Identification and mapping of Pi41, a major gene conferring resistance to rice blast in the Oryza sativa subsp. indica reference cultivar, 93-11

Theoretical and Applied Genetics

Volumn 118, Issue 6, 2009, Pages 1027-1034

  Yang, Qinzhong ^a,b   Lin, Fei ^a   Wang, Ling ^a   Pan, Qinghua ^a  

^a SOUTH CHINA AGRICULTURAL UNIVERSITY   (China)

^b INSTITUTE OF MEDICINAL PLANTS   (China)

Author keywords

[No Author keywords available]

Indexed keywords

BULK SEGREGANT ANALYSIS; CHROMOSOMAL LOCATIONS; GENE ISOLATIONS; MARKER-ASSISTED BREEDINGS; ORYZA SATIVA; PCR-BASED MARKERS; RICE BLAST FUNGUS; RICE BLASTS; SSR MARKERS; TARGET REGIONS;

CLONING; LINGUISTICS; SEMICONDUCTOR RELAYS;

BLAST RESISTANCE;

ARTICLE; CHROMOSOME MAP; GENETICS; GENOTYPE; IMMUNOLOGY; INNATE IMMUNITY; MAGNAPORTHE; MICROBIOLOGY; PATHOGENICITY; PLANT CHROMOSOME; PLANT DISEASE; PLANT GENE; RICE;

CHROMOSOME MAPPING; CHROMOSOMES, PLANT; GENES, PLANT; GENOTYPE; IMMUNITY, INNATE; MAGNAPORTHE; ORYZA SATIVA; PLANT DISEASES;

FUNGI; JAPONICA; MAGNAPORTHE GRISEA; ORYZA SATIVA (INDICA CULTIVAR-GROUP);

EID: 64249145519     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00122-008-0959-0     Document Type: Article

References (54)

