Topological methods for exploring low-density states in biomolecular folding pathways

Journal of Chemical Physics

Volumn 130, Issue 14, 2009, Pages

  Yao, Yuan ^a   Sun, Jian ^b   Huang, Xuhui ^b   Bowman, Gregory R ^a   Singh, Gurjeet ^a   Lesnick, Michael ^a   Guibas, Leonidas J ^b   Pande, Vijay S ^a   Carlsson, Gunnar ^a  

^a STANFORD UNIVERSITY   (United States)

^b Stanford University   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIO-MOLECULAR; CLUSTERING ANALYSIS; COMPUTATIONAL APPROACHES; CONDITIONAL DENSITIES; DENSITY STATE; DISTANCE METRIC; DISTRIBUTED COMPUTING; EMBEDDING METHODS; FOLDING PATHWAYS; FOLDING SYSTEMS; FUNCTIONAL LEVELS; HIGH-DIMENSIONAL; INTERMEDIATE STATE; LEVEL SETS; MORSE THEORIES; MULTIPLE PATHWAYS; NON-LINEAR DIMENSIONALITY REDUCTIONS; REFOLDING PATHWAYS; SIMPLE SYSTEMS; SIMULATION DATUM; STRUCTURAL EVIDENCES; STRUCTURAL FEATURES; TOPOLOGICAL DATA ANALYSIS; TOPOLOGICAL METHODS; TRANSIENT INTERMEDIATES; TRANSIENT STATE; TRANSITION STATE;

COMPUTER SIMULATION; LEVEL MEASUREMENT; NUCLEIC ACIDS; RNA;

COMPUTATIONAL METHODS;

RNA;

ARTICLE; CHEMICAL STRUCTURE; CHEMISTRY; COMPUTER SIMULATION; CONFORMATION; KINETICS; METABOLISM;

COMPUTER SIMULATION; KINETICS; MODELS, MOLECULAR; NUCLEIC ACID CONFORMATION; RNA;

EID: 65249153026     PISSN: 00219606     EISSN: None     Source Type: Journal    
DOI: 10.1063/1.3103496     Document Type: Article

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