메뉴 건너뛰기




Volumn 10, Issue 8, 2008, Pages 2087-2097

Microbial community analysis of two field-scale sulfate-reducing bioreactors treating mine drainage

Author keywords

[No Author keywords available]

Indexed keywords

RNA 16S; SULFATE;

EID: 64749114257     PISSN: 14622912     EISSN: 14622920     Source Type: Journal    
DOI: 10.1111/j.1462-2920.2008.01630.x     Document Type: Article
Times cited : (52)

References (46)
  • 1
    • 33749341500 scopus 로고    scopus 로고
    • Whole-genome transcrip-tional analysis of chemolithoautotrophic thiosulfate oxidation by Thiobacillus denitrificans under aerobic versus denitrifying conditions
    • Beller, H.R., Letain, T.E., Chakicherla, A., Kane, S.R., Legler, T.C., and Coleman, M.A. (2006) Whole-genome transcrip-tional analysis of chemolithoautotrophic thiosulfate oxidation by Thiobacillus denitrificans under aerobic versus denitrifying conditions. J Bacteriol 188: 7005-7015.
    • (2006) J Bacteriol , vol.188 , pp. 7005-7015
    • Beller, H.R.1    Letain, T.E.2    Chakicherla, A.3    Kane, S.R.4    Legler, T.C.5    Coleman, M.A.6
  • 2
  • 3
    • 0033823610 scopus 로고    scopus 로고
    • Micro-bial populations associated with the generation and treatment of acid mine drainage
    • Benner, S.G., Gould, W.D., and Blowes, D.W. (2000) Micro-bial populations associated with the generation and treatment of acid mine drainage. Chem Geol 169: 435-448.
    • (2000) Chem Geol , vol.169 , pp. 435-448
    • Benner, S.G.1    Gould, W.D.2    Blowes, D.W.3
  • 4
    • 85029293710 scopus 로고    scopus 로고
    • Passive treatment alternatives for remediating abandoned-mine drainage
    • Berghorn, G.H., and Hunzeker, G.R. (2001) Passive treatment alternatives for remediating abandoned-mine drainage. Remediation Journal 11: 111-127.
    • (2001) Remediation Journal , vol.11 , pp. 111-127
    • Berghorn, G.H.1    Hunzeker, G.R.2
  • 5
    • 2942691762 scopus 로고    scopus 로고
    • Tannery effluent as a carbon source for biological sulphate reduction
    • Boshoff, G., Duncan, J., and Rose, P.D. (2004) Tannery effluent as a carbon source for biological sulphate reduction. Water Res 38: 2651-2658.
    • (2004) Water Res , vol.38 , pp. 2651-2658
    • Boshoff, G.1    Duncan, J.2    Rose, P.D.3
  • 6
    • 33644862878 scopus 로고    scopus 로고
    • Diversity of microorganisms in Fe-As-Rich acid mine drainage waters of Carnoules, France
    • Bruneel, O., Duran, R., Casiot, C., Elbaz-Poulichet, F., and Personne, J.C. (2006) Diversity of microorganisms in Fe-As-Rich acid mine drainage waters of Carnoules, France. Appl Environ Microbiol 72: 551-556.
    • (2006) Appl Environ Microbiol , vol.72 , pp. 551-556
    • Bruneel, O.1    Duran, R.2    Casiot, C.3    Elbaz-Poulichet, F.4    Personne, J.C.5
  • 7
    • 33746084042 scopus 로고    scopus 로고
    • Suspension array analysis of 16S rRNA from fe-and SO42-reducing bacteria in uranium-contaminated sediments undergoing biore-mediation
    • Chandler, D.P., Jarrell, A.E., Roden, E.R., Golova, J., Chernov, B., Schipma, M.J., et al. (2006) Suspension array analysis of 16S rRNA from fe-and SO42-reducing bacteria in uranium-contaminated sediments undergoing biore-mediation. Appl Environ Microbiol 72: 4672-4687.
    • (2006) Appl Environ Microbiol , vol.72 , pp. 4672-4687
    • Chandler, D.P.1    Jarrell, A.E.2    Roden, E.R.3    Golova, J.4    Chernov, B.5    Schipma, M.J.6
  • 8
    • 11944252111 scopus 로고    scopus 로고
    • Molecular microbial ecology of lignocellulose mobilisation as a carbon source in mine drainage wastewater treatment
    • Clarke, A.M., Kirby, R., and Rose, P.D. (2004) Molecular microbial ecology of lignocellulose mobilisation as a carbon source in mine drainage wastewater treatment. Water SA 30: 658-661.