1. SN Ahn YK Kim HC Hong SS Han SJ Kwon HC Choi HP Moon SR McCouch 2000 Molecular mapping of a new gene for resistance to rice blast (Pyricularia grisea Sacc.) Euphytica 116 17 22
2. Arabidopsis Genome initiative 2000 Analysis of the genome sequence of the flowering plant Arabidopsis thaliana Nature 408 796 815
3. GT Bryan KS Wu L Farrall YL Jia HP Hershey SA McAdams KN Faulk GK Donaldson R Tarchini B Valent 2000 A single amino acid difference distinguishes resistant and susceptible alleles of the rice blast resistance gene Pi-ta Plant Cell 12 2033 2045
4. RS Chauhan ML Farman HB Zhang SA Leong 2002 Genetic and physical mapping of a new blast resistance locus, Pi-CO39(t), that corresponds to the avirulence gene AVR1-CO39 of Magnaporthe grisea Mol Genet Genomics 267 603 612
5. M Chen G Presting WB Barbazuk 2002 An integrated physical and genetic map of the rice genome Plant Cell 14 537 545
6. S Chen L Wang ZQ Que RQ Pan QH Pan 2005 Genetic and physical mapping of Pi37(t), a new gene conferring resistance to rice blast in the famous cultivar St. No. 1 Theor Appl Genet 111 1563 1570
7. XW Chen JJ Shang DX Chen CL Lei Y Zou WX Zhai GZ Liu JC Xu ZZ Ling G Cao BT Ma YP Wang XF Zhao SG Li LH Zhu 2006 A B-lectin receptor kinase gene conferring rice blast resistance Plant J 46 794 804
8. ST Chisholm G Coaker B Day BJ Staskawicz 2006 Host-Microbe interactions: shaping the evolution of the plant immune response Cell 124 803 814
9. BC Couch LM Hohn 2002 A multilocus gene genealogy concordant with host preference indicates segregation of a new species, Magnaporthe oryzae, from M. grisea Mycologia 94 683 693
10. ZY Dai BH Zhao XJ Liu GH Xia CL Tan BQ Zhang HX Zhang 1997 A new middle-mature indica rice variety Yangdao 6 with high yielding, high quality and multiple disease resistance (in Chinese) Jiangsu Agric Sci 4 13 14
11. YW Deng XD Zhu Y Shen ZH He 2006 Genetic characterization and fine mapping of the blast resistance locus Pigm(t) tightly linked to Pi2 and Pi9 in a broad-spectrum resistant Chinese variety Theor Appl Genet 113 705 713
12. HK Dooner IM Martinez-Ferez 1997 Recombination occurs uniformly with the bronze gene, a meiotic recombination hotspot in the maize genome Plant Cell 9 1633 1646
13. JG Elli GJ Lawrence PN Dodds 2007 Further analysis of gene-for-gene disease resistance specificity in flax Mol Plant Pathol 8 103 109
14. M Gowda S Barman-Roy BB Chattoo 2006 Molecular mapping of a novel blast resistance gene Pi38 in rice using SSLP and AFLP markers Plant Breed 125 596 599
15. K Gu D Tian F Yang L Wu C Sreekala D Wang G Wang Z Yin 2004 High-resolution genetic mapping of Xa27(t), a new bacterial blight resistance gene in rice, Oryza sativa L Theor Appl Genet 108 800 807
16. N Hayashi I Ando T Imbe 1998 Identification of a new resistance gene to a Chinese blast fungus isolate in the Japanese rice cultivar Aichi Asahi Phytopathology 88 822 827
17. S Hittalmani A Parco TV Mew RS Zeigler N Huang 2000 Fine mapping and DNA marker-assisted pyramiding of the three major genes for blast resistance in rice Theor Appl Genet 100 1121 1128
18. International Rice Genome Sequencing Project 2005 The map-based sequence of the rice genome Nature 436 793 800
19. T Inukai A Sako H Hirano Y Sano 2000 Analysis of intragenic recombination at wx in rice: Correlation between the molecular and genetic maps with the locus Genome 43 589 596
20. YL Jia SA McAdams GT Bryan HP Hershey B Valent 2000 Direct interaction of resistance gene and avirulence gene products confers rice blast resistance EMBO J 19 4004 4014
21. B Liu SH Zhang XY Zhu QY Yang SZ Wu MT Mei R Mauleon J Leach T Mew H Leung 2004 Candidate defense genes as predictors of quantitative blast resistance in rice Mol Plant Microbe Interact 17 1146 1152
22. XQ Liu L Wang S Chen F Lin QH Pan 2005 Genetic and physical mapping of Pi36(t), a novel rice blast resistance gene located on rice chromosome 8 Mol Genet Genomics 274 394 401
23. XQ Liu F Lin L Wang QH Pan 2007 The in silico map-based cloning of Pi36, a rice CC-NBS-LRR gene which confers race-specific resistance to the blast fungus Genetics 176 2541 2549
24. GB Martin AJ Bogdanove G Sessa 2003 Understanding the functions of plant disease resistance proteins Annu Rev Plant Biol 54 23 61
25. SR McCouch L Teytelman YB Xu KB Lobos K Clare M Walton BY Fu R Maghirang ZK Li YZ Xing QF Zhang I Kono M Yano R Fjellstrom G Declerck D Schneider S Cartinhour D Ware L Stein 2002 Development and mapping of 2240 new SSR markers for rice (Oryza sativa L.) DNA Res 9 199 207
26. RW Michelmore BC Meyers 1998 Clusters of resistance genes in plants evolve by divergent selection and a birth-and death process Genome Res 8 1113 1130
27. RW Michelmore I Paran RV Kesseli 1991 Identification of markers linked to disease-resistance genes by bulked segregant analysis: a rapid method to detect markers in specific genomic regions by using segregating populations Proc Natl Acad Sci USA 88 9828 9832
