Evolutionary Conserved Motif Finder (ECMFinder) for genome-wide identification of clustered YY1- and CTCF-binding sites

Nucleic Acids Research

Volumn 37, Issue 6, 2009, Pages 2003-2013

  Kang, Keunsoo ^a,b   Chung, Jae Hoon ^b   Kim, Joomyeong ^a  

^a LOUISIANA STATE UNIVERSITY   (United States)

^b Korea Advanced Institute of Science and Technology (KAIST)   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

CYCLIN DEPENDENT KINASE; CYCLIN DEPENDENT KINASE 1C; TRANSCRIPTION FACTOR; TRANSCRIPTION FACTOR CTCF; TRANSCRIPTION FACTOR DLK1; TRANSCRIPTION FACTOR MAGEL2; TRANSCRIPTION FACTOR YY1; UNCLASSIFIED DRUG; CCCTC BINDING FACTOR; CCCTC-BINDING FACTOR; DNA BINDING PROTEIN; REPRESSOR PROTEIN;

ANIMAL CELL; ARTICLE; BINDING SITE; BIOINFORMATICS; CHROMATIN IMMUNOPRECIPITATION; COMPUTER PROGRAM; CONTROLLED STUDY; COW; FEASIBILITY STUDY; GENE CLUSTER; GENE SEQUENCE; GENETIC ALGORITHM; GENOME ANALYSIS; GENOME IMPRINTING; HOMOLOGOUS RECOMBINATION; HUMAN; HUMAN CELL; IN VIVO STUDY; MOUSE; NONHUMAN; NUCLEIC ACID DATABASE; PRIORITY JOURNAL; PROTEIN DNA BINDING; PROTEIN MOTIF; SENSITIVITY ANALYSIS; SEQUENCE ALIGNMENT; ALGORITHM; ANIMAL; CATTLE; EVALUATION; GENOMICS; HUMAN GENOME; METABOLISM; METHODOLOGY; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; REGULATORY SEQUENCE;

MAMMALIA;

ALGORITHMS; ANIMALS; BASE SEQUENCE; BINDING SITES; CATTLE; CONSERVED SEQUENCE; DNA-BINDING PROTEINS; GENOME, HUMAN; GENOMICS; HUMANS; MICE; MOLECULAR SEQUENCE DATA; REGULATORY ELEMENTS, TRANSCRIPTIONAL; REPRESSOR PROTEINS; SOFTWARE; YY1 TRANSCRIPTION FACTOR;

EID: 64549141071     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkp077     Document Type: Article

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