    • (2004) Water SA , vol.30 , pp. 658-661
    • Clarke, A.M.1    Kirby, R.2    Rose, P.D.3
  • 10
    • 0033909552 scopus 로고    scopus 로고
    • Development of oligonucleotide probes and PCR primers for detecting phylogenetic subgroups of sulfatereducing bacteria
    • Daly, K., Sharp, R.J., and McCarthy, A.J. (2000) Development of oligonucleotide probes and PCR primers for detecting phylogenetic subgroups of sulfatereducing bacteria. Microbiology 146: 1693-1705.
    • (2000) Microbiology , vol.146 , pp. 1693-1705
    • Daly, K.1    Sharp, R.J.2    McCarthy, A.J.3
  • 12
    • 64749093461 scopus 로고    scopus 로고
    • EPA (1997) EPA's National Hardrock Mining Framework:United States Environmental Protection Agency Office of Water (4203). Washington, DC, USA:U.S. Environmental Protection Agency Office of Water (4203).
    • EPA (1997) EPA's National Hardrock Mining Framework:United States Environmental Protection Agency Office of Water (4203). Washington, DC, USA:U.S. Environmental Protection Agency Office of Water (4203).
  • 13
    • 0036136241 scopus 로고    scopus 로고
    • Phylogenetic analysis reveals multiple lateral transfers of adenosine-5́-phosphosulfate reductase genes among sulfate-reducing microorganisms
    • Friedrich, M.W. (2002) Phylogenetic analysis reveals multiple lateral transfers of adenosine-5́-phosphosulfate reductase genes among sulfate-reducing microorganisms. J Bacteriol 184: 278-289.
    • (2002) J Bacteriol , vol.184 , pp. 278-289
    • Friedrich, M.W.1
  • 15
    • 12944298784 scopus 로고    scopus 로고
    • Microbiology of a wetland ecosystem constructed to remediate mine drainage from a heavy-metal mine
    • Hallberg, K.B., and Johnson, D.B. (2005a) Microbiology of a wetland ecosystem constructed to remediate mine drainage from a heavy-metal mine. Sci Total Environ 338: 53-66.
    • (2005) Sci Total Environ , vol.338 , pp. 53-66
    • Hallberg, K.B.1    Johnson, D.B.2
  • 16
    • 64749104663 scopus 로고    scopus 로고
    • Hallberg, K.B., and Johnson, D.B. (2005b) Microbial populations of compost wetlands constructed to remediate acidic coal spoil drainage. In 16th International Biohydrometallurgy Symposium (IBS). Harrison, S.T.L., Rawlings, D.E., and Peteren, J. (eds). Cape Town, South Africa:International Biohydrometallurgy Symposium, pp. 713-722.
    • Hallberg, K.B., and Johnson, D.B. (2005b) Microbial populations of compost wetlands constructed to remediate acidic coal spoil drainage. In 16th International Biohydrometallurgy Symposium (IBS). Harrison, S.T.L., Rawlings, D.E., and Peteren, J. (eds). Cape Town, South Africa:International Biohydrometallurgy Symposium, pp. 713-722.
  • 17
    • 0030898579 scopus 로고    scopus 로고
    • Bioremedia-tion of acid mine water using facultatively methylotrophic metal-tolerant sulfate-reducing bacteria
    • Hard, B.C., Friedrich, S., and Babel, W. (1997) Bioremedia-tion of acid mine water using facultatively methylotrophic metal-tolerant sulfate-reducing bacteria. Microbiol Res 152: 65-73.
    • (1997) Microbiol Res , vol.152 , pp. 65-73
    • Hard, B.C.1    Friedrich, S.2    Babel, W.3
  • 18
    • 64749109834 scopus 로고    scopus 로고
    • Holt, J.H. (ed.). (1984) Bergey's Manual of Systematic Bacteriology. Baltimore, MD, USA:Williams & Wilkins. Hugenholtz, P. (2002) Exploring prokaryotic diversity in the genomic era. Genome Biol 3: reviews0003.1-reviews0003.8.
    • Holt, J.H. (ed.). (1984) Bergey's Manual of Systematic Bacteriology. Baltimore, MD, USA:Williams & Wilkins. Hugenholtz, P. (2002) Exploring prokaryotic diversity in the genomic era. Genome Biol 3: reviews0003.1-reviews0003.8.
  • 19
    • 0141741231 scopus 로고    scopus 로고
    • The microbiology of acidic mine waters
    • Johnson, D.B., and Hallberg, K.B. (2003) The microbiology of acidic mine waters. Res Microbiol 154: 466-473.