28. B Monosi RJ Wisser L Pennill SH Hulbert 2004 Full-genome analysis of resistance gene homologues in rice Theor Appl Genet 109 1434 1447
29. MG Murray WK Thompson 1980 Rapid isolation of high molecular-weight plant DNA Nucleic Acids Res 8 4321 4325
30. Naqvi NI, Chattoo BB (1996) Molecular genetic analysis and sequence characterized amplified region-assisted selection of blast resistance in rice. In: Khush GS (ed) Rice genetics III. IRRI, Manila, pp 570-576
31. TTT Nguyen S Koizumi TN La KS Zenbayashi T Ashizaka N Yasuda I Imazaki A Miyasaka 2006 Pi35(t), a new gene conferring partial resistance to leaf blast in the rice cultivar Hokkai 188 Theor Appl Genet 113 697 704
32. Ou SH (1985) Rice diseases, 2nd edn. Commonwealth Mycological Institute, Kew, pp 109-201
33. QH Pan ZD Hu T Tanisaka L Wang 2003 Fine mapping of the blast resistance gene Pi15, linked to Pii, on rice chromosome 9 Acta Bot Sin 45 871 877
34. S Qu G Liu B Zhou M Bellizzi L Zeng L Dai B Han GL Wang 2006 The broad-spectrum blast resistance gene Pi9 encodes a nucleotide-binding site-leucine-rich repeat protein and is a member of a multigene family in rice Genetics 172 1901 1914
35. 2 and Pita and a consideration of their origin Mol Plant Microbe Interact 10 517 524
36. T Sakaki T Matsumoto BA Antonio Y Nagamura 2005 From mapping to sequencing, post-sequencing and beyond Plant Cell Physiol 46 3 13
37. C Sallaud M Lorieux E Roumen D Tharreau R Berruyer P Svestasrani O Garsmeur A Ghesquiere JL Notteghem 2003 Identification of five new blast resistance genes in the highly blast-resistant rice variety IR64 using a QTL mapping strategy Theor Appl Genet 106 794 803
38. D Silué JL Notteghem D Tharreau 1992 Evidence of a gene for-gene relationship in the Oryza sativa-Magnaporthe grisea pathosystem Phytopathology 82 577 580
39. RE Tabien Z Li AH Paterson MA Marchetti JW Stansel SRM Pinson 2000 Mapping of four major rice blast resistance genes from 'Lemont' and 'Teqing' and evaluation of their combinatorial effect for field resistance Theor Appl Genet 101 1215 1225
40. The Rice Chromosomes 11 and 12 Sequencing Consortia 2005 The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications BMC Biol 3 20
41. B Valent 1990 Rice blast as a model system for plant pathology Phytopathology 80 33 36
42. ZX Wang M Yano U Yamanouchi M Iwamoto L Monna H Hayasaka Y Katayose T Sasaki 1999 The Pib gene for rice blast resistance belongs to the nucleotide binding and leucine-rich repeat class of plant disease resistance genes Plant J 19 55 64
43. KS Wu SD Tanksley 1993 PFGE analysis of the rice genome: estimation of the fragment sizes, organization of the repetitive sequences and relationships between genetic and physical distances Plant Mol Biol 23 243 254
44. JZ Wu H Mizuno M Hayshi-Tsugane Y Ito Y Chiden M Fujisawa S Katagiri S Saji S Yoshiki W Karasawa R Yoshihara A Hayashi H Hobayashi K Ito M Hamada M Okamoto M Ikeno Y Ichikawa Y Katayose M Yano T Matsumoto T Sasaki 2003 Physical maps and recombination frequence of six rice chromosomes Plant J 36 720 730
45. BBH Wulff CM Thomas M Parniske JDG Jones 2004 Genetic variation at the tomato Cf-4/Cf-9 locus induced by EMS mutagenesis and intralocus recombination Genetics 167 459 470
46. YB Xu SR McCouch QF Zhang 2005 How can we use genomics to improve cereals with rice as a reference genome? Plant Mol Biol 59 7 26
47. H Yao Q Zhou J Li H Smith M Yandeau BJ Nikolau PS Schnable 2002 Molecular characterization of meiotic recombination across the 140-kb multigenic a1-sh2 interval of maize Proc Natl Acad Sci USA 99 6157 6162
48. ZH Yu DJ Mackill JM Bonman SD Tanksley 1991 Tagging genes for blast resistance in rice via linkage to RFLP markers Theor Appl Genet 81 471 476
49. ZH Yu DJ Mackill JM Bonman SR McCouch E Guiderdoni JL Notteghem SD Tanksley 1996 Molecular mapping of genes for resistance to rice blast (Pyricularia grisea Sacc.) Theor Appl Genet 93 859 863
50. J Yu SN Hu J Wang 2002 A draft sequence of the rice genome (Oryza sativa L. ssp. indica) Science 296 79 92
51. Zheng KL, Zhuang JY, Lu J, Qian HR, Lin HX (1996) Identification of DNA markers tightly linked to blast resistance genes in rice. In: Khush GS (ed) Rice genetics III. IRRI, Manila, pp 565-569
52. B Zhou S Qu G Liu M Dolan H Sakai G Lu M Bellizzi GL Wang 2006 The eight amino-acid differences within three leucine-rich repeats between Pi2 and Piz-t resistance proteins determine the resistance specificity to Magnaporthe grisea Mol Plant Microbe Interact 19 1216 1228
53. ML Zhu L Wang QH Pan 2004 Identification and characterization of a new blast resistance gene located on rice chromosome 1 through linkage and differential analyses Phytopathology 94 515 519
54. JY Zhuang WB Ma JL Wu RY Chai J Lu YY Fan MZ Jin H Leung KL Zheng 2002 Mapping of leaf and neck blast resistance genes with resistance gene analog, RAPD and RFLP in rice Euphytica 128 363 370