnaud, J. D., Fontes, P., Alvarez-Martinez, M. T., and Liautard, J. P. (2008) Vet. Res. 39, 9
8. Schneider, K., Korkmaz, Y., Addicks, K., Lang, H., and Raab, W. H. (2007) J. Endod. 33, 110-113
9. Saeki, K., Matsumoto, Y., Matsumoto, Y., and Onodera, T. (1996) Biochem. Biophys. Res. Commun. 219, 47-52
10. Inoue, S., Tanaka, M., Horiuchi, M., Ishiguro, N., and Shinagawa, M. (1997) J. Vet. Med. Sci. 59, 175-183
11. Haigh, C. L., Wright, J. A., and Brown, D. R. (2007) J. Mol. Biol. 368, 915-927
12. Premzl, M., and Gamulin, V. (2007) BMC Genomics 8, 1
13. Sander, P., Hamann, H., Drögemüller, C., Kashkevich, K., Schiebel, K., and Leeb, T. (2005) J. Biol. Chem. 280, 37408-37414
14. Westaway, D., Cooper, C., Turner, S., Dacosta, M., Carlson, G. A., and Prusiner, S. B. (1994) Proc. Natl. Acad. Sci. U. S. A. 91, 6418-6422
15. O'Neill, G. T., Donnelly, K., Marshall, E., Cairns, D., Goldmann, W., and Hunter, N. (2003) J. Anim. Breed Genet. 120, 114-123
16. O'Neill Cairns, D., Goldmann, W., Toovey, L., and Hunter, N. (2005) J. Anim. Breed. Genet. 122, 86-94
17. John, H. A. (1994) Hum. Gene Ther. 5, 283-293
18. Freshney, R. I. (1987) Culture of Animal Cells; A Manual of Basic Technique, 2nd Ed., Wiley-Liss, Inc., New York
19. Wingender, E., Chen, X., Hehl, R., Karas, H., Liebich, I., Matys, V., Meinhardt, T., Pruss, M., Reuter, I., and Schacherer, F. (2000) Nucleic Acids Res. 28, 316-319
20. Shi, Y., Lee, J. S., and Galvin, K. M. (1997) Biochim. Biophys. Acta 1332, 49-66
21. Johansson, E., Hjortsberg, K., and Thelander, L. (1998) J. Biol. Chem. 273, 29816-29821
22. Dyer, K. D., and Rosenberg, H. F. (2001) Life Sci. 69, 201-212
23. Cowell, I. G. (2002) BioEssays 24, 1023-1029
24. Hyde-DeRuyscher, R. P., Jennings, E., and Shenk, T. (1995) Nucleic Acids Res. 23, 4457-4465
25. Yant, S. R., Zhu, W., Millinoff, D., Slightom, J. L., Goodman, M., and Gumucio, D. L. (1995) Nucleic Acids Res. 23, 4353-4362
26. Romey, M. C., Pallares-Ruiz, N., Mange, A., Mettling, C., Peytavi, R., Demaille, J., and Claustres, M. (2000) J. Biol. Chem. 275, 3561-3567
27. Seto, E., Lewis, B., and Shenk, T. (1993) Nature 365, 462-464
28. Ericsson, J., Usheva, A., and Edwards, P. A. (1999) J. Biol. Chem. 274, 14508-14513
29. Spencer, V. A., Sun, J. M., Li, L., and Davie, J. R. (2003) Methods 31, 67-75
30. Ikushima, S., Inukai, T., Inaba, T., Nimer, S. D., Cleveland, J. L., and Look, A. T. (1997) Proc. Natl. Acad. Sci. U. S. A. 94, 2609-2614
31. McKnight, S. L. (1991) Sci. Am. 264, 54-64
32. Mitsui, S., Yamaguchi, S., Matsuo, T., Ishida, Y., and Okamura, H. (2001) Genes Dev. 15, 995-1006
33. Tobler, I., Gaus, S. E., Deboer, T., Achermann, P., Fischer, M., Rulicke, T., Moser, M., Oesch, B., McBride, P. A., and Manson, J. C. (1996) Nature 380, 639-642
34. Gambetti, P., Petersen, R., Monari, L., Tabaton, M., Autiliogambetti, L., Cortelli, P., Montagna, P., and Lugaresi, E. (1993) Br. Med. Bull. 49, 980-994
35. Cagampang, F. R. A., Whatley, S. A., Mitchell, A. L., Powell, J. F., Campbell, I. C., and Coen, C. W. (1999) Neurosci. 91, 1201-1204
36. Nishimura, Y., and Tanaka, T. (2001) J. Biol. Chem. 276, 19921-19928
37. Yu, Y. L., Chiang, Y. J., and Yen, J. J. (2002) J. Biol. Chem. 277, 27144-27153
38. Jamieson, E., Jeffrey, M., Ironside, J. W., and Fraser, J. R. (2001) Neuroreport 12, 3567-3572
39. Kretzschmar, H. A., Giese, A., Brown, D. R., Herms, J., Keller, B., Schmidt, B., and Groschup, M. (1997) J. Neural Transm. Suppl. 50, 191-210
40. Dupre, S. M., Burt, D. W., Talbot, R., Downing A., Mouzaki, D., Waddington, D., Malpaux, B., Davis, J. R. E., Lincoln, G. A., and Loudon, A. S. I. (2008) Endocrinology 149, 5527-5539
41. Parkin, E. T., Watt, N. T., Hussain, I., Eckman, E. A., Eckman, C. B., Manson, J. C., Baybutt, H. N., Turner, A. J., and Hooper, N. M. (2007) Proc. Natl. Acad. Sci. U. S. A. 104, 11062-11067
42. Baier, M., Apelt, J., Riemer, C., Gültner, S., Schwarz, A., Bamme, T., Burwinkel, M., and Schliebs, R. (2008) Int. J. Dev. Neurosci. 26, 821-824
43. Novak, K., Lange-Dohna, C., Zeitschel, U., Gunther, A., Luscher, B., Robitzki, A., Preez-Polo, R., and Rossner, S. (2006) J. Neurochem. 96, 1696-1707
44. Zambrano, N., De Renzis, S., Minopoli, G., Faraonio, R., Donini, V., Scaloni, A., Cimino, F., and Russo, T. (1997) Biochem. J. 328, 293-300
45. Montagna, P. (2005) Sleep Med. Rev. 5, 339-353