    • (2003) Res Microbiol , vol.154 , pp. 466-473
    • Johnson, D.B.1    Hallberg, K.B.2
  • 20
    • 12944323182 scopus 로고    scopus 로고
    • Acid mine drainage remediation options:a review
    • Johnson, D.B., and Hallberg, K.B. (2005a) Acid mine drainage remediation options:a review. Sci Total Environ 338: 3-14.
    • (2005) Sci Total Environ , vol.338 , pp. 3-14
    • Johnson, D.B.1    Hallberg, K.B.2
  • 21
    • 12944303646 scopus 로고    scopus 로고
    • Biogeochemistry of the compost bioreactor components of a composite acid mine drainage passive remediation system
    • Johnson, D.B., and Hallberg, K.B. (2005b) Biogeochemistry of the compost bioreactor components of a composite acid mine drainage passive remediation system. Sci Total Environ 338: 81-93.
    • (2005) Sci Total Environ , vol.338 , pp. 81-93
    • Johnson, D.B.1    Hallberg, K.B.2
  • 22
    • 1542301480 scopus 로고    scopus 로고
    • Simple organic electron donors support diverse sulfate-reducing communities in fluidized-bed reactors treating acidic metal-and sulfate-containing waste water
    • Kaksonen, A.H., Plumb, J.J., Franzmann, P.D., and Puhakka, J.A. (2004) Simple organic electron donors support diverse sulfate-reducing communities in fluidized-bed reactors treating acidic metal-and sulfate-containing waste water. FEMS Microbiol Ecol 47: 279-289.
    • (2004) FEMS Microbiol Ecol , vol.47 , pp. 279-289
    • Kaksonen, A.H.1    Plumb, J.J.2    Franzmann, P.D.3    Puhakka, J.A.4
  • 23
    • 33749536194 scopus 로고    scopus 로고
    • Microbial studies of a selenium-contaminated mine site and potential for on-site remediation
    • Knotek-Smith, H.M., Crawford, D.L., Moller, G., and Henson, R.A. (2006) Microbial studies of a selenium-contaminated mine site and potential for on-site remediation. J Ind Microbiol Biotechnol 33: 897-913.
    • (2006) J Ind Microbiol Biotechnol , vol.33 , pp. 897-913
    • Knotek-Smith, H.M.1    Crawford, D.L.2    Moller, G.3    Henson, R.A.4
  • 24
    • 3042704580 scopus 로고    scopus 로고
    • Sulfate-reducing bacteria-dominated biofilms that precipitate ZnS in a subsurface circumneutral-pH mine drainage system
    • Labrenz, M., and Banfield, J.F. (2004) Sulfate-reducing bacteria-dominated biofilms that precipitate ZnS in a subsurface circumneutral-pH mine drainage system. Microb Ecol 47: 205-217.
    • (2004) Microb Ecol , vol.47 , pp. 205-217
    • Labrenz, M.1    Banfield, J.F.2
  • 25
    • 27544516368 scopus 로고    scopus 로고
    • Microbial community activities during establishment, performance, and decline of bench-scale passive treatment systems for mine drainage
    • Logan, M.V., Reardon, K.F., Figueroa, L., McLain, J.E.T., and Ahmann, D. (2005) Microbial community activities during establishment, performance, and decline of bench-scale passive treatment systems for mine drainage. Water Res 39: 4537-4551.
    • (2005) Water Res , vol.39 , pp. 4537-4551
    • Logan, M.V.1    Reardon, K.F.2    Figueroa, L.3    McLain, J.E.T.4    Ahmann, D.5
  • 26
    • 33947269742 scopus 로고    scopus 로고
    • Quantitative and qualitative beta diversity measures lead to different insights into factors that structure microbial communities
    • Lozupone, C.A., Hamady, M., Kelley, S.T., and Knight, R. (2007) Quantitative and qualitative beta diversity measures lead to different insights into factors that structure microbial communities. Appl Environ Microbiol 73: 1576-1585.
    • (2007) Appl Environ Microbiol , vol.73 , pp. 1576-1585
    • Lozupone, C.A.1    Hamady, M.2    Kelley, S.T.3    Knight, R.4
  • 27
    • 29144464937 scopus 로고    scopus 로고
    • UniFrac:a new phylogenetic method for comparing microbial communities
    • Lozupone, C., and Knight, R. (2005) UniFrac:a new phylogenetic method for comparing microbial communities. Appl Environ Microbiol 71: 8228-8235.
    • (2005) Appl Environ Microbiol , vol.71 , pp. 8228-8235
    • Lozupone, C.1    Knight, R.2
  • 29
    • 33748713890 scopus 로고    scopus 로고
    • UniFrac-an online tool for comparing microbial community diversity in a phylogenetic context
    • URL
    • Lozupone, C., Hamady, M., and Knight, R. (2006) UniFrac-an online tool for comparing microbial community diversity in a phylogenetic context. BMC Bioinformatics 7. URL http://www.biomedcentral.com/1471-2105/77371.
    • (2006) BMC Bioinformatics , vol.7
    • Lozupone, C.1    Hamady, M.2    Knight, R.3
  • 30
    • 0028378648 scopus 로고
    • The biological treatment of acid-mine drainage under continuous-flow conditions in a reactor
    • Lyew, D., Knowles, R., and Sheppard, J. (1994) The biological treatment of acid-mine drainage under continuous-flow conditions in a reactor. Process Saf Environ Protect 72: 42-47.
    • (1994) Process Saf Environ Protect , vol.72 , pp. 42-47
    • Lyew, D.1    Knowles, R.2    Sheppard, J.3
  • 31
    • 25444466886 scopus 로고    scopus 로고
    • Desulfovibrio aerotolerans sp nov., an oxygen tolerant sulphate-reducing bacterium isolated from activated sludge
    • Mogensen, G.L., Kjeldsen, K.U., and Ingvorsen, K. (2005) Desulfovibrio aerotolerans sp nov., an oxygen tolerant sulphate-reducing bacterium isolated from activated sludge. Anaerobe 11: 339-349.
    • (2005) Anaerobe , vol.11 , pp. 339-349
    • Mogensen, G.L.1    Kjeldsen, K.U.2    Ingvorsen, K.3
  • 32
    • 19544377672 scopus 로고    scopus 로고
    • Analysis of bacterial diversity in acidic pond water and compost after treatment of artificial acid mine drainage for metal removal
    • Morales, T.A., Dopson, M., Athar, R., and Herbert, R.B.J. (2005) Analysis of bacterial diversity in acidic pond water and compost after treatment of artificial acid mine drainage for metal removal. Biotechnol Bioeng 90: 543-551.
    • (2005) Biotechnol Bioeng , vol.90 , pp. 543-551
    • Morales, T.A.1    Dopson, M.2    Athar, R.3    Herbert, R.B.J.4
  • 33
    • 0027460328 scopus 로고
    • Profiling of complex microbial-populations by denaturing gradient gel-electrophoresis analysis of polymerase chain reaction-amplified genes-coding for 16s ribosomal-rna
    • Muyzer, G., Dewaal, E.C., and Uitterlinden, A.G. (1993) Profiling of complex microbial-populations by denaturing gradient gel-electrophoresis analysis of polymerase chain reaction-amplified genes-coding for 16s ribosomal-rna. Appl Environ Microbiol 59: 695-700.
    • (1993) Appl Environ Microbiol , vol.59 , pp. 695-700
    • Muyzer, G.1    Dewaal, E.C.2    Uitterlinden, A.G.3
  • 34
    • 33846207502 scopus 로고    scopus 로고
    • Passive treatment of acid mine drainage in bioreactors using sulfate-reducing bacteria
    • Neculita, C.M., Zagury, G.J., and Bussière, B. (2007) Passive treatment of acid mine drainage in bioreactors using sulfate-reducing bacteria. J Environ Qual 36: 1-16.
    • (2007) J Environ Qual , vol.36 , pp. 1-16
    • Neculita, C.M.1    Zagury, G.J.2    Bussière, B.3
  • 35
    • 33746388900 scopus 로고    scopus 로고
    • Microbial populations identified by fluorescence in situ hybridization in a constructed wetland treating acid coal mine drainage
    • Nicomrat, D., Dick, W.A., and Tuovinen, O.H. (2006a) Microbial populations identified by fluorescence in situ hybridization in a constructed wetland treating acid coal mine drainage. J Environ Qual 35: 1329-1337.
    • (2006) J Environ Qual , vol.35 , pp. 1329-1337
    • Nicomrat, D.1    Dick, W.A.2    Tuovinen, O.H.3
  • 36
    • 32244439191 scopus 로고    scopus 로고
    • Assessment of the microbial community in a constructed wetland that receives acid coal mine drainage
    • Nicomrat, D., Dick, W.A., and Tuovinen, O.H. (2006b) Assessment of the microbial community in a constructed wetland that receives acid coal mine drainage. Microb Ecol 51: 83-89.
    • (2006) Microb Ecol , vol.51 , pp. 83-89
    • Nicomrat, D.1    Dick, W.A.2    Tuovinen, O.H.3
  • 37
    • 64749110774 scopus 로고    scopus 로고
    • Characterizing and tracking reactive mixture alterations:new tools for passive treatment systems design and monitoring
    • Barnhisel, R.I, ed, St. Louis, MO, USA:American Society of Mining and Reclamation ASMR, pp
    • th International Conference on Acid Rock Drainage (ICARD). Barnhisel, R.I. (ed.). St. Louis, MO, USA:American Society of Mining and Reclamation (ASMR), pp. 1605-1619.
    • (2006) th International Conference on Acid Rock Drainage (ICARD) , pp. 1605-1619
    • Place, D.1    Figueroa, L.2    Wildeman, T.3    Reisman, D.4
  • 38
    • 33846355962 scopus 로고    scopus 로고
    • The effect of inoculum on the performance of sulfate-reducing columns treating heavy metal contaminated water
    • Pruden, A., Messner, N., Pereyra, L., Hanson, R.E., Hiibel, S.R., and Reardon, K.F. (2007) The effect of inoculum on the performance of sulfate-reducing columns treating heavy metal contaminated water. Water Res 41: 904-914.
    • (2007) Water Res , vol.41 , pp. 904-914
    • Pruden, A.1    Messner, N.2    Pereyra, L.3    Hanson, R.E.4    Hiibel, S.R.5    Reardon, K.F.6
  • 40
    • 35748932694 scopus 로고    scopus 로고
    • Use of multivariate statistics for 16S rRNA gene analysis of micro-bial communities
    • Rudi, K., Zimonja, M., Trosvik, P., and Naes, T. (2007) Use of multivariate statistics for 16S rRNA gene analysis of micro-bial communities. Int J Food Microbiol 120: 95-99.
    • (2007) Int J Food Microbiol , vol.120 , pp. 95-99
    • Rudi, K.1    Zimonja, M.2    Trosvik, P.3    Naes, T.4
  • 41
    • 0034269696 scopus 로고    scopus 로고
    • Development of a sulfate-reducing biological process to remove heavy metals from acid mine drainage
    • Steed, V.S., Suidan, M.T., Gupta, M., Miyahara, T., Acheson, C.M., and Sayles, G.D. (2000) Development of a sulfate-reducing biological process to remove heavy metals from acid mine drainage. Water Environ Res 72: 530-535.
    • (2000) Water Environ Res , vol.72 , pp. 530-535
    • Steed, V.S.1    Suidan, M.T.2    Gupta, M.3    Miyahara, T.4    Acheson, C.M.5    Sayles, G.D.6
  • 42
    • 0033760479 scopus 로고    scopus 로고
    • Quantitative analysis of small-subunit rRNA Genes in mixed microbial populations via 5'-nuclease assays
    • Suzuki, M.T., Taylor, L.T., and DeLong, E.F. (2000) Quantitative analysis of small-subunit rRNA Genes in mixed microbial populations via 5'-nuclease assays. Appl Environ Microbiol 66: 4605-4614.
    • (2000) Appl Environ Microbiol , vol.66 , pp. 4605-4614
    • Suzuki, M.T.1    Taylor, L.T.2    DeLong, E.F.3
  • 44
    • 0031574072 scopus 로고    scopus 로고
    • The ClustalX windows interface:flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson, J.D., Gibson, T.J., Plewniak, F., Jeanmougin, F., and Higgins, D.G. (1997) The ClustalX windows interface:flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25: 4876-4882.
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 45
    • 0037086066 scopus 로고    scopus 로고
    • Treatment of mine drainage using permeable reactive barriers:column experiments
    • Waybrant, K.R., Ptacek, C.J., and Blowes, D.W. (2002) Treatment of mine drainage using permeable reactive barriers:column experiments. Environ Sci Technol 36: 1349-1356.
    • (2002) Environ Sci Technol , vol.36 , pp. 1349-1356
    • Waybrant, K.R.1    Ptacek, C.J.2    Blowes, D.W.3
  • 46
    • 0026067797 scopus 로고
    • 16S ribosomal DNA amplification for phylogenetic study
    • Weisburg, W.G., Barns, S.M., Pelletier, D.A., and Lane, D.J. (1991) 16S ribosomal DNA amplification for phylogenetic study. J Bacteriol 173: 697-703.
    • (1991) J Bacteriol , vol.173 , pp. 697-703
    • Weisburg, W.G.1    Barns, S.M.2    Pelletier, D.A.3    Lane, D.J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.